Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS15165

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
3,310,800	+		LRK53_RS15160	0.25	+0.3
3,310,800	+		LRK53_RS15160	0.25	+0.8
3,310,801	-		LRK53_RS15160	0.25	+0.1
3,310,801	-		LRK53_RS15160	0.25	-0.5
3,310,801	-		LRK53_RS15160	0.25	-1.3
3,311,064	+		LRK53_RS15160	0.47	+2.3
3,311,064	+		LRK53_RS15160	0.47	+1.8
3,311,064	+		LRK53_RS15160	0.47	+0.4
3,311,064	+		LRK53_RS15160	0.47	+0.3
3,311,064	+		LRK53_RS15160	0.47	-1.3
3,311,064	+		LRK53_RS15160	0.47	+1.3
3,311,064	+		LRK53_RS15160	0.47	+3.6
3,311,064	+		LRK53_RS15160	0.47	+0.8
3,311,064	+		LRK53_RS15160	0.47	+3.3
3,311,064	+		LRK53_RS15160	0.47	-0.7
3,311,065	-		LRK53_RS15160	0.47	+1.3
3,311,065	-		LRK53_RS15160	0.47	+0.4
3,311,065	-		LRK53_RS15160	0.47	-0.7
3,311,065	-		LRK53_RS15160	0.47	-0.3
3,311,065	-		LRK53_RS15160	0.47	-1.9
3,311,065	-		LRK53_RS15160	0.47	-0.2
3,311,065	-		LRK53_RS15160	0.47	-0.1
3,311,065	-		LRK53_RS15160	0.47	-2.6
3,311,065	-		LRK53_RS15160	0.47	-0.3
3,311,065	-		LRK53_RS15160	0.47	+0.3
3,311,065	-		LRK53_RS15160	0.47	-0.7
3,311,099	+		LRK53_RS15160	0.50	+1.3
3,311,109	+		LRK53_RS15160	0.50	+2.3
3,311,109	+		LRK53_RS15160	0.50	-1.9
3,311,109	+		LRK53_RS15160	0.50	+0.1
3,311,109	+		LRK53_RS15160	0.50	-1.9
3,311,109	+		LRK53_RS15160	0.50	-0.7
3,311,109	+		LRK53_RS15160	0.50	-1.7
3,311,109	+		LRK53_RS15160	0.50	+0.6
3,311,109	+		LRK53_RS15160	0.50	-0.1
3,311,109	+		LRK53_RS15160	0.50	+2.3
3,311,109	+		LRK53_RS15160	0.50	-0.0
3,311,109	+		LRK53_RS15160	0.50	-1.7
3,311,110	-		LRK53_RS15160	0.50	+0.8
3,311,110	-		LRK53_RS15160	0.50	-1.6
3,311,110	-		LRK53_RS15160	0.50	-0.3
3,311,110	-		LRK53_RS15160	0.50	-0.0
3,311,110	-		LRK53_RS15160	0.50	-0.1
3,311,110	-		LRK53_RS15160	0.50	-1.9
3,311,110	-		LRK53_RS15160	0.50	+0.3
3,311,145	+		LRK53_RS15160	0.53	+0.4
3,311,145	+		LRK53_RS15160	0.53	-0.8
3,311,145	+		LRK53_RS15160	0.53	-0.9
3,311,145	+		LRK53_RS15160	0.53	-0.3
3,311,146	-		LRK53_RS15160	0.53	-1.1
3,311,172	+		LRK53_RS15160	0.55	-1.9
3,311,172	+		LRK53_RS15160	0.55	-1.1
3,311,172	+		LRK53_RS15160	0.55	+0.7
3,311,172	+		LRK53_RS15160	0.55	+1.3
3,311,172	+		LRK53_RS15160	0.55	-0.3
3,311,172	+		LRK53_RS15160	0.55	-0.7
3,311,173	-		LRK53_RS15160	0.56	-0.3
3,311,380	-		LRK53_RS15160	0.72	-0.3
3,311,417	-		LRK53_RS15160	0.75	-0.3
3,311,418	+		LRK53_RS15160	0.76	+0.3
3,311,418	+		LRK53_RS15160	0.76	-0.7
3,311,418	+		LRK53_RS15160	0.76	+0.9
3,311,418	+		LRK53_RS15160	0.76	-1.9
3,311,418	+		LRK53_RS15160	0.76	-0.0
3,311,418	+		LRK53_RS15160	0.76	+0.3
3,311,418	+		LRK53_RS15160	0.76	-1.4
3,311,418	+		LRK53_RS15160	0.76	-0.6
3,311,418	+		LRK53_RS15160	0.76	-1.6
3,311,418	+		LRK53_RS15160	0.76	-0.4
3,311,418	+		LRK53_RS15160	0.76	+0.3
3,311,418	+		LRK53_RS15160	0.76	+0.3
3,311,418	+		LRK53_RS15160	0.76	+0.5
3,311,418	+		LRK53_RS15160	0.76	+0.4
3,311,418	+		LRK53_RS15160	0.76	-1.1
3,311,418	+		LRK53_RS15160	0.76	-1.4
3,311,418	+		LRK53_RS15160	0.76	+0.6
3,311,418	+		LRK53_RS15160	0.76	-1.1
3,311,418	+		LRK53_RS15160	0.76	-0.6
3,311,418	+		LRK53_RS15160	0.76	+0.3
3,311,418	+		LRK53_RS15160	0.76	+0.3
3,311,418	+		LRK53_RS15160	0.76	-0.0
3,311,418	+		LRK53_RS15160	0.76	-1.3
