Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS15325

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
3,343,317	+		LRK53_RS15320	0.34	-0.9
3,343,317	+		LRK53_RS15320	0.34	+1.0
3,343,317	+		LRK53_RS15320	0.34	-2.3
3,343,317	+		LRK53_RS15320	0.34	-0.3
3,343,318	-		LRK53_RS15320	0.34	-0.2
3,343,318	-		LRK53_RS15320	0.34	-0.9
3,343,318	-		LRK53_RS15320	0.34	-1.1
3,343,341	+		LRK53_RS15320	0.37	-1.3
3,343,341	+		LRK53_RS15320	0.37	+0.5
3,343,489	+		LRK53_RS15320	0.59	-0.9
3,343,489	+		LRK53_RS15320	0.59	+1.8
3,343,489	+		LRK53_RS15320	0.59	+2.2
3,343,489	+		LRK53_RS15320	0.59	+1.0
3,343,489	+		LRK53_RS15320	0.59	-1.2
3,343,489	+		LRK53_RS15320	0.59	-0.7
3,343,489	+		LRK53_RS15320	0.59	-0.2
3,343,490	-		LRK53_RS15320	0.59	-0.8
3,343,547	+		LRK53_RS15320	0.67	-1.1
3,343,547	+		LRK53_RS15320	0.67	-2.8
3,343,547	+		LRK53_RS15320	0.67	-0.8
3,343,547	+		LRK53_RS15320	0.67	+1.2
3,343,547	+		LRK53_RS15320	0.67	-1.3
3,343,547	+		LRK53_RS15320	0.67	+0.2
3,343,547	+		LRK53_RS15320	0.67	-0.5
3,343,547	+		LRK53_RS15320	0.67	-0.0
3,343,547	+		LRK53_RS15320	0.67	-1.4
3,343,547	+		LRK53_RS15320	0.67	+0.0
3,343,547	+		LRK53_RS15320	0.67	+0.8
3,343,547	+		LRK53_RS15320	0.67	-0.9
3,343,547	+		LRK53_RS15320	0.67	-0.4
3,343,547	+		LRK53_RS15320	0.67	+0.4
3,343,547	+		LRK53_RS15320	0.67	+0.6
3,343,547	+		LRK53_RS15320	0.67	+0.3
3,343,547	+		LRK53_RS15320	0.67	+1.2
3,343,547	+		LRK53_RS15320	0.67	-0.6
3,343,547	+		LRK53_RS15320	0.67	-0.3
3,343,547	+		LRK53_RS15320	0.67	-0.3
3,343,548	-		LRK53_RS15320	0.67	-1.5
3,343,548	-		LRK53_RS15320	0.67	+0.7
3,343,548	-		LRK53_RS15320	0.67	-0.9
3,343,548	-		LRK53_RS15320	0.67	-1.0
3,343,548	-		LRK53_RS15320	0.67	-2.5
3,343,548	-		LRK53_RS15320	0.67	+3.2
3,343,548	-		LRK53_RS15320	0.67	+0.7
3,343,548	-		LRK53_RS15320	0.67	+1.2
3,343,548	-		LRK53_RS15320	0.67	-1.1
3,343,548	-		LRK53_RS15320	0.67	+0.0
3,343,548	-		LRK53_RS15320	0.67	+1.2
3,343,548	-		LRK53_RS15320	0.67	+1.2
3,343,548	-		LRK53_RS15320	0.67	-1.1
3,343,548	-		LRK53_RS15320	0.67	-0.8
3,343,548	-		LRK53_RS15320	0.67	+1.2
3,343,548	-		LRK53_RS15320	0.67	+0.7
3,343,548	-		LRK53_RS15320	0.67	+0.9
3,343,548	-		LRK53_RS15320	0.67	-0.1
3,343,548	-		LRK53_RS15320	0.67	-0.8
3,343,548	-		LRK53_RS15320	0.67	-0.6
3,343,548	-		LRK53_RS15320	0.67	-1.6
3,343,548	-		LRK53_RS15320	0.67	-0.8
3,343,548	-		LRK53_RS15320	0.67	+2.2
3,343,548	-		LRK53_RS15320	0.67	-0.7
3,343,548	-		LRK53_RS15320	0.67	-1.1
3,343,548	-		LRK53_RS15320	0.67	+0.2
