Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS14735

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
3,224,748	+		LRK53_RS14730	0.44	+0.8
3,224,748	+		LRK53_RS14730	0.44	-1.2
3,224,749	-		LRK53_RS14730	0.44	-0.2
3,224,749	-		LRK53_RS14730	0.44	+0.2
3,224,749	-		LRK53_RS14730	0.44	+0.0
3,224,749	-		LRK53_RS14730	0.44	-0.1
3,224,794	-		LRK53_RS14730	0.47	-0.8
3,224,799	+		LRK53_RS14730	0.48	-0.5
3,225,093	+		LRK53_RS14730	0.71	-1.4
3,225,093	+		LRK53_RS14730	0.71	+0.1
3,225,093	+		LRK53_RS14730	0.71	-0.9
3,225,093	+		LRK53_RS14730	0.71	-2.5
3,225,094	-		LRK53_RS14730	0.71	-1.2
3,225,142	+		LRK53_RS14730	0.75	-1.0
3,225,142	+		LRK53_RS14730	0.75	+0.4
3,225,142	+		LRK53_RS14730	0.75	+0.5
3,225,142	+		LRK53_RS14730	0.75	+0.6
3,225,142	+		LRK53_RS14730	0.75	-0.8
3,225,142	+		LRK53_RS14730	0.75	+1.4
3,225,142	+		LRK53_RS14730	0.75	-2.1
3,225,142	+		LRK53_RS14730	0.75	-0.4
3,225,143	-		LRK53_RS14730	0.75	+1.4
3,225,143	-		LRK53_RS14730	0.75	-0.2
3,225,165	+		LRK53_RS14730	0.77	-0.1
3,225,165	+		LRK53_RS14730	0.77	-1.6
3,225,165	+		LRK53_RS14730	0.77	-0.4
3,225,165	+		LRK53_RS14730	0.77	-0.4
3,225,166	-		LRK53_RS14730	0.77	-0.4
3,225,166	-		LRK53_RS14730	0.77	+1.4
3,225,166	-		LRK53_RS14730	0.77	-0.3
3,225,166	-		LRK53_RS14730	0.77	-0.2
3,225,461	-				+1.6
3,225,644	+				-0.1
3,225,652	+				+0.2
3,225,653	-				+0.8
3,225,653	-				+3.4
3,225,661	+				-1.0
3,225,778	+				-0.1
3,225,778	+				+0.4
3,225,778	+				-1.0
3,225,778	+				-0.0
3,225,778	+				+1.9
3,225,778	+				-0.6
3,225,841	+		LRK53_RS14735	0.11	-0.4
3,225,842	-		LRK53_RS14735	0.11	+0.8
3,225,984	+		LRK53_RS14735	0.20	-0.2
3,225,984	+		LRK53_RS14735	0.20	-1.2
3,225,985	-		LRK53_RS14735	0.20	-1.4
3,225,985	-		LRK53_RS14735	0.20	-2.1
3,227,235	+				-0.0
3,227,264	+				-1.0
3,227,264	+				-0.2
3,227,264	+				+0.4
3,227,264	+				-1.0
3,227,264	+				-0.9
3,227,264	+				-2.2
3,227,264	+				-0.9
3,227,264	+				-2.0
3,227,264	+				-1.1
3,227,264	+				-0.5
3,227,264	+				-0.6
3,227,264	+				+2.4
3,227,264	+				+0.9
3,227,264	+				-0.2
3,227,264	+				+1.8
3,227,264	+				+0.5
3,227,264	+				-2.1
3,227,264	+				-0.2
3,227,264	+				+0.0
3,227,264	+				+0.9
3,227,264	+				-1.7
3,227,264	+				+2.8
3,227,264	+				+0.5
3,227,264	+				-1.8
3,227,264	+				+0.7
3,227,264	+				-0.8
3,227,264	+				-1.0
3,227,264	+				+0.8
3,227,264	+				+1.0
3,227,264	+				+0.5
3,227,264	+				+0.4
3,227,264	+				-0.1
3,227,264	+				+0.4
3,227,264	+				-0.1
3,227,264	+				-0.1
3,227,264	+				-0.5
3,227,264	+				+2.9
3,227,264	+				+0.3
3,227,264	+				-1.3
3,227,264	+				+0.9
3,227,264	+				+1.0
3,227,264	+				-1.4
3,227,264	+				-0.4
