Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS14140

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
3,104,616	+		LRK53_RS14130	0.39	-1.1
3,104,617	-		LRK53_RS14130	0.39	+0.7
3,104,706	-		LRK53_RS14130	0.57	-1.0
3,104,706	-		LRK53_RS14130	0.57	-0.3
3,104,826	+		LRK53_RS14130	0.81	-1.0
3,104,987	+		LRK53_RS14135	0.16	-0.1
3,104,987	+		LRK53_RS14135	0.16	-1.6
3,104,987	+		LRK53_RS14135	0.16	-0.3
3,104,987	+		LRK53_RS14135	0.16	-2.0
3,104,987	+		LRK53_RS14135	0.16	-0.4
3,104,987	+		LRK53_RS14135	0.16	-0.8
3,104,987	+		LRK53_RS14135	0.16	-0.4
3,104,988	-		LRK53_RS14135	0.17	+0.5
3,104,988	-		LRK53_RS14135	0.17	+0.7
3,104,988	-		LRK53_RS14135	0.17	-0.4
3,104,988	-		LRK53_RS14135	0.17	-3.1
3,104,988	-		LRK53_RS14135	0.17	-0.8
3,105,072	-		LRK53_RS14135	0.54	+1.8
3,105,072	-		LRK53_RS14135	0.54	-2.0
3,105,072	-		LRK53_RS14135	0.54	-0.6
3,105,104	+		LRK53_RS14135	0.68	+0.4
3,105,104	+		LRK53_RS14135	0.68	+0.5
3,105,104	+		LRK53_RS14135	0.68	+1.2
3,105,105	-		LRK53_RS14135	0.68	+0.3
3,105,105	-		LRK53_RS14135	0.68	+0.7
3,105,105	-		LRK53_RS14135	0.68	+0.5
3,105,170	+				-1.1
3,105,170	+				-2.1
3,105,171	-				-1.2
3,105,171	-				-1.4
3,105,171	-				-2.3
3,105,316	+				-2.3
3,105,316	+				-1.1
3,105,316	+				-0.4
3,105,316	+				+1.2
3,105,316	+				+0.1
3,105,316	+				-1.7
3,105,316	+				+0.1
3,105,316	+				+0.8
3,105,317	-				+0.1
3,105,317	-				-0.7
3,105,317	-				+0.4
3,105,317	-				-0.8
3,105,362	+		LRK53_RS14140	0.14	+1.5
3,105,362	+		LRK53_RS14140	0.14	-1.6
3,105,362	+		LRK53_RS14140	0.14	+1.2
3,105,363	-		LRK53_RS14140	0.14	-0.1
3,105,363	-		LRK53_RS14140	0.14	+1.2
3,105,365	+		LRK53_RS14140	0.14	+0.9
3,105,365	+		LRK53_RS14140	0.14	-2.0
3,105,365	+		LRK53_RS14140	0.14	+0.6
3,105,365	+		LRK53_RS14140	0.14	-2.2
3,105,366	-		LRK53_RS14140	0.14	+1.2
3,105,366	-		LRK53_RS14140	0.14	-1.9
3,105,637	+		LRK53_RS14140	0.60	-1.0
3,105,638	-		LRK53_RS14140	0.60	-0.4
3,105,638	-		LRK53_RS14140	0.60	-1.3
3,105,638	-		LRK53_RS14140	0.60	-1.2
3,105,646	+		LRK53_RS14140	0.62	-2.0
3,105,646	+		LRK53_RS14140	0.62	+0.8
3,105,646	+		LRK53_RS14140	0.62	-1.1
3,105,646	+		LRK53_RS14140	0.62	-0.7
3,105,646	+		LRK53_RS14140	0.62	-2.8
3,105,647	-		LRK53_RS14140	0.62	-1.0
3,105,647	-		LRK53_RS14140	0.62	-0.1
3,105,647	-		LRK53_RS14140	0.62	-0.1
3,105,647	-		LRK53_RS14140	0.62	-0.6
3,105,647	-		LRK53_RS14140	0.62	-1.0
3,105,647	-		LRK53_RS14140	0.62	-1.0
