Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS14155

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
3,106,386	-				+0.2
3,106,398	+				+0.9
3,106,399	-				-2.0
3,106,399	-				+1.2
3,106,399	-				+2.2
3,106,465	+				-0.3
3,106,465	+				+1.2
3,106,465	+				-1.0
3,106,465	+				-0.0
3,106,465	+				+1.4
3,106,465	+				-2.3
3,106,465	+				+0.2
3,106,465	+				-1.1
3,106,466	-				+3.5
3,106,466	-				-0.4
3,106,466	-				+0.8
3,106,702	+		LRK53_RS14150	0.32	+0.4
3,106,703	-		LRK53_RS14150	0.32	-1.1
3,106,703	-		LRK53_RS14150	0.32	+1.2
3,106,703	-		LRK53_RS14150	0.32	+0.3
3,106,703	-		LRK53_RS14150	0.32	-1.2
3,106,703	-		LRK53_RS14150	0.32	+1.0
3,106,729	+		LRK53_RS14150	0.35	-0.1
3,106,729	+		LRK53_RS14150	0.35	-1.1
3,106,729	+		LRK53_RS14150	0.35	+1.2
3,106,729	+		LRK53_RS14150	0.35	-0.4
3,106,729	+		LRK53_RS14150	0.35	-1.0
3,106,730	-		LRK53_RS14150	0.35	-1.3
3,106,730	-		LRK53_RS14150	0.35	+0.0
3,106,730	-		LRK53_RS14150	0.35	+1.2
3,106,730	-		LRK53_RS14150	0.35	-1.8
3,106,730	-		LRK53_RS14150	0.35	-0.1
3,106,730	-		LRK53_RS14150	0.35	-0.4
3,106,730	-		LRK53_RS14150	0.35	-0.8
3,106,730	-		LRK53_RS14150	0.35	-1.9
3,106,994	-		LRK53_RS14150	0.67	+0.2
3,107,210	+				+0.0
3,107,210	+				-1.1
3,107,211	-				-1.4
3,107,296	+				-0.6
3,107,296	+				+1.8
3,107,297	-				-0.8
3,107,297	-				-1.1
3,107,297	-				+0.2
3,107,301	+				+0.2
3,107,301	+				-1.2
3,107,301	+				+1.5
3,107,301	+				+0.2
3,107,301	+				-2.1
3,107,301	+				-0.7
3,107,301	+				+0.6
3,107,301	+				+0.8
3,107,301	+				-1.2
3,107,301	+				-0.4
3,107,301	+				-1.1
3,107,301	+				-1.4
3,107,301	+				-0.2
3,107,301	+				-0.3
3,107,302	-				-0.4
3,107,302	-				-0.4
3,107,302	-				-0.2
3,107,302	-				+0.0
3,107,302	-				-0.0
3,107,302	-				-0.0
3,107,302	-				-1.1
3,107,302	-				+0.5
3,107,302	-				+0.8
3,107,302	-				-2.4
3,107,302	-				+0.2
3,107,302	-				-1.7
3,107,302	-				-1.7
3,107,302	-				+0.5
3,107,349	+				+1.2
3,107,349	+				+0.5
3,107,349	+				-0.4
3,107,349	+				+1.2
3,107,350	-				+0.2
3,107,350	-				-0.8
3,107,512	+		LRK53_RS14155	0.11	+1.2
3,107,512	+		LRK53_RS14155	0.11	-1.7
3,107,512	+		LRK53_RS14155	0.11	+1.2
3,107,512	+		LRK53_RS14155	0.11	-0.3
3,107,512	+		LRK53_RS14155	0.11	-0.8
3,107,512	+		LRK53_RS14155	0.11	-2.3
3,107,512	+		LRK53_RS14155	0.11	+0.3
3,107,512	+		LRK53_RS14155	0.11	-0.7
3,107,512	+		LRK53_RS14155	0.11	-0.8
3,107,512	+		LRK53_RS14155	0.11	-1.1
3,107,512	+		LRK53_RS14155	0.11	+0.2
3,107,512	+		LRK53_RS14155	0.11	-0.0
3,107,512	+		LRK53_RS14155	0.11	+0.7
3,107,512	+		LRK53_RS14155	0.11	+0.2
3,107,512	+		LRK53_RS14155	0.11	+0.1
3,107,512	+		LRK53_RS14155	0.11	+1.2
3,107,512	+		LRK53_RS14155	0.11	-0.6
3,107,512	+		LRK53_RS14155	0.11	-0.3
3,107,512	+		LRK53_RS14155	0.11	+0.2
3,107,512	+		LRK53_RS14155	0.11	-0.7
3,107,512	+		LRK53_RS14155	0.11	+0.0
3,107,513	-		LRK53_RS14155	0.11	+1.8