3,343,548	-		LRK53_RS15320	0.67	-0.7
3,343,548	-		LRK53_RS15320	0.67	-0.9
3,343,548	-		LRK53_RS15320	0.67	-0.3
3,343,548	-		LRK53_RS15320	0.67	-0.9
3,343,548	-		LRK53_RS15320	0.67	-0.3
3,343,548	-		LRK53_RS15320	0.67	+1.2
3,343,548	-		LRK53_RS15320	0.67	-0.9
3,343,548	-		LRK53_RS15320	0.67	-1.2
3,343,548	-		LRK53_RS15320	0.67	-1.1
3,343,548	-		LRK53_RS15320	0.67	-0.3
3,343,548	-		LRK53_RS15320	0.67	-0.3
3,343,548	-		LRK53_RS15320	0.67	-1.3
3,343,548	-		LRK53_RS15320	0.67	-1.7
3,343,548	-		LRK53_RS15320	0.67	-1.1
3,343,585	+		LRK53_RS15320	0.73	-0.4
3,343,591	+		LRK53_RS15320	0.74	-1.3
3,343,591	+		LRK53_RS15320	0.74	-1.3
3,343,592	-		LRK53_RS15320	0.74	-1.3
3,343,592	-		LRK53_RS15320	0.74	+0.2
3,343,592	-		LRK53_RS15320	0.74	-1.1
3,343,592	-		LRK53_RS15320	0.74	-0.1
3,343,683	+		LRK53_RS15320	0.87	+1.2
3,343,683	+		LRK53_RS15320	0.87	-1.1
3,343,708	+				-1.6
3,343,709	-				-0.8
3,343,882	+				-0.1
3,343,882	+				-0.9
3,343,882	+				-1.6
3,343,883	-				-1.5
3,343,883	-				+2.6
3,343,883	-				+0.2
3,343,997	-				-0.0
3,343,997	-				-0.9
3,344,088	+				+0.1
3,344,088	+				-2.0
3,344,088	+				-1.6
3,344,088	+				+1.7
3,344,088	+				-0.4
3,344,089	-				+0.2
3,344,089	-				-0.3
3,344,089	-				+1.9
3,344,089	-				-0.2
3,344,089	-				-0.6
3,344,089	-				+0.8
3,344,089	-				-0.2
3,344,089	-				-0.1
3,344,089	-				-1.3
3,344,215	+				+2.2
3,344,215	+				-2.3
3,344,215	+				+0.2
3,344,215	+				+0.2
3,344,215	+				-2.8
3,344,215	+				-0.3
3,344,215	+				-0.3
3,344,215	+				-1.3
3,344,215	+				-0.6
3,344,215	+				+0.2
3,344,215	+				-1.0
3,344,215	+				-0.6
3,344,215	+				-0.3
3,344,215	+				-0.9
3,344,215	+				-0.3
3,344,216	-				-2.3
3,344,216	-				+1.0
3,344,216	-				+0.2
3,344,216	-				-0.2
3,344,216	-				-0.8
3,344,216	-				+1.5
3,344,216	-				-0.1
3,344,216	-				-0.5
3,344,216	-				+1.2
3,344,216	-				-0.3
3,344,216	-				-1.1
3,344,216	-				-0.1
3,344,427	+		LRK53_RS15325	0.14	-1.3
3,344,427	+		LRK53_RS15325	0.14	-1.7
3,344,427	+		LRK53_RS15325	0.14	-1.9
3,344,427	+		LRK53_RS15325	0.14	+0.0
3,344,427	+		LRK53_RS15325	0.14	-0.3
3,344,427	+		LRK53_RS15325	0.14	+0.8
3,344,427	+		LRK53_RS15325	0.14	-0.8
3,344,427	+		LRK53_RS15325	0.14	-2.5
3,344,427	+		LRK53_RS15325	0.14	+1.2
3,344,427	+		LRK53_RS15325	0.14	+0.5
3,344,427	+		LRK53_RS15325	0.14	+1.5
3,344,427	+		LRK53_RS15325	0.14	+1.0
3,344,427	+		LRK53_RS15325	0.14	-0.6
3,344,428	-		LRK53_RS15325	0.14	-3.0
3,344,428	-		LRK53_RS15325	0.14	+0.1
