Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS15830

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
3,458,949	-				-0.1
3,459,006	+		LRK53_RS15825	0.14	+2.0
3,459,090	+		LRK53_RS15825	0.22	-0.3
3,459,090	+		LRK53_RS15825	0.22	-0.1
3,459,090	+		LRK53_RS15825	0.22	+1.2
3,459,090	+		LRK53_RS15825	0.22	-1.6
3,459,090	+		LRK53_RS15825	0.22	+1.0
3,459,090	+		LRK53_RS15825	0.22	-0.6
3,459,090	+		LRK53_RS15825	0.22	-0.4
3,459,090	+		LRK53_RS15825	0.22	-0.5
3,459,090	+		LRK53_RS15825	0.22	+0.7
3,459,090	+		LRK53_RS15825	0.22	+0.4
3,459,090	+		LRK53_RS15825	0.22	-0.7
3,459,090	+		LRK53_RS15825	0.22	-0.7
3,459,090	+		LRK53_RS15825	0.22	-0.4
3,459,090	+		LRK53_RS15825	0.22	-1.2
3,459,090	+		LRK53_RS15825	0.22	-0.7
3,459,090	+		LRK53_RS15825	0.22	-1.0
3,459,090	+		LRK53_RS15825	0.22	+2.8
3,459,090	+		LRK53_RS15825	0.22	+0.4
3,459,090	+		LRK53_RS15825	0.22	+1.2
3,459,090	+		LRK53_RS15825	0.22	-0.6
3,459,090	+		LRK53_RS15825	0.22	-0.1
3,459,090	+		LRK53_RS15825	0.22	-1.1
3,459,090	+		LRK53_RS15825	0.22	-1.1
3,459,090	+		LRK53_RS15825	0.22	+0.2
3,459,091	-		LRK53_RS15825	0.22	-1.6
3,459,091	-		LRK53_RS15825	0.22	-0.4
3,459,091	-		LRK53_RS15825	0.22	-0.9
3,459,091	-		LRK53_RS15825	0.22	-1.9
3,459,091	-		LRK53_RS15825	0.22	+0.8
3,459,091	-		LRK53_RS15825	0.22	-1.9
3,459,091	-		LRK53_RS15825	0.22	+1.2
3,459,091	-		LRK53_RS15825	0.22	-1.1
3,459,091	-		LRK53_RS15825	0.22	-1.4
3,459,091	-		LRK53_RS15825	0.22	-1.1
3,459,091	-		LRK53_RS15825	0.22	-0.9
3,459,091	-		LRK53_RS15825	0.22	+0.1
3,459,091	-		LRK53_RS15825	0.22	+1.2
3,459,091	-		LRK53_RS15825	0.22	-0.6
3,459,091	-		LRK53_RS15825	0.22	+3.8
3,459,091	-		LRK53_RS15825	0.22	-0.1
3,459,091	-		LRK53_RS15825	0.22	-1.8
3,459,091	-		LRK53_RS15825	0.22	-0.7
3,459,091	-		LRK53_RS15825	0.22	-1.2
3,459,091	-		LRK53_RS15825	0.22	+0.2
3,459,091	-		LRK53_RS15825	0.22	-1.1
3,459,091	-		LRK53_RS15825	0.22	-0.5
3,459,091	-		LRK53_RS15825	0.22	-1.4
3,459,091	-		LRK53_RS15825	0.22	-0.8
3,459,091	-		LRK53_RS15825	0.22	+1.5
3,459,091	-		LRK53_RS15825	0.22	-0.2
3,459,091	-		LRK53_RS15825	0.22	-0.5
3,459,166	-		LRK53_RS15825	0.30	-0.9
3,459,166	-		LRK53_RS15825	0.30	-0.7
3,459,252	+		LRK53_RS15825	0.39	-0.8
3,459,441	+		LRK53_RS15825	0.59	-1.8
3,459,441	+		LRK53_RS15825	0.59	+0.9
3,459,442	-		LRK53_RS15825	0.59	+1.8
3,459,442	-		LRK53_RS15825	0.59	-1.4
3,459,442	-		LRK53_RS15825	0.59	-1.6