3,105,652	+		LRK53_RS14140	0.63	+1.2
3,105,652	+		LRK53_RS14140	0.63	-1.6
3,105,652	+		LRK53_RS14140	0.63	+0.0
3,105,652	+		LRK53_RS14140	0.63	+0.2
3,105,652	+		LRK53_RS14140	0.63	+0.4
3,105,652	+		LRK53_RS14140	0.63	+0.2
3,105,653	-		LRK53_RS14140	0.63	-0.1
3,105,653	-		LRK53_RS14140	0.63	+0.9
3,105,653	-		LRK53_RS14140	0.63	+0.9
3,105,653	-		LRK53_RS14140	0.63	-1.8
3,105,653	-		LRK53_RS14140	0.63	-1.1
3,105,653	-		LRK53_RS14140	0.63	-1.5
3,105,739	+		LRK53_RS14140	0.77	-0.1
3,105,739	+		LRK53_RS14140	0.77	+0.0
3,105,835	+				+0.8
3,105,958	+				-0.2
3,105,958	+				+1.2
3,105,958	+				-1.3
3,105,958	+				-0.1
3,105,958	+				+0.4
3,105,958	+				-0.7
3,105,958	+				-2.1
3,105,959	-				+0.2
3,105,959	-				+0.4
3,105,959	-				-1.0
3,106,075	+		LRK53_RS14145	0.30	-0.4
3,106,076	-		LRK53_RS14145	0.30	-2.5
3,106,076	-		LRK53_RS14145	0.30	-0.4
3,106,156	+		LRK53_RS14145	0.48	-0.8
3,106,156	+		LRK53_RS14145	0.48	-2.1
3,106,156	+		LRK53_RS14145	0.48	-0.4
3,106,249	+		LRK53_RS14145	0.68	-0.4
3,106,250	-		LRK53_RS14145	0.68	-1.0
3,106,327	+		LRK53_RS14145	0.85	-1.8
3,106,327	+		LRK53_RS14145	0.85	+0.7
3,106,327	+		LRK53_RS14145	0.85	-0.7
3,106,327	+		LRK53_RS14145	0.85	-0.4
3,106,327	+		LRK53_RS14145	0.85	-0.0
3,106,327	+		LRK53_RS14145	0.85	-0.7
3,106,327	+		LRK53_RS14145	0.85	+0.4
3,106,327	+		LRK53_RS14145	0.85	-0.7
3,106,327	+		LRK53_RS14145	0.85	-0.4
3,106,327	+		LRK53_RS14145	0.85	-0.7
3,106,327	+		LRK53_RS14145	0.85	-1.1
3,106,327	+		LRK53_RS14145	0.85	-1.0
3,106,327	+		LRK53_RS14145	0.85	-0.5
3,106,327	+		LRK53_RS14145	0.85	-1.1
3,106,327	+		LRK53_RS14145	0.85	-1.6
3,106,327	+		LRK53_RS14145	0.85	+0.2
3,106,327	+		LRK53_RS14145	0.85	-0.6
3,106,327	+		LRK53_RS14145	0.85	+0.7
3,106,327	+		LRK53_RS14145	0.85	-0.6
3,106,327	+		LRK53_RS14145	0.85	-0.0
3,106,327	+		LRK53_RS14145	0.85	-0.0
3,106,327	+		LRK53_RS14145	0.85	-0.1
3,106,327	+		LRK53_RS14145	0.85	-1.4
3,106,327	+		LRK53_RS14145	0.85	-1.1
3,106,327	+		LRK53_RS14145	0.85	-0.5
3,106,327	+		LRK53_RS14145	0.85	-1.1
3,106,327	+		LRK53_RS14145	0.85	+0.3
3,106,327	+		LRK53_RS14145	0.85	-0.4
3,106,327	+		LRK53_RS14145	0.85	-1.8
3,106,327	+		LRK53_RS14145	0.85	-0.2
3,106,327	+		LRK53_RS14145	0.85	-0.4
3,106,327	+		LRK53_RS14145	0.85	-2.3
3,106,327	+		LRK53_RS14145	0.85	-0.9
3,106,327	+		LRK53_RS14145	0.85	+1.9
3,106,327	+		LRK53_RS14145	0.85	-0.1
3,106,327	+		LRK53_RS14145	0.85	+0.9
