Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS16540

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
3,642,230	+		LRK53_RS16530	0.72	-1.2
3,642,230	+		LRK53_RS16530	0.72	-0.2
3,642,230	+		LRK53_RS16530	0.72	-1.2
3,642,230	+		LRK53_RS16530	0.72	-0.8
3,642,230	+		LRK53_RS16530	0.72	-0.5
3,642,230	+		LRK53_RS16530	0.72	-1.4
3,642,230	+		LRK53_RS16530	0.72	+4.2
3,642,231	-		LRK53_RS16530	0.72	+0.4
3,642,231	-		LRK53_RS16530	0.72	+2.4
3,642,231	-		LRK53_RS16530	0.72	-0.2
3,642,272	+		LRK53_RS16530	0.77	+2.4
3,642,273	-		LRK53_RS16530	0.77	+0.6
3,642,273	-		LRK53_RS16530	0.77	+1.0
3,642,339	-		LRK53_RS16530	0.84	-0.1
3,642,339	-		LRK53_RS16530	0.84	+0.9
3,642,339	-		LRK53_RS16530	0.84	+0.3
3,642,374	+		LRK53_RS16530	0.88	-0.0
3,642,374	+		LRK53_RS16530	0.88	-1.0
3,642,374	+		LRK53_RS16530	0.88	-2.4
3,642,374	+		LRK53_RS16530	0.88	+2.4
3,642,374	+		LRK53_RS16530	0.88	+0.4
3,642,374	+		LRK53_RS16530	0.88	+0.4
3,642,374	+		LRK53_RS16530	0.88	-1.4
3,642,374	+		LRK53_RS16530	0.88	-0.1
3,642,374	+		LRK53_RS16530	0.88	-0.2
3,642,375	-		LRK53_RS16530	0.88	-0.6
3,642,375	-		LRK53_RS16530	0.88	-0.4
3,642,375	-		LRK53_RS16530	0.88	-1.2
3,642,375	-		LRK53_RS16530	0.88	-1.0
3,642,375	-		LRK53_RS16530	0.88	+0.4
3,642,375	-		LRK53_RS16530	0.88	-0.5
3,642,375	-		LRK53_RS16530	0.88	-0.1
3,642,375	-		LRK53_RS16530	0.88	-2.3
3,642,375	-		LRK53_RS16530	0.88	+0.5
3,642,449	+				-1.0
3,642,449	+				-0.6
3,642,449	+				-1.0
3,642,449	+				+0.0
3,642,450	-				+0.4
3,642,450	-				+0.8
3,642,537	+				-1.8
3,642,537	+				-0.8
3,642,537	+				-0.1
3,642,537	+				-2.8
3,642,537	+				+0.8
3,642,537	+				-1.6
3,642,537	+				+0.1
3,642,537	+				+1.4
3,642,537	+				+0.7
3,642,537	+				-1.6
3,642,537	+				-0.0
3,642,537	+				+1.4
3,642,537	+				-0.4
3,642,538	-				-1.1
3,642,538	-				-0.1
3,642,538	-				+1.4
3,642,538	-				-0.6
3,642,538	-				+0.8
3,642,538	-				-1.1
3,642,538	-				+0.5
3,642,538	-				-0.1
3,642,538	-				+0.1
3,642,607	+		LRK53_RS16535	0.24	-0.6
3,642,607	+		LRK53_RS16535	0.24	+1.4
3,642,607	+		LRK53_RS16535	0.24	-0.8
3,642,607	+		LRK53_RS16535	0.24	+0.0
3,642,607	+		LRK53_RS16535	0.24	-0.2
3,642,607	+		LRK53_RS16535	0.24	+1.1
3,642,607	+		LRK53_RS16535	0.24	+0.3
3,642,607	+		LRK53_RS16535	0.24	+1.1