3,459,442	-		LRK53_RS15825	0.59	-0.3
3,459,445	+		LRK53_RS15825	0.59	-1.1
3,459,445	+		LRK53_RS15825	0.59	-1.0
3,459,445	+		LRK53_RS15825	0.59	+1.2
3,459,445	+		LRK53_RS15825	0.59	+0.4
3,459,445	+		LRK53_RS15825	0.59	+0.2
3,459,445	+		LRK53_RS15825	0.59	+0.0
3,459,445	+		LRK53_RS15825	0.59	-1.2
3,459,445	+		LRK53_RS15825	0.59	-0.3
3,459,446	-		LRK53_RS15825	0.59	-0.4
3,459,446	-		LRK53_RS15825	0.59	-0.9
3,459,446	-		LRK53_RS15825	0.59	+0.2
3,459,446	-		LRK53_RS15825	0.59	-0.8
3,459,446	-		LRK53_RS15825	0.59	-0.5
3,459,446	-		LRK53_RS15825	0.59	-0.0
3,459,446	-		LRK53_RS15825	0.59	-1.1
3,459,446	-		LRK53_RS15825	0.59	+1.6
3,459,446	-		LRK53_RS15825	0.59	+0.2
3,459,511	-		LRK53_RS15825	0.66	-0.8
3,459,723	+		LRK53_RS15825	0.88	-2.2
3,459,723	+		LRK53_RS15825	0.88	-0.7
3,459,723	+		LRK53_RS15825	0.88	-0.3
3,459,723	+		LRK53_RS15825	0.88	-0.4
3,459,723	+		LRK53_RS15825	0.88	-1.0
3,459,723	+		LRK53_RS15825	0.88	+0.5
3,459,723	+		LRK53_RS15825	0.88	-0.9
3,459,723	+		LRK53_RS15825	0.88	-0.6
3,459,723	+		LRK53_RS15825	0.88	+0.5
3,459,723	+		LRK53_RS15825	0.88	+2.8
3,459,723	+		LRK53_RS15825	0.88	+0.2
3,459,723	+		LRK53_RS15825	0.88	-3.2
3,459,723	+		LRK53_RS15825	0.88	+0.0
3,459,723	+		LRK53_RS15825	0.88	-1.8
3,459,724	-		LRK53_RS15825	0.88	-0.2
3,459,724	-		LRK53_RS15825	0.88	-0.6
3,459,724	-		LRK53_RS15825	0.88	-0.3
3,459,724	-		LRK53_RS15825	0.88	-0.2
3,459,724	-		LRK53_RS15825	0.88	-0.8
3,459,724	-		LRK53_RS15825	0.88	+0.3
3,459,724	-		LRK53_RS15825	0.88	-0.0
3,459,724	-		LRK53_RS15825	0.88	-0.3
3,459,724	-		LRK53_RS15825	0.88	-0.1
3,459,724	-		LRK53_RS15825	0.88	-1.1
3,459,946	-				+0.4
3,459,946	-				+0.8
3,460,394	+		LRK53_RS15830	0.23	-0.9
3,460,394	+		LRK53_RS15830	0.23	-0.2
3,460,394	+		LRK53_RS15830	0.23	-0.4
3,460,394	+		LRK53_RS15830	0.23	+0.4
3,460,394	+		LRK53_RS15830	0.23	-0.1
3,460,395	-		LRK53_RS15830	0.23	+1.5
3,460,395	-		LRK53_RS15830	0.23	-0.5
3,460,395	-		LRK53_RS15830	0.23	+0.2
3,460,395	-		LRK53_RS15830	0.23	+0.3
3,460,395	-		LRK53_RS15830	0.23	-0.1
3,460,395	-		LRK53_RS15830	0.23	+0.2
3,460,427	+		LRK53_RS15830	0.25	+1.3
3,460,515	+		LRK53_RS15830	0.29	-0.8
3,460,516	-		LRK53_RS15830	0.29	-0.1
3,460,516	-		LRK53_RS15830	0.29	-0.4
3,460,554	+		LRK53_RS15830	0.31	-0.4
3,460,554	+		LRK53_RS15830	0.31	-0.1
3,460,555	-		LRK53_RS15830	0.31	-2.5
3,460,575	+		LRK53_RS15830	0.32	+0.8
3,460,575	+		LRK53_RS15830	0.32	+1.2
