Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS15475

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
3,381,226	+		LRK53_RS15470	0.55	-1.8
3,381,226	+		LRK53_RS15470	0.55	-1.4
3,381,226	+		LRK53_RS15470	0.55	-0.4
3,381,226	+		LRK53_RS15470	0.55	-2.7
3,381,226	+		LRK53_RS15470	0.55	+1.2
3,381,226	+		LRK53_RS15470	0.55	-0.0
3,381,226	+		LRK53_RS15470	0.55	-0.2
3,381,226	+		LRK53_RS15470	0.55	-0.1
3,381,226	+		LRK53_RS15470	0.55	+0.4
3,381,226	+		LRK53_RS15470	0.55	+1.2
3,381,226	+		LRK53_RS15470	0.55	+0.5
3,381,226	+		LRK53_RS15470	0.55	+1.2
3,381,226	+		LRK53_RS15470	0.55	+0.2
3,381,226	+		LRK53_RS15470	0.55	+0.2
3,381,226	+		LRK53_RS15470	0.55	+0.7
3,381,226	+		LRK53_RS15470	0.55	-0.8
3,381,227	-		LRK53_RS15470	0.55	+0.5
3,381,227	-		LRK53_RS15470	0.55	-0.8
3,381,227	-		LRK53_RS15470	0.55	+0.8
3,381,227	-		LRK53_RS15470	0.55	+0.0
3,381,227	-		LRK53_RS15470	0.55	-0.4
3,381,227	-		LRK53_RS15470	0.55	-1.7
3,381,227	-		LRK53_RS15470	0.55	-0.6
3,381,227	-		LRK53_RS15470	0.55	+1.8
3,381,227	-		LRK53_RS15470	0.55	+0.2
3,381,227	-		LRK53_RS15470	0.55	+0.5
3,381,227	-		LRK53_RS15470	0.55	+0.2
3,381,227	-		LRK53_RS15470	0.55	+0.1
3,381,227	-		LRK53_RS15470	0.55	+0.5
3,381,227	-		LRK53_RS15470	0.55	-1.8
3,381,270	+		LRK53_RS15470	0.57	-0.2
3,381,270	+		LRK53_RS15470	0.57	-1.0
3,381,270	+		LRK53_RS15470	0.57	-0.4
3,381,270	+		LRK53_RS15470	0.57	-1.2
3,381,270	+		LRK53_RS15470	0.57	-0.1
3,381,270	+		LRK53_RS15470	0.57	-0.8
3,381,271	-		LRK53_RS15470	0.57	-0.4
3,381,271	-		LRK53_RS15470	0.57	+0.5
3,381,271	-		LRK53_RS15470	0.57	-0.4
3,381,271	-		LRK53_RS15470	0.57	-2.4
3,381,330	+		LRK53_RS15470	0.61	+0.2
3,381,330	+		LRK53_RS15470	0.61	-0.7
3,381,330	+		LRK53_RS15470	0.61	-0.8
3,381,330	+		LRK53_RS15470	0.61	-0.4
3,381,331	-		LRK53_RS15470	0.61	-1.4
3,381,331	-		LRK53_RS15470	0.61	-0.7
3,381,331	-		LRK53_RS15470	0.61	+0.4
3,381,331	-		LRK53_RS15470	0.61	-0.8
3,381,331	-		LRK53_RS15470	0.61	-0.6
3,381,331	-		LRK53_RS15470	0.61	+1.2
3,381,471	+		LRK53_RS15470	0.69	+1.2
3,381,471	+		LRK53_RS15470	0.69	+0.6
3,381,471	+		LRK53_RS15470	0.69	-0.4
3,381,471	+		LRK53_RS15470	0.69	+1.2
3,381,471	+		LRK53_RS15470	0.69	+0.5
3,381,471	+		LRK53_RS15470	0.69	+0.7
3,381,472	-		LRK53_RS15470	0.69	+0.1
3,381,474	+		LRK53_RS15470	0.70	+1.8
3,381,474	+		LRK53_RS15470	0.70	-0.6
3,381,474	+		LRK53_RS15470	0.70	+0.1
3,381,474	+		LRK53_RS15470	0.70	+1.7
3,381,474	+		LRK53_RS15470	0.70	-0.2
3,381,474	+		LRK53_RS15470	0.70	-1.1
3,381,475	-		LRK53_RS15470	0.70	+0.6
3,381,475	-		LRK53_RS15470	0.70	+1.0
3,381,475	-		LRK53_RS15470	0.70	-1.4
3,381,475	-		LRK53_RS15470	0.70	+0.9
3,381,492	+		LRK53_RS15470	0.71	+0.9