3,227,264	+				-1.2
3,227,264	+				+0.0
3,227,264	+				-0.1
3,227,264	+				+0.8
3,227,264	+				+0.8
3,227,264	+				+0.2
3,227,264	+				-1.6
3,227,264	+				-0.5
3,227,264	+				-0.2
3,227,264	+				+0.1
3,227,264	+				+0.1
3,227,264	+				-0.4
3,227,264	+				+0.6
3,227,264	+				-0.4
3,227,264	+				+0.6
3,227,264	+				-0.4
3,227,264	+				-0.2
3,227,264	+				-0.5
3,227,264	+				-1.2
3,227,264	+				-1.0
3,227,264	+				-0.1
3,227,264	+				-1.0
3,227,264	+				+0.2
3,227,264	+				-0.6
3,227,264	+				+0.1
3,227,264	+				-0.7
3,227,264	+				-0.6
3,227,264	+				-1.1
3,227,264	+				-0.8
3,227,264	+				-0.7
3,227,264	+				-0.7
3,227,264	+				-0.3
3,227,264	+				-0.4
3,227,264	+				+0.8
3,227,264	+				-1.2
3,227,264	+				+0.6
3,227,264	+				+2.4
3,227,264	+				-1.2
3,227,264	+				+0.4
3,227,264	+				-0.8
3,227,264	+				-0.5
3,227,264	+				-1.5
3,227,265	-				-1.8
3,227,265	-				+1.0
3,227,265	-				+1.4
3,227,265	-				+1.4
3,227,265	-				+0.9
3,227,265	-				+0.4
3,227,265	-				-0.3
3,227,265	-				+0.1
3,227,265	-				-1.6
3,227,265	-				+0.4
3,227,265	-				+1.8
3,227,265	-				+0.0
3,227,265	-				-0.2
3,227,265	-				-1.2
3,227,265	-				-3.3
3,227,265	-				+0.7
3,227,265	-				-0.3
3,227,265	-				-1.0
3,227,265	-				-0.6
3,227,265	-				+1.4
3,227,265	-				-1.2
3,227,265	-				+0.2
3,227,265	-				-0.2
3,227,265	-				-0.2
3,227,265	-				-0.4
3,227,265	-				+0.4
3,227,265	-				-0.8
3,227,265	-				-2.5
3,227,265	-				-0.5
3,227,265	-				-0.1
3,227,265	-				+2.0
3,227,265	-				+1.4
3,227,265	-				-2.3
3,227,265	-				-0.8
3,227,265	-				-0.8
3,227,265	-				+0.3
3,227,265	-				-0.2
3,227,265	-				-2.5
3,227,265	-				-0.4
3,227,265	-				+0.0
3,227,265	-				-1.2
3,227,265	-				+0.0
3,227,265	-				-0.5
3,227,265	-				+0.2
3,227,265	-				-1.0
3,227,265	-				+1.4
3,227,265	-				+0.2
3,227,265	-				-0.2
3,227,265	-				+1.7
3,227,265	-				+0.4
3,227,265	-				-1.1
3,227,265	-				+0.1
3,227,265	-				+0.5
3,227,265	-				+0.0
3,227,265	-				-0.5
3,227,265	-				-0.1
3,227,265	-				+0.4
3,227,265	-				-0.2
3,227,265	-				+0.0
3,227,265	-				+1.9
3,227,265	-				-1.3
3,227,265	-				-0.4
3,227,265	-				-0.4
3,227,265	-				-0.1
3,227,265	-				-1.2
3,227,265	-				-0.8
3,227,265	-				-1.2
3,227,265	-				+0.8
3,227,265	-				-1.0
3,227,292	+				-0.4
3,227,471	-		LRK53_RS14740	0.19	-1.8
3,227,471	-		LRK53_RS14740	0.19	-0.5
3,227,471	-		LRK53_RS14740	0.19	-1.5
3,227,471	-		LRK53_RS14740	0.19	-0.2
3,227,471	-		LRK53_RS14740	0.19	+0.4
3,227,471	-		LRK53_RS14740	0.19	-0.5
3,227,536	+		LRK53_RS14740	0.27	-0.2
3,227,536	+		LRK53_RS14740	0.27	+0.3
3,227,536	+		LRK53_RS14740	0.27	+0.5
3,227,536	+		LRK53_RS14740	0.27	-0.6
