Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS16075

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
3,530,329	+		LRK53_RS16070	0.43	-0.2
3,530,781	+		LRK53_RS16070	0.75	+2.5
3,530,781	+		LRK53_RS16070	0.75	+1.2
3,530,781	+		LRK53_RS16070	0.75	-0.4
3,530,782	-		LRK53_RS16070	0.75	-0.5
3,530,782	-		LRK53_RS16070	0.75	-1.3
3,530,800	+		LRK53_RS16070	0.76	+0.2
3,530,800	+		LRK53_RS16070	0.76	-0.5
3,530,800	+		LRK53_RS16070	0.76	-0.2
3,530,800	+		LRK53_RS16070	0.76	-0.2
3,530,801	-		LRK53_RS16070	0.76	-0.2
3,530,801	-		LRK53_RS16070	0.76	+0.0
3,530,801	-		LRK53_RS16070	0.76	+1.1
3,530,801	-		LRK53_RS16070	0.76	-1.1
3,530,801	-		LRK53_RS16070	0.76	+0.9
3,530,801	-		LRK53_RS16070	0.76	+0.8
3,530,801	-		LRK53_RS16070	0.76	+0.2
3,530,801	-		LRK53_RS16070	0.76	+1.6
3,530,801	-		LRK53_RS16070	0.76	-0.8
3,530,801	-		LRK53_RS16070	0.76	-1.3
3,530,801	-		LRK53_RS16070	0.76	-0.5
3,530,881	+		LRK53_RS16070	0.82	+0.4
3,530,881	+		LRK53_RS16070	0.82	-0.4
3,530,882	-		LRK53_RS16070	0.82	-2.0
3,530,882	-		LRK53_RS16070	0.82	-0.8
3,530,882	-		LRK53_RS16070	0.82	-2.6
3,530,882	-		LRK53_RS16070	0.82	-1.6
3,531,214	+				-0.5
3,531,214	+				-1.4
3,531,215	-				-0.9
3,531,215	-				+0.3
3,531,215	-				+0.6
3,531,216	+				+0.9
3,531,216	+				-2.0
3,531,216	+				-0.9
3,531,216	+				+2.2
3,531,216	+				-0.4
3,531,216	+				+0.8
3,531,217	-				+1.9
3,531,217	-				+1.2
3,531,217	-				+0.6
3,531,217	-				+1.2
3,531,217	-				-0.7
3,531,248	-				-0.6
3,531,281	+				+1.0
3,531,281	+				+1.8
3,531,281	+				-0.1
3,531,281	+				-2.0
3,531,281	+				+0.5
3,531,282	-				-1.3
3,531,282	-				-0.0
3,531,497	+		LRK53_RS16075	0.37	+0.2
3,531,497	+		LRK53_RS16075	0.37	+1.5
3,531,497	+		LRK53_RS16075	0.37	-0.4
3,531,497	+		LRK53_RS16075	0.37	-1.2
3,531,497	+		LRK53_RS16075	0.37	-1.1
3,531,497	+		LRK53_RS16075	0.37	-0.8
3,531,497	+		LRK53_RS16075	0.37	+1.8
3,531,497	+		LRK53_RS16075	0.37	-2.3
3,531,497	+		LRK53_RS16075	0.37	-0.1
3,531,497	+		LRK53_RS16075	0.37	+1.1
3,531,497	+		LRK53_RS16075	0.37	-0.6
3,531,497	+		LRK53_RS16075	0.37	-1.1
3,531,497	+		LRK53_RS16075	0.37	-0.4
3,531,497	+		LRK53_RS16075	0.37	+0.2
3,531,497	+		LRK53_RS16075	0.37	-0.9
3,531,497	+		LRK53_RS16075	0.37	+0.6
3,531,498	-		LRK53_RS16075	0.37	-0.0
3,531,498	-		LRK53_RS16075	0.37	-0.4
3,531,498	-		LRK53_RS16075	0.37	-1.1
3,531,498	-		LRK53_RS16075	0.37	+0.6
3,531,498	-		LRK53_RS16075	0.37	+0.4
3,531,498	-		LRK53_RS16075	0.37	-0.8
3,531,498	-		LRK53_RS16075	0.37	-0.8
3,531,498	-		LRK53_RS16075	0.37	+1.0
3,531,498	-		LRK53_RS16075	0.37	-0.0
3,531,498	-		LRK53_RS16075	0.37	-0.3
3,531,498	-		LRK53_RS16075	0.37	+0.2
3,531,498	-		LRK53_RS16075	0.37	+0.6
3,531,498	-		LRK53_RS16075	0.37	+0.6