3,460,576	-		LRK53_RS15830	0.32	-1.7
3,460,746	+		LRK53_RS15830	0.41	+1.1
3,460,746	+		LRK53_RS15830	0.41	+0.1
3,460,746	+		LRK53_RS15830	0.41	+2.2
3,460,746	+		LRK53_RS15830	0.41	+3.2
3,460,746	+		LRK53_RS15830	0.41	+0.6
3,460,746	+		LRK53_RS15830	0.41	+0.2
3,460,746	+		LRK53_RS15830	0.41	-1.8
3,460,746	+		LRK53_RS15830	0.41	-1.4
3,460,747	-		LRK53_RS15830	0.41	+1.2
3,460,747	-		LRK53_RS15830	0.41	-0.8
3,460,747	-		LRK53_RS15830	0.41	+0.6
3,460,747	-		LRK53_RS15830	0.41	+1.5
3,460,747	-		LRK53_RS15830	0.41	-0.0
3,460,747	-		LRK53_RS15830	0.41	-0.5
3,460,747	-		LRK53_RS15830	0.41	-0.6
3,460,776	+		LRK53_RS15830	0.43	-1.2
3,460,776	+		LRK53_RS15830	0.43	+1.2
3,460,776	+		LRK53_RS15830	0.43	+0.5
3,460,783	+		LRK53_RS15830	0.43	-0.4
3,460,784	+		LRK53_RS15830	0.43	-0.3
3,460,784	+		LRK53_RS15830	0.43	+0.8
3,460,784	+		LRK53_RS15830	0.43	+2.2
3,460,784	+		LRK53_RS15830	0.43	+1.2
3,460,784	+		LRK53_RS15830	0.43	-1.1
3,460,784	+		LRK53_RS15830	0.43	+1.2
3,460,784	+		LRK53_RS15830	0.43	-0.1
3,460,784	+		LRK53_RS15830	0.43	-1.1
3,460,784	+		LRK53_RS15830	0.43	-0.4
3,460,784	+		LRK53_RS15830	0.43	-0.5
3,460,784	+		LRK53_RS15830	0.43	+1.0
3,460,784	+		LRK53_RS15830	0.43	-0.7
3,460,784	+		LRK53_RS15830	0.43	+0.9
3,460,784	+		LRK53_RS15830	0.43	+0.1
3,460,784	+		LRK53_RS15830	0.43	-1.1
3,460,785	-		LRK53_RS15830	0.43	-0.8
3,460,785	-		LRK53_RS15830	0.43	+1.2
3,460,785	-		LRK53_RS15830	0.43	+1.2
3,460,785	-		LRK53_RS15830	0.43	-1.9
3,460,785	-		LRK53_RS15830	0.43	-2.1
3,460,785	-		LRK53_RS15830	0.43	-0.7
3,460,785	-		LRK53_RS15830	0.43	+0.5
3,460,785	-		LRK53_RS15830	0.43	-1.2
3,460,785	-		LRK53_RS15830	0.43	-0.4
3,460,785	-		LRK53_RS15830	0.43	+0.2
3,460,785	-		LRK53_RS15830	0.43	-1.1
3,460,785	-		LRK53_RS15830	0.43	-0.4
3,460,785	-		LRK53_RS15830	0.43	+1.1
3,460,785	-		LRK53_RS15830	0.43	-1.4
3,460,785	-		LRK53_RS15830	0.43	-1.0
3,460,785	-		LRK53_RS15830	0.43	-0.6
3,460,946	+		LRK53_RS15830	0.51	-1.6
3,460,946	+		LRK53_RS15830	0.51	+0.1
3,460,947	-		LRK53_RS15830	0.52	+0.3
3,460,947	-		LRK53_RS15830	0.52	-1.7
3,461,331	+		LRK53_RS15830	0.71	+0.4
3,461,332	-		LRK53_RS15830	0.71	+1.2
3,461,406	-		LRK53_RS15830	0.75	+0.3
3,461,530	-		LRK53_RS15830	0.81	-2.6
3,461,541	+		LRK53_RS15830	0.82	-0.6
3,461,541	+		LRK53_RS15830	0.82	-0.1
3,461,541	+		LRK53_RS15830	0.82	+0.8
3,461,541	+		LRK53_RS15830	0.82	-0.8
3,461,541	+		LRK53_RS15830	0.82	-0.2