3,227,536	+		LRK53_RS14740	0.27	+1.4
3,227,536	+		LRK53_RS14740	0.27	+0.1
3,227,536	+		LRK53_RS14740	0.27	+1.4
3,227,537	-		LRK53_RS14740	0.27	-0.9
3,227,537	-		LRK53_RS14740	0.27	-1.3
3,227,710	+		LRK53_RS14740	0.50	+0.4
3,227,710	+		LRK53_RS14740	0.50	-0.7
3,227,710	+		LRK53_RS14740	0.50	-0.2
3,227,710	+		LRK53_RS14740	0.50	-0.5
3,227,710	+		LRK53_RS14740	0.50	+0.9
3,227,717	+		LRK53_RS14740	0.51	-0.2
3,227,717	+		LRK53_RS14740	0.51	+1.9
3,227,717	+		LRK53_RS14740	0.51	-1.1
3,227,717	+		LRK53_RS14740	0.51	-0.3
3,227,718	-		LRK53_RS14740	0.51	+1.8
3,227,791	+		LRK53_RS14740	0.61	-2.2
3,227,791	+		LRK53_RS14740	0.61	+0.8
3,227,791	+		LRK53_RS14740	0.61	-0.6
3,227,791	+		LRK53_RS14740	0.61	-1.2
3,227,791	+		LRK53_RS14740	0.61	-1.9
3,227,791	+		LRK53_RS14740	0.61	+2.4
3,227,791	+		LRK53_RS14740	0.61	+2.4
3,227,791	+		LRK53_RS14740	0.61	-1.0
3,227,791	+		LRK53_RS14740	0.61	-1.6
3,227,791	+		LRK53_RS14740	0.61	-0.6
3,227,791	+		LRK53_RS14740	0.61	-0.6
3,227,791	+		LRK53_RS14740	0.61	+0.3
3,227,791	+		LRK53_RS14740	0.61	-0.8
3,227,791	+		LRK53_RS14740	0.61	+1.4
3,227,791	+		LRK53_RS14740	0.61	-0.2
3,227,969	-		LRK53_RS14740	0.84	-0.3
3,228,048	-				+0.6
3,228,170	+				-0.4
3,228,170	+				-1.6
3,228,170	+				+2.2
3,228,170	+				-0.6
3,228,170	+				-2.2
3,228,170	+				-0.2
3,228,170	+				-1.8
3,228,170	+				+0.8
3,228,170	+				+1.9
3,228,170	+				+0.4
3,228,170	+				+0.1
3,228,170	+				-1.0
3,228,170	+				-0.4
3,228,170	+				-0.5
3,228,170	+				-0.8
3,228,170	+				+0.4
3,228,170	+				-0.0
3,228,170	+				+0.2
3,228,170	+				+1.0
3,228,170	+				+0.8
3,228,170	+				-3.0
3,228,171	-				-0.2
3,228,171	-				-0.8
3,228,171	-				-1.0
3,228,171	-				-0.1
3,228,171	-				-0.4
3,228,171	-				-2.2
3,228,171	-				-0.8
3,228,171	-				+0.0
3,228,171	-				-1.1
3,228,171	-				-0.2
3,228,171	-				-2.7
3,228,171	-				-0.2
3,228,171	-				+1.4
3,228,171	-				-1.5
3,228,171	-				-0.4
3,228,171	-				-1.2
3,228,171	-				+0.9
3,228,171	-				+0.8
3,228,171	-				-0.4
3,228,171	-				+1.4
3,228,171	-				-2.1
3,228,171	-				-0.5
3,228,171	-				-1.8
3,228,171	-				-0.4
3,228,171	-				-0.4
3,228,171	-				+0.5
3,228,171	-				+0.4
3,228,172	+				-1.0
3,228,172	+				+0.2
3,228,172	+				-1.0
3,228,172	+				+1.7
3,228,172	+				-0.5
3,228,172	+				-1.0
3,228,172	+				+0.2
3,228,172	+				+0.1
3,228,173	-				+0.5
3,228,173	-				+1.2
3,228,173	-				-1.0
3,228,173	-				-0.2
3,228,173	-				-2.0
3,228,173	-				-0.7
3,228,173	-				-1.2
3,228,173	-				+0.8
3,228,173	-				-1.6
3,228,173	-				-0.8
3,228,173	-				+0.9
3,228,183	+				+2.9
3,228,183	+				-0.6
3,228,184	-				+0.4
3,228,184	-				-0.8
3,228,184	-				-1.6
3,228,184	-				+0.1