3,642,607	+		LRK53_RS16535	0.24	+0.1
3,642,607	+		LRK53_RS16535	0.24	-1.2
3,642,607	+		LRK53_RS16535	0.24	-0.0
3,642,607	+		LRK53_RS16535	0.24	+0.9
3,642,607	+		LRK53_RS16535	0.24	-1.6
3,642,607	+		LRK53_RS16535	0.24	+0.0
3,642,607	+		LRK53_RS16535	0.24	+0.5
3,642,607	+		LRK53_RS16535	0.24	-1.8
3,642,607	+		LRK53_RS16535	0.24	+2.0
3,642,607	+		LRK53_RS16535	0.24	-2.7
3,642,607	+		LRK53_RS16535	0.24	+2.0
3,642,607	+		LRK53_RS16535	0.24	+0.2
3,642,607	+		LRK53_RS16535	0.24	-1.4
3,642,607	+		LRK53_RS16535	0.24	-1.0
3,642,607	+		LRK53_RS16535	0.24	+1.1
3,642,607	+		LRK53_RS16535	0.24	+0.8
3,642,607	+		LRK53_RS16535	0.24	-0.7
3,642,607	+		LRK53_RS16535	0.24	-0.6
3,642,607	+		LRK53_RS16535	0.24	+0.8
3,642,607	+		LRK53_RS16535	0.24	-0.2
3,642,608	-		LRK53_RS16535	0.24	+0.8
3,642,608	-		LRK53_RS16535	0.24	-3.3
3,642,608	-		LRK53_RS16535	0.24	-0.2
3,642,608	-		LRK53_RS16535	0.24	-0.4
3,642,608	-		LRK53_RS16535	0.24	-2.0
3,642,608	-		LRK53_RS16535	0.24	-0.6
3,642,608	-		LRK53_RS16535	0.24	-0.5
3,642,608	-		LRK53_RS16535	0.24	+1.0
3,642,608	-		LRK53_RS16535	0.24	-1.6
3,642,608	-		LRK53_RS16535	0.24	-0.2
3,642,608	-		LRK53_RS16535	0.24	-0.6
3,642,608	-		LRK53_RS16535	0.24	-2.1
3,642,608	-		LRK53_RS16535	0.24	+1.4
3,642,608	-		LRK53_RS16535	0.24	-1.0
3,642,608	-		LRK53_RS16535	0.24	+0.2
3,642,608	-		LRK53_RS16535	0.24	+2.4
3,642,608	-		LRK53_RS16535	0.24	-0.6
3,642,608	-		LRK53_RS16535	0.24	-0.3
3,642,608	-		LRK53_RS16535	0.24	+0.1
3,642,608	-		LRK53_RS16535	0.24	+0.1
3,642,608	-		LRK53_RS16535	0.24	+0.6
3,642,608	-		LRK53_RS16535	0.24	-0.0
3,642,608	-		LRK53_RS16535	0.24	+0.4
3,642,608	-		LRK53_RS16535	0.24	-1.6
3,642,608	-		LRK53_RS16535	0.24	-0.2
3,642,608	-		LRK53_RS16535	0.24	-0.1
3,642,608	-		LRK53_RS16535	0.24	-0.6
3,642,608	-		LRK53_RS16535	0.24	-2.1
3,642,608	-		LRK53_RS16535	0.24	+2.1
3,642,608	-		LRK53_RS16535	0.24	-0.9
3,642,608	-		LRK53_RS16535	0.24	-1.0
3,642,608	-		LRK53_RS16535	0.24	+0.6
3,642,608	-		LRK53_RS16535	0.24	-1.6
3,642,608	-		LRK53_RS16535	0.24	-1.9
3,642,608	-		LRK53_RS16535	0.24	-1.0
3,642,608	-		LRK53_RS16535	0.24	-0.2
3,642,608	-		LRK53_RS16535	0.24	-2.3
3,642,608	-		LRK53_RS16535	0.24	-0.1
3,642,608	-		LRK53_RS16535	0.24	+0.8
3,642,608	-		LRK53_RS16535	0.24	-0.5