3,461,541	+		LRK53_RS15830	0.82	-1.6
3,461,541	+		LRK53_RS15830	0.82	+0.8
3,461,541	+		LRK53_RS15830	0.82	-0.7
3,461,541	+		LRK53_RS15830	0.82	-1.4
3,461,541	+		LRK53_RS15830	0.82	+2.2
3,461,541	+		LRK53_RS15830	0.82	-0.8
3,461,541	+		LRK53_RS15830	0.82	-0.2
3,461,542	-		LRK53_RS15830	0.82	-0.8
3,461,542	-		LRK53_RS15830	0.82	-0.8
3,461,542	-		LRK53_RS15830	0.82	-0.9
3,461,542	-		LRK53_RS15830	0.82	+0.8
3,461,542	-		LRK53_RS15830	0.82	-1.4
3,461,542	-		LRK53_RS15830	0.82	+0.6
3,461,542	-		LRK53_RS15830	0.82	-0.8
3,461,542	-		LRK53_RS15830	0.82	-0.4
3,461,542	-		LRK53_RS15830	0.82	-1.6
3,461,619	+		LRK53_RS15830	0.86	+0.2
3,461,619	+		LRK53_RS15830	0.86	-0.3
3,461,619	+		LRK53_RS15830	0.86	+0.2
3,461,619	+		LRK53_RS15830	0.86	-2.0
3,461,619	+		LRK53_RS15830	0.86	-2.1
3,461,619	+		LRK53_RS15830	0.86	-0.3
3,461,619	+		LRK53_RS15830	0.86	-1.5
3,461,619	+		LRK53_RS15830	0.86	-1.1
3,461,619	+		LRK53_RS15830	0.86	+0.2
3,461,620	-		LRK53_RS15830	0.86	-0.0
3,461,620	-		LRK53_RS15830	0.86	-0.5
3,461,620	-		LRK53_RS15830	0.86	+0.2
3,461,620	-		LRK53_RS15830	0.86	-0.2
3,461,694	+		LRK53_RS15830	0.90	+0.1
3,461,694	+		LRK53_RS15830	0.90	-0.3
3,461,695	-		LRK53_RS15830	0.90	+1.8
3,461,695	-		LRK53_RS15830	0.90	+0.2
3,461,695	-		LRK53_RS15830	0.90	-2.2
3,461,695	-		LRK53_RS15830	0.90	-1.9
3,461,695	-		LRK53_RS15830	0.90	+1.2
3,461,695	-		LRK53_RS15830	0.90	-0.4
3,461,695	-		LRK53_RS15830	0.90	-0.1
3,461,695	-		LRK53_RS15830	0.90	-0.2
3,461,695	-		LRK53_RS15830	0.90	-1.9
3,461,695	-		LRK53_RS15830	0.90	-2.1
3,461,700	+				+2.4
3,461,700	+				-0.2
3,461,700	+				+0.4
3,461,700	+				+1.0
3,461,700	+				-0.1
3,461,700	+				+0.2
3,461,700	+				+1.2
3,461,700	+				+1.6
3,461,700	+				-0.1
3,461,700	+				+0.2
3,461,700	+				-0.9
3,461,700	+				-0.6
3,461,700	+				-0.2
3,461,701	-				-0.9
3,461,701	-				-1.4
3,461,701	-				+0.2
3,461,701	-				+0.4
3,461,701	-				+0.8
3,461,701	-				-0.4
3,461,701	-				-0.2
3,461,701	-				-2.4
3,461,701	-				+1.1
3,461,701	-				-1.3
3,461,701	-				-1.0
3,461,701	-				-1.5
3,461,701	-				-0.3
3,461,701	-				-0.2
3,461,701	-				-0.2
3,461,701	-				-1.0
3,461,701	-				-1.8
3,461,701	-				-0.6
3,461,899	+				-1.1
3,461,899	+				-0.9
3,461,899	+				+1.5
3,461,899	+				-1.1
3,461,899	+				+0.7
3,461,899	+				-0.9
3,461,900	-				-1.1
3,461,900	-				+1.2
3,461,900	-				-0.2
3,461,900	-				-0.2
3,461,900	-				-1.5