3,344,428	-		LRK53_RS15325	0.14	-0.8
3,344,428	-		LRK53_RS15325	0.14	-0.8
3,344,428	-		LRK53_RS15325	0.14	-0.4
3,344,428	-		LRK53_RS15325	0.14	+1.1
3,344,428	-		LRK53_RS15325	0.14	-2.0
3,344,428	-		LRK53_RS15325	0.14	-0.6
3,344,428	-		LRK53_RS15325	0.14	+0.5
3,344,428	-		LRK53_RS15325	0.14	-0.4
3,344,428	-		LRK53_RS15325	0.14	-1.1
3,344,428	-		LRK53_RS15325	0.14	-2.7
3,344,428	-		LRK53_RS15325	0.14	-0.8
3,344,428	-		LRK53_RS15325	0.14	-2.8
3,344,428	-		LRK53_RS15325	0.14	+0.2
3,344,428	-		LRK53_RS15325	0.14	-0.3
3,344,428	-		LRK53_RS15325	0.14	-1.1
3,344,428	-		LRK53_RS15325	0.14	+0.8
3,344,446	-		LRK53_RS15325	0.14	+0.4
3,344,473	-		LRK53_RS15325	0.15	-1.3
3,344,497	+		LRK53_RS15325	0.16	-2.1
3,344,497	+		LRK53_RS15325	0.16	-0.4
3,344,497	+		LRK53_RS15325	0.16	+0.5
3,344,497	+		LRK53_RS15325	0.16	-0.7
3,344,497	+		LRK53_RS15325	0.16	-0.2
3,344,497	+		LRK53_RS15325	0.16	+0.0
3,344,498	-		LRK53_RS15325	0.17	-2.6
3,344,498	-		LRK53_RS15325	0.17	+0.1
3,344,498	-		LRK53_RS15325	0.17	+1.2
3,344,498	-		LRK53_RS15325	0.17	-0.6
3,344,498	-		LRK53_RS15325	0.17	+0.1
3,344,498	-		LRK53_RS15325	0.17	+0.7
3,344,498	-		LRK53_RS15325	0.17	-0.8
3,344,501	+		LRK53_RS15325	0.17	-0.5
3,344,501	+		LRK53_RS15325	0.17	-0.4
3,344,501	+		LRK53_RS15325	0.17	-0.9
3,344,501	+		LRK53_RS15325	0.17	+1.2
3,344,502	-		LRK53_RS15325	0.17	-1.4
3,344,653	+		LRK53_RS15325	0.23	-0.3
3,344,653	+		LRK53_RS15325	0.23	-0.8
3,344,653	+		LRK53_RS15325	0.23	-0.1
3,344,653	+		LRK53_RS15325	0.23	+0.5
3,344,653	+		LRK53_RS15325	0.23	-0.8
3,344,653	+		LRK53_RS15325	0.23	-0.2
3,344,653	+		LRK53_RS15325	0.23	-1.5
3,344,653	+		LRK53_RS15325	0.23	-0.0
3,344,654	-		LRK53_RS15325	0.23	+1.2
3,344,654	-		LRK53_RS15325	0.23	-1.3
3,344,654	-		LRK53_RS15325	0.23	-0.3
3,344,657	+		LRK53_RS15325	0.23	+1.2
3,344,657	+		LRK53_RS15325	0.23	-1.8
3,344,657	+		LRK53_RS15325	0.23	+0.7
3,344,657	+		LRK53_RS15325	0.23	-0.7
3,344,657	+		LRK53_RS15325	0.23	+1.2
3,344,657	+		LRK53_RS15325	0.23	+0.7
3,344,657	+		LRK53_RS15325	0.23	+0.7
3,344,658	-		LRK53_RS15325	0.23	-0.8
3,344,658	-		LRK53_RS15325	0.23	+1.0
3,344,658	-		LRK53_RS15325	0.23	+0.2
3,344,658	-		LRK53_RS15325	0.23	-0.3
3,344,658	-		LRK53_RS15325	0.23	-1.5
3,344,658	-		LRK53_RS15325	0.23	-0.4
3,344,658	-		LRK53_RS15325	0.23	-0.5
3,344,658	-		LRK53_RS15325	0.23	-1.9
3,344,696	+		LRK53_RS15325	0.25	+2.2
3,344,696	+		LRK53_RS15325	0.25	-0.4
3,344,696	+		LRK53_RS15325	0.25	-0.3
3,344,697	-		LRK53_RS15325	0.25	-0.3