3,642,608	-		LRK53_RS16535	0.24	-0.0
3,642,608	-		LRK53_RS16535	0.24	-0.3
3,642,608	-		LRK53_RS16535	0.24	-0.8
3,642,608	-		LRK53_RS16535	0.24	-0.5
3,642,662	+		LRK53_RS16535	0.36	-0.4
3,642,662	+		LRK53_RS16535	0.36	-1.0
3,642,662	+		LRK53_RS16535	0.36	+0.3
3,642,662	+		LRK53_RS16535	0.36	-0.4
3,642,662	+		LRK53_RS16535	0.36	+1.0
3,642,662	+		LRK53_RS16535	0.36	+0.3
3,642,662	+		LRK53_RS16535	0.36	-0.6
3,642,662	+		LRK53_RS16535	0.36	+0.1
3,642,662	+		LRK53_RS16535	0.36	+1.4
3,642,662	+		LRK53_RS16535	0.36	-0.6
3,642,663	-		LRK53_RS16535	0.36	-0.2
3,642,663	-		LRK53_RS16535	0.36	+0.5
3,642,663	-		LRK53_RS16535	0.36	+0.7
3,642,663	-		LRK53_RS16535	0.36	+0.5
3,642,663	-		LRK53_RS16535	0.36	+0.5
3,642,663	-		LRK53_RS16535	0.36	-1.2
3,642,663	-		LRK53_RS16535	0.36	-1.2
3,642,663	-		LRK53_RS16535	0.36	+3.0
3,642,663	-		LRK53_RS16535	0.36	+1.7
3,642,663	-		LRK53_RS16535	0.36	-0.6
3,642,663	-		LRK53_RS16535	0.36	-1.2
3,642,663	-		LRK53_RS16535	0.36	-0.1
3,642,663	-		LRK53_RS16535	0.36	-1.4
3,642,663	-		LRK53_RS16535	0.36	+1.4
3,642,663	-		LRK53_RS16535	0.36	-0.6
3,642,663	-		LRK53_RS16535	0.36	+0.5
3,642,663	-		LRK53_RS16535	0.36	-0.5
3,642,663	-		LRK53_RS16535	0.36	+0.1
3,642,829	+		LRK53_RS16535	0.72	+0.5
3,642,961	+				-0.5
3,642,961	+				-0.8
3,642,961	+				+0.4
3,642,962	-				+0.4
3,643,025	+		LRK53_RS16540	0.45	+0.4
3,643,025	+		LRK53_RS16540	0.45	-0.6
3,643,025	+		LRK53_RS16540	0.45	+0.1
3,643,025	+		LRK53_RS16540	0.45	-0.5
3,643,025	+		LRK53_RS16540	0.45	-1.4
3,643,026	-		LRK53_RS16540	0.46	-0.6
3,643,026	-		LRK53_RS16540	0.46	-0.7
3,643,026	-		LRK53_RS16540	0.46	-1.6
3,643,026	-		LRK53_RS16540	0.46	-0.2
3,643,026	-		LRK53_RS16540	0.46	-2.1
3,643,038	+		LRK53_RS16540	0.62	-1.4
3,643,038	+		LRK53_RS16540	0.62	-0.8
3,643,038	+		LRK53_RS16540	0.62	+0.0
3,643,038	+		LRK53_RS16540	0.62	-0.1
3,643,038	+		LRK53_RS16540	0.62	-1.0
3,643,038	+		LRK53_RS16540	0.62	+1.2
3,643,038	+		LRK53_RS16540	0.62	-1.2
3,643,039	-		LRK53_RS16540	0.64	-1.0
3,643,039	-		LRK53_RS16540	0.64	-0.0
3,643,039	-		LRK53_RS16540	0.64	+0.6
3,643,039	-		LRK53_RS16540	0.64	-1.4
3,643,039	-		LRK53_RS16540	0.64	-0.9
3,643,039	-		LRK53_RS16540	0.64	+1.4
3,643,039	-		LRK53_RS16540	0.64	-0.5
3,643,039	-		LRK53_RS16540	0.64	-1.2