3,461,900	-				-1.4
3,462,321	+		LRK53_RS15835	0.69	-0.4
3,462,321	+		LRK53_RS15835	0.69	-0.4
3,462,321	+		LRK53_RS15835	0.69	-0.3
3,462,321	+		LRK53_RS15835	0.69	+0.7
3,462,321	+		LRK53_RS15835	0.69	-1.9
3,462,321	+		LRK53_RS15835	0.69	-0.9
3,462,321	+		LRK53_RS15835	0.69	-0.1
3,462,321	+		LRK53_RS15835	0.69	-1.4
3,462,321	+		LRK53_RS15835	0.69	+0.0
3,462,321	+		LRK53_RS15835	0.69	+0.2
3,462,321	+		LRK53_RS15835	0.69	-1.1
3,462,321	+		LRK53_RS15835	0.69	-0.8
3,462,321	+		LRK53_RS15835	0.69	-0.2
3,462,322	-		LRK53_RS15835	0.69	+1.2
3,462,322	-		LRK53_RS15835	0.69	-1.1
3,462,322	-		LRK53_RS15835	0.69	-0.2
3,462,322	-		LRK53_RS15835	0.69	-1.4
3,462,342	+		LRK53_RS15835	0.75	+0.1
3,462,342	+		LRK53_RS15835	0.75	-0.4
3,462,342	+		LRK53_RS15835	0.75	-1.4
3,462,342	+		LRK53_RS15835	0.75	-1.4
3,462,342	+		LRK53_RS15835	0.75	-0.3
3,462,342	+		LRK53_RS15835	0.75	+0.6
3,462,342	+		LRK53_RS15835	0.75	-0.4
3,462,342	+		LRK53_RS15835	0.75	-1.1
3,462,342	+		LRK53_RS15835	0.75	+2.5
3,462,342	+		LRK53_RS15835	0.75	+0.9
3,462,343	-		LRK53_RS15835	0.75	+0.2
3,462,343	-		LRK53_RS15835	0.75	-0.0
3,462,343	-		LRK53_RS15835	0.75	-1.4
3,462,343	-		LRK53_RS15835	0.75	-0.4
3,462,343	-		LRK53_RS15835	0.75	+0.7
3,462,354	+		LRK53_RS15835	0.78	+0.4
3,462,372	+		LRK53_RS15835	0.82	+0.1
3,462,372	+		LRK53_RS15835	0.82	-1.6
3,462,481	+				-0.4
3,462,482	-				-0.3
3,462,760	+		LRK53_RS15840	0.54	+0.5
3,462,760	+		LRK53_RS15840	0.54	-0.7
3,462,760	+		LRK53_RS15840	0.54	+0.0
3,462,760	+		LRK53_RS15840	0.54	-0.5
3,462,760	+		LRK53_RS15840	0.54	-0.9
3,462,760	+		LRK53_RS15840	0.54	-0.4
3,462,760	+		LRK53_RS15840	0.54	-1.1
3,462,760	+		LRK53_RS15840	0.54	-1.1
3,462,760	+		LRK53_RS15840	0.54	+0.3
3,462,760	+		LRK53_RS15840	0.54	-1.9
3,462,760	+		LRK53_RS15840	0.54	-0.9
3,462,760	+		LRK53_RS15840	0.54	+1.2
3,462,761	-		LRK53_RS15840	0.54	+0.2
3,462,761	-		LRK53_RS15840	0.54	-0.7
3,462,761	-		LRK53_RS15840	0.54	-2.1
3,462,761	-		LRK53_RS15840	0.54	+0.2
3,462,761	-		LRK53_RS15840	0.54	+2.2
3,462,761	-		LRK53_RS15840	0.54	-1.2
3,462,761	-		LRK53_RS15840	0.54	-0.8
3,462,761	-		LRK53_RS15840	0.54	+0.6
3,462,761	-		LRK53_RS15840	0.54	+0.2
3,462,761	-		LRK53_RS15840	0.54	+0.0
3,462,761	-		LRK53_RS15840	0.54	-1.7
3,462,761	-		LRK53_RS15840	0.54	-1.8
3,462,761	-		LRK53_RS15840	0.54	+0.5
3,462,761	-		LRK53_RS15840	0.54	-0.5
3,462,761	-		LRK53_RS15840	0.54	+0.1