Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS15010

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
3,279,695	+		LRK53_RS15005	0.32	-0.6
3,279,695	+		LRK53_RS15005	0.32	-2.5
3,279,695	+		LRK53_RS15005	0.32	+0.2
3,279,695	+		LRK53_RS15005	0.32	-1.1
3,279,696	-		LRK53_RS15005	0.32	+0.2
3,279,696	-		LRK53_RS15005	0.32	+2.2
3,279,745	+		LRK53_RS15005	0.36	+0.6
3,279,745	+		LRK53_RS15005	0.36	+1.6
3,279,746	-		LRK53_RS15005	0.36	-0.4
3,279,754	+		LRK53_RS15005	0.37	+1.2
3,279,782	-		LRK53_RS15005	0.39	+0.2
3,280,003	+		LRK53_RS15005	0.56	-1.1
3,280,004	-		LRK53_RS15005	0.56	-0.1
3,280,004	-		LRK53_RS15005	0.56	-1.8
3,280,417	+		LRK53_RS15005	0.89	-1.2
3,280,418	-		LRK53_RS15005	0.89	+1.4
3,280,675	+				+0.5
3,280,675	+				-1.9
3,280,675	+				-0.7
3,280,675	+				+0.9
3,280,675	+				-2.5
3,280,675	+				+1.2
3,280,675	+				+2.6
3,280,675	+				+1.8
3,280,675	+				-0.9
3,280,676	-				-0.4
3,280,696	+				-1.4
3,280,696	+				-1.4
3,280,696	+				-0.6
3,280,696	+				+0.1
3,280,696	+				-1.9
3,280,697	-				-1.8
3,280,697	-				+0.6
3,280,697	-				-0.8
3,280,733	+				-0.1
3,280,733	+				-1.6
3,280,733	+				-1.2
3,280,733	+				+0.6
3,280,733	+				-0.1
3,280,733	+				-0.1
3,280,733	+				+1.1
3,280,734	-				-1.6
3,280,734	-				+0.8
3,280,734	-				+1.2
3,280,734	-				-0.4
3,280,741	+				+0.3
3,280,741	+				-0.5
3,280,741	+				-0.2
3,280,741	+				-0.8
3,280,741	+				-0.5
3,280,741	+				-1.4
3,280,741	+				+0.2
3,280,741	+				+0.1
3,280,742	-				-1.2
3,280,742	-				+0.1
3,280,742	-				-1.1
3,280,742	-				+1.8
3,280,742	-				-0.6
3,281,331	-		LRK53_RS15010	0.31	-0.3
3,281,331	-		LRK53_RS15010	0.31	+2.8
3,281,336	+		LRK53_RS15010	0.31	+0.7
3,281,336	+		LRK53_RS15010	0.31	+1.2
3,281,336	+		LRK53_RS15010	0.31	+0.2
3,281,336	+		LRK53_RS15010	0.31	-0.9
3,281,336	+		LRK53_RS15010	0.31	+0.2
3,281,336	+		LRK53_RS15010	0.31	+0.2
3,281,337	-		LRK53_RS15010	0.32	-0.5
3,281,337	-		LRK53_RS15010	0.32	+0.2
3,281,337	-		LRK53_RS15010	0.32	-0.3
3,281,337	-		LRK53_RS15010	0.32	+0.8
3,281,513	+		LRK53_RS15010	0.40	+0.0
3,281,513	+		LRK53_RS15010	0.40	+1.2
3,281,514	-		LRK53_RS15010	0.40	+1.2
3,281,514	-		LRK53_RS15010	0.40	-1.1
3,281,514	-		LRK53_RS15010	0.40	-0.2
3,281,514	-		LRK53_RS15010	0.40	+1.2
3,281,514	-		LRK53_RS15010	0.40	-0.6
3,281,514	-		LRK53_RS15010	0.40	-1.6
3,281,514	-		LRK53_RS15010	0.40	-0.8
3,281,548	-		LRK53_RS15010	0.42	-1.8
3,282,054	+		LRK53_RS15010	0.66	+0.7
3,282,054	+		LRK53_RS15010	0.66	+0.2
3,282,054	+		LRK53_RS15010	0.66	-0.1
3,282,054	+		LRK53_RS15010	0.66	-1.1
3,282,054	+		LRK53_RS15010	0.66	-0.0
3,282,055	-		LRK53_RS15010	0.66	-0.5
3,282,055	-		LRK53_RS15010	0.66	+0.2
3,282,055	-		LRK53_RS15010	0.66	-1.2
3,282,055	-		LRK53_RS15010	0.66	-1.1
3,282,055	-		LRK53_RS15010	0.66	+1.8
3,282,055	-		LRK53_RS15010	0.66	-0.9
3,282,055	-		LRK53_RS15010	0.66	-1.1
3,282,055	-		LRK53_RS15010	0.66	-0.6
3,282,055	-		LRK53_RS15010	0.66	+0.8