3,106,327	+		LRK53_RS14145	0.85	+0.4
3,106,327	+		LRK53_RS14145	0.85	-1.6
3,106,327	+		LRK53_RS14145	0.85	-0.7
3,106,327	+		LRK53_RS14145	0.85	-0.4
3,106,327	+		LRK53_RS14145	0.85	-0.7
3,106,327	+		LRK53_RS14145	0.85	-1.9
3,106,327	+		LRK53_RS14145	0.85	-0.8
3,106,327	+		LRK53_RS14145	0.85	+0.9
3,106,327	+		LRK53_RS14145	0.85	-0.4
3,106,327	+		LRK53_RS14145	0.85	-0.9
3,106,327	+		LRK53_RS14145	0.85	-0.1
3,106,327	+		LRK53_RS14145	0.85	-0.7
3,106,327	+		LRK53_RS14145	0.85	-0.5
3,106,327	+		LRK53_RS14145	0.85	+0.2
3,106,327	+		LRK53_RS14145	0.85	-1.7
3,106,327	+		LRK53_RS14145	0.85	-0.0
3,106,327	+		LRK53_RS14145	0.85	+0.4
3,106,327	+		LRK53_RS14145	0.85	-0.3
3,106,327	+		LRK53_RS14145	0.85	-0.4
3,106,327	+		LRK53_RS14145	0.85	-0.4
3,106,327	+		LRK53_RS14145	0.85	-0.4
3,106,327	+		LRK53_RS14145	0.85	-1.8
3,106,327	+		LRK53_RS14145	0.85	-0.4
3,106,327	+		LRK53_RS14145	0.85	-2.4
3,106,327	+		LRK53_RS14145	0.85	+0.9
3,106,327	+		LRK53_RS14145	0.85	-0.0
3,106,328	-		LRK53_RS14145	0.85	-1.0
3,106,328	-		LRK53_RS14145	0.85	-0.7
3,106,328	-		LRK53_RS14145	0.85	+1.0
3,106,328	-		LRK53_RS14145	0.85	-2.0
3,106,328	-		LRK53_RS14145	0.85	+0.2
3,106,328	-		LRK53_RS14145	0.85	-0.4
3,106,328	-		LRK53_RS14145	0.85	-1.8
3,106,328	-		LRK53_RS14145	0.85	+1.2
3,106,328	-		LRK53_RS14145	0.85	+1.0
3,106,328	-		LRK53_RS14145	0.85	+1.4
3,106,328	-		LRK53_RS14145	0.85	+2.2
3,106,328	-		LRK53_RS14145	0.85	-0.8
3,106,328	-		LRK53_RS14145	0.85	-0.2
3,106,328	-		LRK53_RS14145	0.85	+0.2
3,106,328	-		LRK53_RS14145	0.85	-0.4
3,106,328	-		LRK53_RS14145	0.85	-2.1
3,106,328	-		LRK53_RS14145	0.85	+1.2
3,106,328	-		LRK53_RS14145	0.85	-0.1
3,106,328	-		LRK53_RS14145	0.85	-0.2
3,106,328	-		LRK53_RS14145	0.85	-3.0
3,106,328	-		LRK53_RS14145	0.85	-0.3
3,106,328	-		LRK53_RS14145	0.85	-0.9
3,106,328	-		LRK53_RS14145	0.85	-0.9
3,106,328	-		LRK53_RS14145	0.85	-1.4
3,106,328	-		LRK53_RS14145	0.85	+0.5
3,106,328	-		LRK53_RS14145	0.85	-0.2
3,106,328	-		LRK53_RS14145	0.85	+0.2
3,106,328	-		LRK53_RS14145	0.85	-1.1
3,106,328	-		LRK53_RS14145	0.85	-1.4
3,106,328	-		LRK53_RS14145	0.85	+0.5
3,106,328	-		LRK53_RS14145	0.85	-0.5
3,106,328	-		LRK53_RS14145	0.85	+0.3
3,106,328	-		LRK53_RS14145	0.85	-0.5
3,106,328	-		LRK53_RS14145	0.85	-0.4
3,106,328	-		LRK53_RS14145	0.85	-0.7
3,106,328	-		LRK53_RS14145	0.85	+2.2
3,106,328	-		LRK53_RS14145	0.85	-0.4
3,106,328	-		LRK53_RS14145	0.85	-0.4