3,344,697	-		LRK53_RS15325	0.25	+0.4
3,344,697	-		LRK53_RS15325	0.25	+0.8
3,344,697	-		LRK53_RS15325	0.25	-0.2
3,344,864	+		LRK53_RS15325	0.32	-1.9
3,344,864	+		LRK53_RS15325	0.32	-0.8
3,344,864	+		LRK53_RS15325	0.32	-1.0
3,344,864	+		LRK53_RS15325	0.32	-3.1
3,344,864	+		LRK53_RS15325	0.32	+0.4
3,344,864	+		LRK53_RS15325	0.32	+0.7
3,344,865	-		LRK53_RS15325	0.32	+0.5
3,344,865	-		LRK53_RS15325	0.32	-1.3
3,344,865	-		LRK53_RS15325	0.32	-1.8
3,344,865	-		LRK53_RS15325	0.32	-0.1
3,344,865	-		LRK53_RS15325	0.32	-0.3
3,344,865	-		LRK53_RS15325	0.32	-0.8
3,344,865	-		LRK53_RS15325	0.32	-0.3
3,344,916	+		LRK53_RS15325	0.34	-1.9
3,344,916	+		LRK53_RS15325	0.34	-0.2
3,344,916	+		LRK53_RS15325	0.34	+0.1
3,344,916	+		LRK53_RS15325	0.34	-1.2
3,344,916	+		LRK53_RS15325	0.34	-0.8
3,344,917	-		LRK53_RS15325	0.34	+0.6
3,344,917	-		LRK53_RS15325	0.34	-0.8
3,344,917	-		LRK53_RS15325	0.34	-0.1
3,344,917	-		LRK53_RS15325	0.34	-0.2
3,344,951	+		LRK53_RS15325	0.35	-2.3
3,344,951	+		LRK53_RS15325	0.35	-1.4
3,344,951	+		LRK53_RS15325	0.35	-0.2
3,344,951	+		LRK53_RS15325	0.35	-0.5
3,344,951	+		LRK53_RS15325	0.35	+1.0
3,344,951	+		LRK53_RS15325	0.35	-1.8
3,344,951	+		LRK53_RS15325	0.35	-0.3
3,344,951	+		LRK53_RS15325	0.35	+1.2
3,344,951	+		LRK53_RS15325	0.35	+0.1
3,344,951	+		LRK53_RS15325	0.35	-0.8
3,344,951	+		LRK53_RS15325	0.35	-1.3
3,344,952	-		LRK53_RS15325	0.36	-0.3
3,344,952	-		LRK53_RS15325	0.36	+2.0
3,344,952	-		LRK53_RS15325	0.36	-1.2
3,344,952	-		LRK53_RS15325	0.36	-0.6
3,344,952	-		LRK53_RS15325	0.36	+0.9
3,344,952	-		LRK53_RS15325	0.36	-1.3
3,344,952	-		LRK53_RS15325	0.36	-0.1
3,344,952	-		LRK53_RS15325	0.36	-1.3
3,344,952	-		LRK53_RS15325	0.36	-1.1
3,344,952	-		LRK53_RS15325	0.36	-0.5
3,344,952	-		LRK53_RS15325	0.36	+1.2
3,344,952	-		LRK53_RS15325	0.36	-0.5
3,344,952	-		LRK53_RS15325	0.36	-1.6
3,344,952	-		LRK53_RS15325	0.36	-1.8
3,344,952	-		LRK53_RS15325	0.36	-0.9
3,344,952	-		LRK53_RS15325	0.36	-0.2
3,344,975	+		LRK53_RS15325	0.36	-0.9
3,344,976	-		LRK53_RS15325	0.37	-2.3
3,344,976	-		LRK53_RS15325	0.37	-0.1
3,344,976	-		LRK53_RS15325	0.37	-2.1
3,345,008	+		LRK53_RS15325	0.38	-0.6
3,345,008	+		LRK53_RS15325	0.38	-1.6
3,345,009	-		LRK53_RS15325	0.38	+0.3
3,345,009	-		LRK53_RS15325	0.38	+0.7
3,345,032	+		LRK53_RS15325	0.39	-0.2
3,345,032	+		LRK53_RS15325	0.39	-0.8
3,345,032	+		LRK53_RS15325	0.39	+1.2
3,345,032	+		LRK53_RS15325	0.39	+0.7
3,345,032	+		LRK53_RS15325	0.39	-1.0
3,345,033	-		LRK53_RS15325	0.39	+0.3