3,107,513	-		LRK53_RS14155	0.11	-0.6
3,107,513	-		LRK53_RS14155	0.11	+0.2
3,107,513	-		LRK53_RS14155	0.11	-2.0
3,107,513	-		LRK53_RS14155	0.11	+1.5
3,107,513	-		LRK53_RS14155	0.11	+1.2
3,107,513	-		LRK53_RS14155	0.11	+0.7
3,107,513	-		LRK53_RS14155	0.11	-2.3
3,107,513	-		LRK53_RS14155	0.11	-0.8
3,107,513	-		LRK53_RS14155	0.11	-0.8
3,107,513	-		LRK53_RS14155	0.11	+1.8
3,107,513	-		LRK53_RS14155	0.11	+1.1
3,107,513	-		LRK53_RS14155	0.11	-0.4
3,107,513	-		LRK53_RS14155	0.11	-1.0
3,107,513	-		LRK53_RS14155	0.11	-3.0
3,107,513	-		LRK53_RS14155	0.11	-0.4
3,107,513	-		LRK53_RS14155	0.11	+0.4
3,107,513	-		LRK53_RS14155	0.11	-0.4
3,107,513	-		LRK53_RS14155	0.11	-0.5
3,107,531	+		LRK53_RS14155	0.13	+1.2
3,107,531	+		LRK53_RS14155	0.13	-0.4
3,107,532	-		LRK53_RS14155	0.13	-1.1
3,107,644	+		LRK53_RS14155	0.23	+0.1
3,107,645	-		LRK53_RS14155	0.23	+0.2
3,107,645	-		LRK53_RS14155	0.23	+1.8
3,107,645	-		LRK53_RS14155	0.23	+0.7
3,107,645	-		LRK53_RS14155	0.23	+0.3
3,107,671	+		LRK53_RS14155	0.25	-0.1
3,107,672	-		LRK53_RS14155	0.25	-0.7
3,107,672	-		LRK53_RS14155	0.25	-0.4
3,107,672	-		LRK53_RS14155	0.25	-0.8
3,107,672	-		LRK53_RS14155	0.25	-2.6
3,107,673	+		LRK53_RS14155	0.25	+0.2
3,107,673	+		LRK53_RS14155	0.25	+1.5
3,107,673	+		LRK53_RS14155	0.25	-0.1
3,107,673	+		LRK53_RS14155	0.25	-0.9
3,107,674	-		LRK53_RS14155	0.25	-0.2
3,107,767	+		LRK53_RS14155	0.34	+0.5
3,107,767	+		LRK53_RS14155	0.34	-1.2
3,107,767	+		LRK53_RS14155	0.34	-0.0
3,107,768	-		LRK53_RS14155	0.34	-0.1
3,107,776	+		LRK53_RS14155	0.34	+1.2
3,107,777	-		LRK53_RS14155	0.34	+0.6
3,107,974	+		LRK53_RS14155	0.52	-1.8
3,107,974	+		LRK53_RS14155	0.52	+0.4
3,107,974	+		LRK53_RS14155	0.52	-0.5
3,107,974	+		LRK53_RS14155	0.52	+0.8
3,107,974	+		LRK53_RS14155	0.52	+1.2
3,107,974	+		LRK53_RS14155	0.52	-2.0
3,107,974	+		LRK53_RS14155	0.52	-2.2
3,107,974	+		LRK53_RS14155	0.52	+1.2
3,107,974	+		LRK53_RS14155	0.52	-1.1
3,107,974	+		LRK53_RS14155	0.52	-0.5
3,107,974	+		LRK53_RS14155	0.52	+1.2
3,107,974	+		LRK53_RS14155	0.52	+0.9
3,107,974	+		LRK53_RS14155	0.52	-1.4
3,107,975	-		LRK53_RS14155	0.52	-1.4
3,107,975	-		LRK53_RS14155	0.52	+0.1
3,107,975	-		LRK53_RS14155	0.52	-1.8
3,107,975	-		LRK53_RS14155	0.52	+1.8
3,107,975	-		LRK53_RS14155	0.52	+0.5
3,107,975	-		LRK53_RS14155	0.52	-1.1
3,107,975	-		LRK53_RS14155	0.52	+0.4
3,107,975	-		LRK53_RS14155	0.52	-1.4
3,107,975	-		LRK53_RS14155	0.52	+1.9
3,107,975	-		LRK53_RS14155	0.52	+0.5
3,107,975	-		LRK53_RS14155	0.52	-0.0
3,107,975	-		LRK53_RS14155	0.52	+1.2
3,107,975	-		LRK53_RS14155	0.52	-0.1
3,107,975	-		LRK53_RS14155	0.52	+1.2
3,107,975	-		LRK53_RS14155	0.52	-0.4
3,107,975	-		LRK53_RS14155	0.52	-2.0
3,107,975	-		LRK53_RS14155	0.52	-0.6
3,107,980	+		LRK53_RS14155	0.52	-0.8
3,107,980	+		LRK53_RS14155	0.52	-1.8
3,107,980	+		LRK53_RS14155	0.52	+2.2
3,108,030	-		LRK53_RS14155	0.57	-0.9