3,106,328	-		LRK53_RS14145	0.85	-2.1
3,106,328	-		LRK53_RS14145	0.85	+0.3
3,106,328	-		LRK53_RS14145	0.85	+0.8
3,106,328	-		LRK53_RS14145	0.85	-0.1
3,106,328	-		LRK53_RS14145	0.85	-1.1
3,106,328	-		LRK53_RS14145	0.85	-0.0
3,106,328	-		LRK53_RS14145	0.85	-0.1
3,106,328	-		LRK53_RS14145	0.85	+0.2
3,106,328	-		LRK53_RS14145	0.85	-0.2
3,106,328	-		LRK53_RS14145	0.85	-0.6
3,106,328	-		LRK53_RS14145	0.85	-0.6
3,106,328	-		LRK53_RS14145	0.85	-0.6
3,106,328	-		LRK53_RS14145	0.85	-0.7
3,106,328	-		LRK53_RS14145	0.85	-1.8
3,106,328	-		LRK53_RS14145	0.85	-0.6
3,106,328	-		LRK53_RS14145	0.85	-1.1
3,106,328	-		LRK53_RS14145	0.85	+0.3
3,106,328	-		LRK53_RS14145	0.85	-2.1
3,106,328	-		LRK53_RS14145	0.85	+0.2
3,106,328	-		LRK53_RS14145	0.85	+0.3
3,106,328	-		LRK53_RS14145	0.85	+1.2
3,106,328	-		LRK53_RS14145	0.85	-0.1
3,106,328	-		LRK53_RS14145	0.85	-0.2
3,106,328	-		LRK53_RS14145	0.85	+0.2
3,106,328	-		LRK53_RS14145	0.85	-0.8
3,106,328	-		LRK53_RS14145	0.85	+0.4
3,106,328	-		LRK53_RS14145	0.85	+1.4
3,106,328	-		LRK53_RS14145	0.85	+0.5
3,106,328	-		LRK53_RS14145	0.85	-0.2
3,106,328	-		LRK53_RS14145	0.85	-0.2
3,106,328	-		LRK53_RS14145	0.85	-1.8
3,106,328	-		LRK53_RS14145	0.85	-0.8
3,106,328	-		LRK53_RS14145	0.85	+0.9
3,106,328	-		LRK53_RS14145	0.85	+1.2
3,106,328	-		LRK53_RS14145	0.85	-0.1
3,106,328	-		LRK53_RS14145	0.85	-1.3
3,106,378	+				-0.7
3,106,379	-				+0.1
3,106,386	-				+0.2
3,106,398	+				+0.9
3,106,399	-				-2.0
3,106,399	-				+1.2
3,106,399	-				+2.2
3,106,465	+				-0.3
3,106,465	+				+1.2
3,106,465	+				-1.0
3,106,465	+				-0.0
3,106,465	+				+1.4
3,106,465	+				-2.3
3,106,465	+				+0.2
3,106,465	+				-1.1
3,106,466	-				+3.5
3,106,466	-				-0.4
3,106,466	-				+0.8
3,106,702	+		LRK53_RS14150	0.32	+0.4
3,106,703	-		LRK53_RS14150	0.32	-1.1
3,106,703	-		LRK53_RS14150	0.32	+1.2
3,106,703	-		LRK53_RS14150	0.32	+0.3
3,106,703	-		LRK53_RS14150	0.32	-1.2
3,106,703	-		LRK53_RS14150	0.32	+1.0
3,106,729	+		LRK53_RS14150	0.35	-0.1
3,106,729	+		LRK53_RS14150	0.35	-1.1
3,106,729	+		LRK53_RS14150	0.35	+1.2
3,106,729	+		LRK53_RS14150	0.35	-0.4
3,106,729	+		LRK53_RS14150	0.35	-1.0
3,106,730	-		LRK53_RS14150	0.35	-1.3
3,106,730	-		LRK53_RS14150	0.35	+0.0
3,106,730	-		LRK53_RS14150	0.35	+1.2
3,106,730	-		LRK53_RS14150	0.35	-1.8
3,106,730	-		LRK53_RS14150	0.35	-0.1
3,106,730	-		LRK53_RS14150	0.35	-0.4
3,106,730	-		LRK53_RS14150	0.35	-0.8
3,106,730	-		LRK53_RS14150	0.35	-1.9