3,345,033	-		LRK53_RS15325	0.39	+1.2
3,345,033	-		LRK53_RS15325	0.39	-0.6
3,345,033	-		LRK53_RS15325	0.39	+1.2
3,345,033	-		LRK53_RS15325	0.39	+0.7
3,345,033	-		LRK53_RS15325	0.39	+0.1
3,345,033	-		LRK53_RS15325	0.39	+0.1
3,345,038	+		LRK53_RS15325	0.39	-0.2
3,345,038	+		LRK53_RS15325	0.39	-0.0
3,345,038	+		LRK53_RS15325	0.39	+0.7
3,345,038	+		LRK53_RS15325	0.39	-0.4
3,345,038	+		LRK53_RS15325	0.39	+0.2
3,345,038	+		LRK53_RS15325	0.39	+0.3
3,345,038	+		LRK53_RS15325	0.39	-0.3
3,345,039	-		LRK53_RS15325	0.39	-0.3
3,345,039	-		LRK53_RS15325	0.39	-1.4
3,345,039	-		LRK53_RS15325	0.39	-0.2
3,345,039	-		LRK53_RS15325	0.39	+0.5
3,345,039	-		LRK53_RS15325	0.39	-1.8
3,345,039	-		LRK53_RS15325	0.39	-1.1
3,345,089	+		LRK53_RS15325	0.41	-0.3
3,345,089	+		LRK53_RS15325	0.41	+0.5
3,345,089	+		LRK53_RS15325	0.41	+1.2
3,345,089	+		LRK53_RS15325	0.41	+0.1
3,345,089	+		LRK53_RS15325	0.41	+1.2
3,345,089	+		LRK53_RS15325	0.41	+1.2
3,345,089	+		LRK53_RS15325	0.41	+1.4
3,345,090	-		LRK53_RS15325	0.41	+1.6
3,345,090	-		LRK53_RS15325	0.41	-1.6
3,345,090	-		LRK53_RS15325	0.41	-0.8
3,345,090	-		LRK53_RS15325	0.41	-1.1
3,345,090	-		LRK53_RS15325	0.41	+1.7
3,345,090	-		LRK53_RS15325	0.41	+0.5
3,345,090	-		LRK53_RS15325	0.41	-1.0
3,345,090	-		LRK53_RS15325	0.41	+1.2
3,345,090	-		LRK53_RS15325	0.41	+0.0
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3,345,624	+		LRK53_RS15325	0.64	-1.0
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3,345,931	+		LRK53_RS15325	0.76	+1.2
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3,345,932	-		LRK53_RS15325	0.76	-1.1
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3,346,112	+		LRK53_RS15325	0.84	-2.3
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3,346,159	+		LRK53_RS15325	0.86	-1.1
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3,346,195	-		LRK53_RS15325	0.87	-1.1
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3,346,196	+		LRK53_RS15325	0.87	-1.1
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3,346,196	+		LRK53_RS15325	0.87	-1.8
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3,346,197	-		LRK53_RS15325	0.88	-1.7
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3,346,197	-		LRK53_RS15325	0.88	-0.1
3,346,197	-		LRK53_RS15325	0.88	-2.1
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3,346,329	-				-1.1
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3,346,445	+				+1.2
3,346,445	+				+1.0
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