3,282,056	+		LRK53_RS15010	0.66	-0.3
3,282,056	+		LRK53_RS15010	0.66	+0.7
3,282,056	+		LRK53_RS15010	0.66	+1.7
3,282,056	+		LRK53_RS15010	0.66	+0.7
3,282,056	+		LRK53_RS15010	0.66	+1.7
3,282,056	+		LRK53_RS15010	0.66	-1.2
3,282,056	+		LRK53_RS15010	0.66	-1.1
3,282,056	+		LRK53_RS15010	0.66	-1.1
3,282,056	+		LRK53_RS15010	0.66	+0.5
3,282,056	+		LRK53_RS15010	0.66	-0.3
3,282,056	+		LRK53_RS15010	0.66	+0.1
3,282,056	+		LRK53_RS15010	0.66	+1.2
3,282,056	+		LRK53_RS15010	0.66	-1.6
3,282,056	+		LRK53_RS15010	0.66	-0.1
3,282,056	+		LRK53_RS15010	0.66	+0.8
3,282,057	-		LRK53_RS15010	0.66	+0.5
3,282,057	-		LRK53_RS15010	0.66	+1.2
3,282,057	-		LRK53_RS15010	0.66	-1.9
3,282,057	-		LRK53_RS15010	0.66	+0.1
3,282,057	-		LRK53_RS15010	0.66	+0.3
3,282,057	-		LRK53_RS15010	0.66	-1.2
3,282,057	-		LRK53_RS15010	0.66	+1.1
3,282,057	-		LRK53_RS15010	0.66	+1.2
3,282,057	-		LRK53_RS15010	0.66	-2.1
3,282,057	-		LRK53_RS15010	0.66	-0.6
3,282,198	-		LRK53_RS15010	0.73	-0.8
3,282,590	+				-1.6
3,282,590	+				-0.1
3,282,590	+				-0.8
3,282,590	+				-0.3
3,282,591	-				+2.2
3,282,591	-				-0.6
3,282,591	-				+1.2
3,282,591	-				-0.3
3,282,748	+				-0.7
3,282,748	+				+2.2
3,282,748	+				-0.5
3,282,748	+				-0.8
3,282,749	-				-0.1
3,282,749	-				-0.1
3,282,749	-				+0.7
3,282,749	-				-0.3
3,282,749	-				-1.5
3,282,749	-				-0.8
3,282,749	-				-3.5
3,282,749	-				+0.1
3,282,749	-				-0.3
3,282,751	+				-1.1
3,282,751	+				-1.1
3,282,751	+				+0.2
3,282,751	+				+0.6
3,282,751	+				-0.0
3,282,751	+				+0.2
3,282,751	+				-0.3
3,282,751	+				+0.1
3,282,751	+				+0.2
3,282,751	+				-0.1
3,282,751	+				-1.2
3,282,752	-				-1.5
3,282,752	-				-0.2
3,282,752	-				-1.1
3,282,752	-				-1.6
3,282,752	-				-1.1
3,282,752	-				+0.4
3,282,752	-				-1.2
3,282,752	-				-0.3
3,282,752	-				-0.2
3,282,752	-				-1.2
3,282,752	-				-0.4
3,282,752	-				-0.5
3,282,752	-				-0.9
3,282,752	-				+0.3
3,282,752	-				-2.0
3,282,752	-				+0.1
3,282,752	-				-1.1
3,282,752	-				-0.8
3,282,752	-				-0.6
3,282,879	-				-1.1
3,282,879	-				-1.1
3,282,884	+				-0.6
3,282,884	+				-1.1
3,282,884	+				-0.1
3,282,884	+				+0.4
3,282,884	+				+0.2
3,282,884	+				-1.1
3,282,884	+				+0.9
3,282,884	+				-2.8
3,282,884	+				+0.6
3,282,884	+				-0.8
3,282,884	+				-1.6
3,282,885	-				-0.4
3,282,885	-				+0.7
3,282,885	-				-2.8
3,282,911	+		LRK53_RS15015	0.11	+1.7
3,282,911	+		LRK53_RS15015	0.11	-1.1
3,282,911	+		LRK53_RS15015	0.11	-1.2
3,282,911	+		LRK53_RS15015	0.11	-0.7
3,282,911	+		LRK53_RS15015	0.11	-0.1
3,282,911	+		LRK53_RS15015	0.11	+2.2
3,282,911	+		LRK53_RS15015	0.11	+0.8
3,282,911	+		LRK53_RS15015	0.11	-2.1
3,282,911	+		LRK53_RS15015	0.11	-0.1
3,282,911	+		LRK53_RS15015	0.11	-0.7
3,282,912	-		LRK53_RS15015	0.11	+1.2
3,282,912	-		LRK53_RS15015	0.11	-1.3
3,282,912	-		LRK53_RS15015	0.11	+0.7
3,282,912	-		LRK53_RS15015	0.11	-1.0
3,282,912	-		LRK53_RS15015	0.11	-0.0