3,381,493	-		LRK53_RS15470	0.71	-0.9
3,381,493	-		LRK53_RS15470	0.71	+0.5
3,381,624	+		LRK53_RS15470	0.79	+0.8
3,381,624	+		LRK53_RS15470	0.79	+0.1
3,381,624	+		LRK53_RS15470	0.79	+0.6
3,381,625	-		LRK53_RS15470	0.79	-1.4
3,381,636	+		LRK53_RS15470	0.79	-0.8
3,381,636	+		LRK53_RS15470	0.79	+0.2
3,381,636	+		LRK53_RS15470	0.79	-1.1
3,381,636	+		LRK53_RS15470	0.79	-1.9
3,381,636	+		LRK53_RS15470	0.79	-1.1
3,381,636	+		LRK53_RS15470	0.79	+0.9
3,381,636	+		LRK53_RS15470	0.79	-0.8
3,381,636	+		LRK53_RS15470	0.79	-0.4
3,381,636	+		LRK53_RS15470	0.79	+1.2
3,381,637	-		LRK53_RS15470	0.79	+0.5
3,381,637	-		LRK53_RS15470	0.79	+1.7
3,381,637	-		LRK53_RS15470	0.79	+0.2
3,381,637	-		LRK53_RS15470	0.79	+1.2
3,381,637	-		LRK53_RS15470	0.79	-1.8
3,381,666	+		LRK53_RS15470	0.81	-0.6
3,381,666	+		LRK53_RS15470	0.81	-0.7
3,381,666	+		LRK53_RS15470	0.81	-0.2
3,381,666	+		LRK53_RS15470	0.81	+0.8
3,381,667	-		LRK53_RS15470	0.81	-0.4
3,381,667	-		LRK53_RS15470	0.81	-1.0
3,381,667	-		LRK53_RS15470	0.81	-2.1
3,381,786	+		LRK53_RS15470	0.88	-0.6
3,381,786	+		LRK53_RS15470	0.88	-0.2
3,381,786	+		LRK53_RS15470	0.88	+2.8
3,381,786	+		LRK53_RS15470	0.88	-0.6
3,381,787	-		LRK53_RS15470	0.88	-0.8
3,381,787	-		LRK53_RS15470	0.88	+0.1
3,381,802	-		LRK53_RS15470	0.89	-0.7
3,381,802	-		LRK53_RS15470	0.89	-0.8
3,381,873	+				+0.2
3,381,873	+				-0.1
3,381,873	+				-2.7
3,381,874	-				-0.3
3,381,874	-				-1.0
3,381,874	-				-0.8
3,381,874	-				-1.2
3,381,874	-				-0.9
3,381,874	-				-1.0
3,381,975	+				-0.4
3,381,975	+				-0.8
3,381,975	+				-1.6
3,381,975	+				-1.2
3,381,975	+				+0.1
3,381,975	+				+0.2
3,381,976	-				-0.9
3,381,976	-				-0.6
3,382,154	+				-0.9
3,382,155	-				+2.2
3,382,155	-				-0.9
3,382,265	+		LRK53_RS15475	0.13	+0.6
3,382,265	+		LRK53_RS15475	0.13	+0.6
3,382,265	+		LRK53_RS15475	0.13	-0.4
3,382,265	+		LRK53_RS15475	0.13	+0.2
3,382,266	-		LRK53_RS15475	0.13	-0.1
3,382,266	-		LRK53_RS15475	0.13	+1.2
3,382,569	-		LRK53_RS15475	0.44	-0.1
3,382,667	+		LRK53_RS15475	0.54	-0.1
3,382,667	+		LRK53_RS15475	0.54	-0.5
3,382,667	+		LRK53_RS15475	0.54	-1.9
3,382,667	+		LRK53_RS15475	0.54	-2.0
3,382,667	+		LRK53_RS15475	0.54	-0.5
3,382,668	-		LRK53_RS15475	0.54	-0.6
3,382,668	-		LRK53_RS15475	0.54	-1.9
3,382,668	-		LRK53_RS15475	0.54	-1.9
3,382,668	-		LRK53_RS15475	0.54	-0.9
3,382,668	-		LRK53_RS15475	0.54	-0.0
3,382,700	+		LRK53_RS15475	0.57	-0.6
3,382,700	+		LRK53_RS15475	0.57	-0.1
3,382,701	-		LRK53_RS15475	0.57	-1.3
3,382,701	-		LRK53_RS15475	0.57	+0.3
3,382,701	-		LRK53_RS15475	0.57	-0.0
3,382,701	-		LRK53_RS15475	0.57	+0.2
3,382,910	+		LRK53_RS15475	0.79	-1.5
3,382,910	+		LRK53_RS15475	0.79	-0.4