3,643,039	-		LRK53_RS16540	0.64	+1.4
3,643,039	-		LRK53_RS16540	0.64	-0.6
3,643,039	-		LRK53_RS16540	0.64	-3.2
3,643,039	-		LRK53_RS16540	0.64	+4.0
3,643,046	+		LRK53_RS16540	0.73	-0.4
3,643,046	+		LRK53_RS16540	0.73	-2.2
3,643,046	+		LRK53_RS16540	0.73	-0.6
3,643,046	+		LRK53_RS16540	0.73	+1.0
3,643,046	+		LRK53_RS16540	0.73	-1.4
3,643,047	-		LRK53_RS16540	0.74	-1.1
3,643,047	-		LRK53_RS16540	0.74	-1.3
3,643,047	-		LRK53_RS16540	0.74	+1.4
3,643,047	-		LRK53_RS16540	0.74	-2.5
3,643,047	-		LRK53_RS16540	0.74	+0.4
3,643,057	+		LRK53_RS16540	0.88	-0.2
3,643,058	-				-1.6
3,643,058	-				+0.0
3,643,462	+				+0.2
3,643,462	+				+0.4
3,643,462	+				+0.4
3,643,462	+				-0.6
3,643,462	+				+0.6
3,643,462	+				+0.6
3,643,462	+				-0.0
3,643,462	+				+0.1
3,643,462	+				-1.1
3,643,463	-				+1.4
3,643,463	-				+0.4
3,643,463	-				-0.2
3,643,463	-				-1.7
3,643,463	-				-0.5
3,643,463	-				-2.0
3,643,463	-				-1.4
3,643,463	-				-0.3
3,643,463	-				+0.4
3,643,463	-				+1.4
3,643,636	+				+1.4
3,643,636	+				-1.4
3,643,636	+				-0.8
3,643,636	+				+0.6
3,643,636	+				-0.2
3,643,636	+				-0.6
3,643,636	+				+0.3
3,643,637	-				+0.3
3,643,637	-				+0.4
3,643,637	-				-1.1
3,643,637	-				+1.4
3,643,637	-				+0.1
3,643,637	-				+0.0
3,643,637	-				+0.4
3,643,637	-				-1.5
3,643,637	-				+0.4
3,643,637	-				-0.4
3,643,897	+		LRK53_RS16545	0.18	+1.4
3,643,897	+		LRK53_RS16545	0.18	+0.4
3,643,897	+		LRK53_RS16545	0.18	-0.0
3,643,897	+		LRK53_RS16545	0.18	-1.0
3,643,898	-		LRK53_RS16545	0.18	+0.4
3,644,062	+		LRK53_RS16545	0.25	-0.6
3,644,062	+		LRK53_RS16545	0.25	-0.6
3,644,062	+		LRK53_RS16545	0.25	+0.4
3,644,062	+		LRK53_RS16545	0.25	+1.1
3,644,062	+		LRK53_RS16545	0.25	-1.2
3,644,062	+		LRK53_RS16545	0.25	+1.4
3,644,062	+		LRK53_RS16545	0.25	+0.7
3,644,062	+		LRK53_RS16545	0.25	-0.7
3,644,062	+		LRK53_RS16545	0.25	-0.0
3,644,062	+		LRK53_RS16545	0.25	+0.2
3,644,062	+		LRK53_RS16545	0.25	-0.6
3,644,063	-		LRK53_RS16545	0.26	-1.2
3,644,063	-		LRK53_RS16545	0.26	-0.4
3,644,063	-		LRK53_RS16545	0.26	-0.0
3,644,063	-		LRK53_RS16545	0.26	+0.4
3,644,063	-		LRK53_RS16545	0.26	-0.4
3,644,063	-		LRK53_RS16545	0.26	+1.1
3,644,063	-		LRK53_RS16545	0.26	-0.6
3,644,063	-		LRK53_RS16545	0.26	-1.4