3,282,912	-		LRK53_RS15015	0.11	+1.6
3,282,912	-		LRK53_RS15015	0.11	-0.7
3,282,912	-		LRK53_RS15015	0.11	+2.6
3,282,912	-		LRK53_RS15015	0.11	+0.2
3,282,912	-		LRK53_RS15015	0.11	-1.9
3,282,912	-		LRK53_RS15015	0.11	-0.3
3,282,912	-		LRK53_RS15015	0.11	+1.2
3,282,912	-		LRK53_RS15015	0.11	-1.7
3,282,912	-		LRK53_RS15015	0.11	+0.7
3,282,912	-		LRK53_RS15015	0.11	+0.9
3,282,953	+		LRK53_RS15015	0.15	-1.4
3,282,953	+		LRK53_RS15015	0.15	-0.2
3,282,953	+		LRK53_RS15015	0.15	+1.2
3,282,953	+		LRK53_RS15015	0.15	-0.7
3,282,953	+		LRK53_RS15015	0.15	+1.4
3,282,953	+		LRK53_RS15015	0.15	-1.9
3,282,953	+		LRK53_RS15015	0.15	-0.1
3,282,953	+		LRK53_RS15015	0.15	+0.4
3,282,953	+		LRK53_RS15015	0.15	-0.8
3,282,953	+		LRK53_RS15015	0.15	+1.2
3,282,953	+		LRK53_RS15015	0.15	-1.3
3,282,953	+		LRK53_RS15015	0.15	-1.8
3,282,953	+		LRK53_RS15015	0.15	+0.8
3,282,953	+		LRK53_RS15015	0.15	+1.2
3,282,954	-		LRK53_RS15015	0.15	-2.3
3,282,954	-		LRK53_RS15015	0.15	-0.2
3,282,954	-		LRK53_RS15015	0.15	-0.6
3,282,954	-		LRK53_RS15015	0.15	-0.7
3,282,954	-		LRK53_RS15015	0.15	-0.3
3,282,954	-		LRK53_RS15015	0.15	-1.8
3,282,954	-		LRK53_RS15015	0.15	-1.0
3,282,954	-		LRK53_RS15015	0.15	+0.3
3,282,954	-		LRK53_RS15015	0.15	-0.8
3,282,954	-		LRK53_RS15015	0.15	+1.2
3,282,954	-		LRK53_RS15015	0.15	-1.1
3,282,954	-		LRK53_RS15015	0.15	-0.8
3,282,954	-		LRK53_RS15015	0.15	-0.8
3,282,954	-		LRK53_RS15015	0.15	+0.5
3,282,954	-		LRK53_RS15015	0.15	-1.9
3,282,954	-		LRK53_RS15015	0.15	+0.2
3,282,954	-		LRK53_RS15015	0.15	+1.0
3,282,954	-		LRK53_RS15015	0.15	+0.2
3,283,202	-		LRK53_RS15015	0.37	-1.1
3,283,202	-		LRK53_RS15015	0.37	-0.2
3,283,202	-		LRK53_RS15015	0.37	-0.8
3,283,289	+		LRK53_RS15015	0.44	-0.7
3,283,289	+		LRK53_RS15015	0.44	-0.7
3,283,290	-		LRK53_RS15015	0.45	+1.3
3,283,290	-		LRK53_RS15015	0.45	+0.2
3,283,290	-		LRK53_RS15015	0.45	+0.7
3,283,290	-		LRK53_RS15015	0.45	-1.1
3,283,352	-		LRK53_RS15015	0.50	-0.8
3,283,352	-		LRK53_RS15015	0.50	+0.7
3,283,661	+		LRK53_RS15015	0.77	-0.3
3,283,661	+		LRK53_RS15015	0.77	-2.2
3,283,661	+		LRK53_RS15015	0.77	-0.3
3,283,661	+		LRK53_RS15015	0.77	-1.1
3,283,661	+		LRK53_RS15015	0.77	+0.8
3,283,661	+		LRK53_RS15015	0.77	-0.2
3,283,662	-		LRK53_RS15015	0.77	-1.4
3,283,662	-		LRK53_RS15015	0.77	+1.5
3,283,662	-		LRK53_RS15015	0.77	-1.3
3,283,662	-		LRK53_RS15015	0.77	-0.2
3,283,662	-		LRK53_RS15015	0.77	+0.7
3,283,662	-		LRK53_RS15015	0.77	+0.7
3,283,663	+		LRK53_RS15015	0.77	-0.8
3,283,663	+		LRK53_RS15015	0.77	-0.2
3,283,663	+		LRK53_RS15015	0.77	+1.2
3,283,664	-		LRK53_RS15015	0.77	-1.8
3,283,664	-		LRK53_RS15015	0.77	-0.3
3,283,664	-		LRK53_RS15015	0.77	-0.0
3,283,664	-		LRK53_RS15015	0.77	-1.2
3,283,664	-		LRK53_RS15015	0.77	+1.6
3,283,721	+		LRK53_RS15015	0.82	+0.3
3,283,721	+		LRK53_RS15015	0.82	-0.3
3,283,721	+		LRK53_RS15015	0.82	-1.0
3,283,722	-		LRK53_RS15015	0.82	-0.6
3,283,722	-		LRK53_RS15015	0.82	+0.7