3,382,911	-		LRK53_RS15475	0.79	-1.2
3,382,911	-		LRK53_RS15475	0.79	+0.4
3,382,961	+		LRK53_RS15475	0.84	-1.6
3,382,961	+		LRK53_RS15475	0.84	-2.3
3,382,961	+		LRK53_RS15475	0.84	+0.5
3,382,961	+		LRK53_RS15475	0.84	-1.2
3,382,961	+		LRK53_RS15475	0.84	-0.8
3,382,962	-		LRK53_RS15475	0.84	+0.1
3,382,962	-		LRK53_RS15475	0.84	-1.6
3,382,962	-		LRK53_RS15475	0.84	+0.2
3,382,962	-		LRK53_RS15475	0.84	+0.2
3,382,962	-		LRK53_RS15475	0.84	-0.6
3,383,602	+		LRK53_RS15480	0.30	-0.2
3,383,644	+		LRK53_RS15480	0.32	-1.9
3,383,644	+		LRK53_RS15480	0.32	+0.6
3,383,645	-		LRK53_RS15480	0.32	-1.2
3,383,645	-		LRK53_RS15480	0.32	-1.4
3,383,824	+		LRK53_RS15480	0.43	+0.6
3,383,824	+		LRK53_RS15480	0.43	-2.2
3,383,824	+		LRK53_RS15480	0.43	+0.2
3,383,824	+		LRK53_RS15480	0.43	-0.4
3,383,824	+		LRK53_RS15480	0.43	-0.1
3,383,824	+		LRK53_RS15480	0.43	-1.5
3,383,824	+		LRK53_RS15480	0.43	+0.2
3,383,824	+		LRK53_RS15480	0.43	-1.3
3,383,824	+		LRK53_RS15480	0.43	-2.1
3,383,825	-		LRK53_RS15480	0.44	-0.5
3,383,825	-		LRK53_RS15480	0.44	-2.9
3,383,825	-		LRK53_RS15480	0.44	-0.1
3,383,825	-		LRK53_RS15480	0.44	-1.5
3,383,825	-		LRK53_RS15480	0.44	+0.8
3,383,825	-		LRK53_RS15480	0.44	-1.1
3,383,825	-		LRK53_RS15480	0.44	-1.9
3,383,863	+		LRK53_RS15480	0.46	-0.8
3,383,864	-		LRK53_RS15480	0.46	-1.2
3,383,864	-		LRK53_RS15480	0.46	-0.9
3,383,893	+		LRK53_RS15480	0.48	-0.6
3,383,893	+		LRK53_RS15480	0.48	-0.1
3,383,894	-		LRK53_RS15480	0.48	-1.1
3,383,894	-		LRK53_RS15480	0.48	-1.6
3,383,894	-		LRK53_RS15480	0.48	+0.5
3,383,894	-		LRK53_RS15480	0.48	+1.2
3,383,894	-		LRK53_RS15480	0.48	+0.2
3,384,019	+		LRK53_RS15480	0.56	-0.4
3,384,019	+		LRK53_RS15480	0.56	+0.2
3,384,019	+		LRK53_RS15480	0.56	-1.1
3,384,019	+		LRK53_RS15480	0.56	-0.5
3,384,019	+		LRK53_RS15480	0.56	-1.1
3,384,019	+		LRK53_RS15480	0.56	+0.5
3,384,019	+		LRK53_RS15480	0.56	+0.6
3,384,019	+		LRK53_RS15480	0.56	-0.8
3,384,020	-		LRK53_RS15480	0.56	+0.2
3,384,020	-		LRK53_RS15480	0.56	-0.4
3,384,020	-		LRK53_RS15480	0.56	-2.1
3,384,020	-		LRK53_RS15480	0.56	-1.1
3,384,022	+		LRK53_RS15480	0.56	+1.2
3,384,022	+		LRK53_RS15480	0.56	-0.0
3,384,022	+		LRK53_RS15480	0.56	-0.1
3,384,022	+		LRK53_RS15480	0.56	-0.0
3,384,022	+		LRK53_RS15480	0.56	-0.0
3,384,022	+		LRK53_RS15480	0.56	+0.2
3,384,022	+		LRK53_RS15480	0.56	+1.8
3,384,023	-		LRK53_RS15480	0.56	-1.8
3,384,023	-		LRK53_RS15480	0.56	-1.7
3,384,023	-		LRK53_RS15480	0.56	+2.2
3,384,023	-		LRK53_RS15480	0.56	-0.4
3,384,023	-		LRK53_RS15480	0.56	+0.3
3,384,028	+		LRK53_RS15480	0.56	+0.2
3,384,028	+		LRK53_RS15480	0.56	-0.9
3,384,041	-		LRK53_RS15480	0.57	-0.5
3,384,041	-		LRK53_RS15480	0.57	-0.8