3,531,498	-		LRK53_RS16075	0.37	+0.7
3,531,571	+		LRK53_RS16075	0.53	+0.5
3,531,620	+		LRK53_RS16075	0.63	-1.2
3,531,620	+		LRK53_RS16075	0.63	-0.8
3,531,620	+		LRK53_RS16075	0.63	+3.8
3,531,621	-		LRK53_RS16075	0.63	+1.8
3,531,740	+		LRK53_RS16075	0.88	+0.4
3,531,740	+		LRK53_RS16075	0.88	-0.7
3,531,740	+		LRK53_RS16075	0.88	-0.4
3,531,740	+		LRK53_RS16075	0.88	+0.4
3,531,740	+		LRK53_RS16075	0.88	-0.4
3,531,740	+		LRK53_RS16075	0.88	+3.2
3,531,741	-		LRK53_RS16075	0.88	+0.1
3,531,741	-		LRK53_RS16075	0.88	+1.5
3,531,741	-		LRK53_RS16075	0.88	+1.2
3,531,741	-		LRK53_RS16075	0.88	-2.6
3,531,755	+				+0.4
3,531,955	+		LRK53_RS16080	0.12	-0.4
3,531,955	+		LRK53_RS16080	0.12	-2.7
3,531,955	+		LRK53_RS16080	0.12	+2.2
3,531,955	+		LRK53_RS16080	0.12	-3.0
3,531,955	+		LRK53_RS16080	0.12	-0.8
3,531,955	+		LRK53_RS16080	0.12	-0.0
3,531,955	+		LRK53_RS16080	0.12	+0.7
3,531,955	+		LRK53_RS16080	0.12	+0.2
3,531,955	+		LRK53_RS16080	0.12	-1.3
3,531,955	+		LRK53_RS16080	0.12	-0.5
3,531,955	+		LRK53_RS16080	0.12	-0.3
3,531,955	+		LRK53_RS16080	0.12	-0.3
3,531,955	+		LRK53_RS16080	0.12	+0.2
3,531,955	+		LRK53_RS16080	0.12	-1.1
3,531,955	+		LRK53_RS16080	0.12	-1.4
3,531,955	+		LRK53_RS16080	0.12	-1.5
3,531,955	+		LRK53_RS16080	0.12	+1.2
3,531,955	+		LRK53_RS16080	0.12	+0.4
3,531,955	+		LRK53_RS16080	0.12	-2.8
3,531,955	+		LRK53_RS16080	0.12	+2.3
3,531,956	-		LRK53_RS16080	0.13	+1.2
3,531,956	-		LRK53_RS16080	0.13	-0.0
3,531,956	-		LRK53_RS16080	0.13	-1.4
3,531,956	-		LRK53_RS16080	0.13	-0.8
3,531,956	-		LRK53_RS16080	0.13	-0.6
3,531,956	-		LRK53_RS16080	0.13	-0.0
3,531,956	-		LRK53_RS16080	0.13	-1.6
3,531,956	-		LRK53_RS16080	0.13	-1.4
3,531,956	-		LRK53_RS16080	0.13	-1.9
3,531,956	-		LRK53_RS16080	0.13	-1.1
3,531,956	-		LRK53_RS16080	0.13	-0.5
3,531,956	-		LRK53_RS16080	0.13	-0.0
3,531,956	-		LRK53_RS16080	0.13	-0.8
3,531,956	-		LRK53_RS16080	0.13	-2.0
3,532,273	+		LRK53_RS16080	0.53	+0.6
3,532,273	+		LRK53_RS16080	0.53	+0.1
3,532,369	+		LRK53_RS16080	0.65	-0.4
3,532,369	+		LRK53_RS16080	0.65	+0.1
3,532,369	+		LRK53_RS16080	0.65	-0.2
3,532,369	+		LRK53_RS16080	0.65	+0.7
3,532,369	+		LRK53_RS16080	0.65	-1.5
3,532,369	+		LRK53_RS16080	0.65	+1.4
3,532,369	+		LRK53_RS16080	0.65	+0.4
3,532,369	+		LRK53_RS16080	0.65	+0.8
3,532,369	+		LRK53_RS16080	0.65	+0.1
3,532,369	+		LRK53_RS16080	0.65	+0.0
3,532,369	+		LRK53_RS16080	0.65	-1.6
3,532,369	+		LRK53_RS16080	0.65	+0.6
3,532,369	+		LRK53_RS16080	0.65	-0.2
3,532,369	+		LRK53_RS16080	0.65	-0.8
3,532,369	+		LRK53_RS16080	0.65	-0.4
3,532,369	+		LRK53_RS16080	0.65	+0.6
3,532,369	+		LRK53_RS16080	0.65	+1.0
3,532,369	+		LRK53_RS16080	0.65	-0.8
3,532,369	+		LRK53_RS16080	0.65	+0.3