3,311,418	+		LRK53_RS15160	0.76	-3.3
3,311,418	+		LRK53_RS15160	0.76	-1.1
3,311,418	+		LRK53_RS15160	0.76	+1.5
3,311,418	+		LRK53_RS15160	0.76	-1.0
3,311,419	-		LRK53_RS15160	0.76	-0.2
3,311,419	-		LRK53_RS15160	0.76	-1.1
3,311,419	-		LRK53_RS15160	0.76	-0.1
3,311,419	-		LRK53_RS15160	0.76	-1.6
3,311,419	-		LRK53_RS15160	0.76	+0.3
3,311,419	-		LRK53_RS15160	0.76	-0.6
3,311,419	-		LRK53_RS15160	0.76	+0.5
3,311,419	-		LRK53_RS15160	0.76	-0.5
3,311,419	-		LRK53_RS15160	0.76	-0.9
3,311,419	-		LRK53_RS15160	0.76	-0.0
3,311,419	-		LRK53_RS15160	0.76	-1.3
3,311,419	-		LRK53_RS15160	0.76	+0.5
3,311,419	-		LRK53_RS15160	0.76	-0.3
3,311,424	+		LRK53_RS15160	0.76	+2.8
3,311,424	+		LRK53_RS15160	0.76	-0.7
3,311,721	+				-0.7
3,311,722	-				-1.1
3,311,732	+				-1.3
3,311,732	+				-0.7
3,311,732	+				+0.2
3,311,732	+				-1.6
3,311,732	+				-2.2
3,311,732	+				+0.5
3,311,733	-				-2.4
3,311,733	-				+0.7
3,311,733	-				-1.4
3,311,733	-				-2.3
3,311,733	-				-0.9
3,311,811	+				-0.3
3,311,811	+				-0.1
3,311,811	+				+1.3
3,311,811	+				-0.1
3,311,811	+				-2.1
3,311,811	+				+3.3
3,311,812	-				-0.5
3,311,812	-				-0.1
3,311,812	-				-1.4
3,311,812	-				+0.3
3,311,862	+		LRK53_RS15165	0.17	-1.9
3,311,862	+		LRK53_RS15165	0.17	-0.3
3,311,862	+		LRK53_RS15165	0.17	-1.4
3,311,862	+		LRK53_RS15165	0.17	+0.0
3,311,862	+		LRK53_RS15165	0.17	-1.9
3,311,862	+		LRK53_RS15165	0.17	-0.6
3,311,863	-		LRK53_RS15165	0.17	-1.3
3,311,863	-		LRK53_RS15165	0.17	-0.6
3,311,863	-		LRK53_RS15165	0.17	-1.2
3,311,863	-		LRK53_RS15165	0.17	-3.1
3,311,863	-		LRK53_RS15165	0.17	-0.3
3,311,904	+		LRK53_RS15165	0.24	-0.6
3,311,904	+		LRK53_RS15165	0.24	+0.6
3,311,905	-		LRK53_RS15165	0.24	-0.3
3,311,905	-		LRK53_RS15165	0.24	+1.7
3,312,035	+		LRK53_RS15165	0.44	-0.9
3,312,035	+		LRK53_RS15165	0.44	+2.6
3,312,035	+		LRK53_RS15165	0.44	-0.7
3,312,035	+		LRK53_RS15165	0.44	-0.3
3,312,035	+		LRK53_RS15165	0.44	+0.7
3,312,036	-		LRK53_RS15165	0.44	+0.2
3,312,036	-		LRK53_RS15165	0.44	-0.3
3,312,074	+		LRK53_RS15165	0.50	-1.1
3,312,074	+		LRK53_RS15165	0.50	-0.6
3,312,075	-		LRK53_RS15165	0.50	-2.3
3,312,075	-		LRK53_RS15165	0.50	+0.3
3,312,077	-		LRK53_RS15165	0.51	+1.3
3,312,418	+				-0.3
3,312,496	+		LRK53_RS15170	0.17	-0.3
3,312,496	+		LRK53_RS15170	0.17	-1.7
3,312,557	-		LRK53_RS15170	0.31	-0.3
3,312,562	+		LRK53_RS15170	0.32	+0.7
3,312,562	+		LRK53_RS15170	0.32	-0.8
3,312,562	+		LRK53_RS15170	0.32	-0.3
3,312,562	+		LRK53_RS15170	0.32	-0.9
3,312,562	+		LRK53_RS15170	0.32	+1.3
3,312,562	+		LRK53_RS15170	0.32	-1.4
3,312,563	-		LRK53_RS15170	0.33	-1.6
3,312,563	-		LRK53_RS15170	0.33	+0.8
3,312,722	-		LRK53_RS15170	0.70	-1.2
3,312,819	+				+1.7
3,312,820	-				+0.3
3,312,820	-				-1.7
3,312,820	-				+0.7
3,312,898	+		LRK53_RS15175	0.13	-1.1
3,312,898	+		LRK53_RS15175	0.13	-1.3
3,312,899	-		LRK53_RS15175	0.13	-1.7
3,312,918	+		LRK53_RS15175	0.18	-0.2
3,312,919	-		LRK53_RS15175	0.18	-0.3
3,312,919	-		LRK53_RS15175	0.18	-0.4
3,312,919	-		LRK53_RS15175	0.18	-0.0
3,312,919	-		LRK53_RS15175	0.18	-0.6
3,313,006	-		LRK53_RS15175	0.40	+0.1
3,313,006	-		LRK53_RS15175	0.40	-0.2
3,313,138	-		LRK53_RS15175	0.72	-0.7
3,313,138	-		LRK53_RS15175	0.72	-1.3