3,108,046	+		LRK53_RS14155	0.58	+0.1
3,108,298	+		LRK53_RS14155	0.80	-0.7
3,108,299	-		LRK53_RS14155	0.80	-2.0
3,108,299	-		LRK53_RS14155	0.80	-2.4
3,108,322	+		LRK53_RS14155	0.82	+1.6
3,108,322	+		LRK53_RS14155	0.82	+1.5
3,108,322	+		LRK53_RS14155	0.82	-0.7
3,108,322	+		LRK53_RS14155	0.82	+0.1
3,108,322	+		LRK53_RS14155	0.82	-1.6
3,108,322	+		LRK53_RS14155	0.82	+0.4
3,108,323	-		LRK53_RS14155	0.82	+1.2
3,108,323	-		LRK53_RS14155	0.82	-1.6
3,108,323	-		LRK53_RS14155	0.82	-0.4
3,108,323	-		LRK53_RS14155	0.82	-1.9
3,108,323	-		LRK53_RS14155	0.82	+0.2
3,108,323	-		LRK53_RS14155	0.82	+1.2
3,108,323	-		LRK53_RS14155	0.82	+1.4
3,108,329	+		LRK53_RS14155	0.83	+1.2
3,108,329	+		LRK53_RS14155	0.83	+0.2
3,108,329	+		LRK53_RS14155	0.83	-0.4
3,108,329	+		LRK53_RS14155	0.83	+0.0
3,108,330	-		LRK53_RS14155	0.83	-0.8
3,108,330	-		LRK53_RS14155	0.83	-0.8
3,108,330	-		LRK53_RS14155	0.83	+0.4
3,108,330	-		LRK53_RS14155	0.83	-0.7
3,108,330	-		LRK53_RS14155	0.83	-0.3
3,108,330	-		LRK53_RS14155	0.83	+0.4
3,108,330	-		LRK53_RS14155	0.83	-2.0
3,108,330	-		LRK53_RS14155	0.83	+0.2
3,108,330	-		LRK53_RS14155	0.83	-0.2
3,108,421	+				-0.1
3,108,421	+				+0.4
3,108,421	+				+0.2
3,108,422	-				+0.3
3,108,422	-				-0.4
3,108,422	-				+1.2
3,108,422	-				-0.1
3,108,470	+				-0.8
3,108,471	-				-0.4
3,108,471	-				-0.8
3,108,471	-				+0.1
3,108,524	-				-0.2
3,108,831	+				-0.3
3,108,879	-				-0.4
3,108,881	+				-1.1
3,108,881	+				-0.8
3,108,881	+				-1.1
3,108,881	+				-1.6
3,108,881	+				-1.0
3,108,881	+				-0.1
3,108,881	+				-0.6
3,108,882	-				+2.8
3,108,882	-				-2.5
3,108,882	-				-0.4
3,108,882	-				-0.0
3,108,882	-				-0.2
3,108,882	-				-0.4
3,108,882	-				-2.0
3,108,882	-				-0.4
3,108,882	-				-0.2
3,108,882	-				+1.2
3,109,200	-		LRK53_RS14160	0.32	-0.0
3,109,200	-		LRK53_RS14160	0.32	-0.0
3,109,361	+		LRK53_RS14160	0.45	-0.0
3,109,361	+		LRK53_RS14160	0.45	-0.8
3,109,361	+		LRK53_RS14160	0.45	-0.5
3,109,361	+		LRK53_RS14160	0.45	-1.1
3,109,361	+		LRK53_RS14160	0.45	-0.4
3,109,361	+		LRK53_RS14160	0.45	+0.9
3,109,361	+		LRK53_RS14160	0.45	-0.2
3,109,361	+		LRK53_RS14160	0.45	+0.3
3,109,361	+		LRK53_RS14160	0.45	+1.2
3,109,361	+		LRK53_RS14160	0.45	-1.3
3,109,361	+		LRK53_RS14160	0.45	+0.4
3,109,362	-		LRK53_RS14160	0.45	+0.5
3,109,362	-		LRK53_RS14160	0.45	-0.8
3,109,362	-		LRK53_RS14160	0.45	+1.0
3,109,362	-		LRK53_RS14160	0.45	-0.1
3,109,362	-		LRK53_RS14160	0.45	+0.1
3,109,362	-		LRK53_RS14160	0.45	+1.5
3,109,362	-		LRK53_RS14160	0.45	-0.3
3,109,362	-		LRK53_RS14160	0.45	-0.2
3,109,362	-		LRK53_RS14160	0.45	+0.6
3,109,362	-		LRK53_RS14160	0.45	+0.8
3,109,362	-		LRK53_RS14160	0.45	-2.4
3,109,362	-		LRK53_RS14160	0.45	-0.4
3,109,362	-		LRK53_RS14160	0.45	-0.8
3,109,362	-		LRK53_RS14160	0.45	+1.6
3,109,439	+		LRK53_RS14160	0.51	-0.9
3,109,440	-		LRK53_RS14160	0.51	-0.1