3,532,369	+		LRK53_RS16080	0.65	+1.2
3,532,369	+		LRK53_RS16080	0.65	+2.2
3,532,369	+		LRK53_RS16080	0.65	+0.2
3,532,369	+		LRK53_RS16080	0.65	-0.5
3,532,369	+		LRK53_RS16080	0.65	-0.8
3,532,369	+		LRK53_RS16080	0.65	+2.5
3,532,369	+		LRK53_RS16080	0.65	+0.7
3,532,369	+		LRK53_RS16080	0.65	-0.2
3,532,369	+		LRK53_RS16080	0.65	+0.0
3,532,370	-		LRK53_RS16080	0.65	-0.2
3,532,370	-		LRK53_RS16080	0.65	-1.1
3,532,370	-		LRK53_RS16080	0.65	-1.6
3,532,370	-		LRK53_RS16080	0.65	+0.9
3,532,370	-		LRK53_RS16080	0.65	-2.1
3,532,370	-		LRK53_RS16080	0.65	+0.2
3,532,370	-		LRK53_RS16080	0.65	-1.0
3,532,370	-		LRK53_RS16080	0.65	-1.6
3,532,370	-		LRK53_RS16080	0.65	-0.8
3,532,370	-		LRK53_RS16080	0.65	-0.9
3,532,370	-		LRK53_RS16080	0.65	-2.1
3,532,370	-		LRK53_RS16080	0.65	-1.8
3,532,370	-		LRK53_RS16080	0.65	+0.3
3,532,370	-		LRK53_RS16080	0.65	-2.3
3,532,370	-		LRK53_RS16080	0.65	-0.8
3,532,370	-		LRK53_RS16080	0.65	-0.4
3,532,370	-		LRK53_RS16080	0.65	-0.5
3,532,370	-		LRK53_RS16080	0.65	-1.1
3,532,370	-		LRK53_RS16080	0.65	-1.6
3,532,370	-		LRK53_RS16080	0.65	-0.6
3,532,370	-		LRK53_RS16080	0.65	-1.4
3,532,370	-		LRK53_RS16080	0.65	-0.7
3,532,370	-		LRK53_RS16080	0.65	-0.8
3,532,370	-		LRK53_RS16080	0.65	-1.6
3,532,370	-		LRK53_RS16080	0.65	-1.3
3,532,370	-		LRK53_RS16080	0.65	+0.8
3,532,370	-		LRK53_RS16080	0.65	-0.2
3,532,370	-		LRK53_RS16080	0.65	+0.5
3,532,370	-		LRK53_RS16080	0.65	+0.0
3,532,370	-		LRK53_RS16080	0.65	-0.1
3,532,370	-		LRK53_RS16080	0.65	+0.4
3,532,370	-		LRK53_RS16080	0.65	-1.3
3,532,370	-		LRK53_RS16080	0.65	+0.3
3,532,370	-		LRK53_RS16080	0.65	-0.6
3,532,370	-		LRK53_RS16080	0.65	-2.4
3,532,370	-		LRK53_RS16080	0.65	-0.3
3,532,370	-		LRK53_RS16080	0.65	-0.8
3,532,370	-		LRK53_RS16080	0.65	-0.6
3,532,370	-		LRK53_RS16080	0.65	-1.8
3,532,370	-		LRK53_RS16080	0.65	-1.1
3,532,370	-		LRK53_RS16080	0.65	+1.2
3,532,370	-		LRK53_RS16080	0.65	-0.8
3,532,370	-		LRK53_RS16080	0.65	-0.4
3,532,370	-		LRK53_RS16080	0.65	-1.6
3,532,405	+		LRK53_RS16080	0.70	-1.2
3,532,405	+		LRK53_RS16080	0.70	-0.3
3,532,405	+		LRK53_RS16080	0.70	+0.6
3,532,405	+		LRK53_RS16080	0.70	-0.7
3,532,406	-		LRK53_RS16080	0.70	-0.5
3,532,406	-		LRK53_RS16080	0.70	-2.8
3,532,406	-		LRK53_RS16080	0.70	-1.6
3,532,406	-		LRK53_RS16080	0.70	-2.0
3,532,406	-		LRK53_RS16080	0.70	-1.1
3,532,406	-		LRK53_RS16080	0.70	-0.1
3,532,621	+				+1.5
3,532,621	+				-2.0
3,532,622	-				+2.2
3,532,622	-				-1.8
3,532,622	-				-1.1
3,532,727	+				+0.2
3,532,727	+				-0.8
3,532,727	+				+1.2
3,532,727	+				-0.6
3,532,727	+				+0.2
3,532,727	+				-2.6
3,532,728	-				-0.2
3,532,728	-				-0.5
3,532,728	-				-0.3
3,532,728	-				+1.6
3,532,728	-				-0.9