Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS14025

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
3,084,649	+		LRK53_RS14015	0.70	+2.2
3,084,649	+		LRK53_RS14015	0.70	-0.4
3,084,649	+		LRK53_RS14015	0.70	+0.6
3,084,649	+		LRK53_RS14015	0.70	-3.1
3,084,649	+		LRK53_RS14015	0.70	+1.2
3,084,649	+		LRK53_RS14015	0.70	-2.7
3,084,649	+		LRK53_RS14015	0.70	+0.5
3,084,649	+		LRK53_RS14015	0.70	-1.3
3,084,649	+		LRK53_RS14015	0.70	-2.3
3,084,649	+		LRK53_RS14015	0.70	-0.5
3,084,649	+		LRK53_RS14015	0.70	-0.1
3,084,649	+		LRK53_RS14015	0.70	+2.2
3,084,649	+		LRK53_RS14015	0.70	+0.6
3,084,649	+		LRK53_RS14015	0.70	+0.6
3,084,649	+		LRK53_RS14015	0.70	-0.8
3,084,649	+		LRK53_RS14015	0.70	-1.1
3,084,649	+		LRK53_RS14015	0.70	-0.2
3,084,649	+		LRK53_RS14015	0.70	-0.3
3,084,649	+		LRK53_RS14015	0.70	-0.7
3,084,649	+		LRK53_RS14015	0.70	-0.5
3,084,650	-		LRK53_RS14015	0.70	-0.6
3,084,650	-		LRK53_RS14015	0.70	+0.3
3,084,650	-		LRK53_RS14015	0.70	-0.7
3,084,650	-		LRK53_RS14015	0.70	+0.2
3,084,650	-		LRK53_RS14015	0.70	-0.1
3,084,650	-		LRK53_RS14015	0.70	+0.3
3,084,650	-		LRK53_RS14015	0.70	+0.3
3,084,650	-		LRK53_RS14015	0.70	-0.4
3,084,650	-		LRK53_RS14015	0.70	-0.4
3,084,650	-		LRK53_RS14015	0.70	-0.2
3,084,650	-		LRK53_RS14015	0.70	-0.0
3,084,650	-		LRK53_RS14015	0.70	+1.0
3,084,650	-		LRK53_RS14015	0.70	-0.2
3,084,703	+		LRK53_RS14015	0.76	-0.4
3,084,703	+		LRK53_RS14015	0.76	+0.6
3,084,703	+		LRK53_RS14015	0.76	+0.5
3,084,703	+		LRK53_RS14015	0.76	+1.5
3,084,703	+		LRK53_RS14015	0.76	-2.6
3,084,703	+		LRK53_RS14015	0.76	-2.0
3,084,703	+		LRK53_RS14015	0.76	-0.6
3,084,703	+		LRK53_RS14015	0.76	-1.0
3,084,703	+		LRK53_RS14015	0.76	-0.9
3,084,703	+		LRK53_RS14015	0.76	-1.6
3,084,703	+		LRK53_RS14015	0.76	-0.7
3,084,703	+		LRK53_RS14015	0.76	-0.1
3,084,703	+		LRK53_RS14015	0.76	-1.4
3,084,703	+		LRK53_RS14015	0.76	-0.0
3,084,703	+		LRK53_RS14015	0.76	-0.6
3,084,703	+		LRK53_RS14015	0.76	+2.2
3,084,703	+		LRK53_RS14015	0.76	+0.2
3,084,703	+		LRK53_RS14015	0.76	-0.1
3,084,703	+		LRK53_RS14015	0.76	-0.6
3,084,703	+		LRK53_RS14015	0.76	-0.5
3,084,703	+		LRK53_RS14015	0.76	-1.6
3,084,703	+		LRK53_RS14015	0.76	-0.2
3,084,703	+		LRK53_RS14015	0.76	-0.4
3,084,703	+		LRK53_RS14015	0.76	-0.8
3,084,703	+		LRK53_RS14015	0.76	+0.5
3,084,703	+		LRK53_RS14015	0.76	+0.7
3,084,703	+		LRK53_RS14015	0.76	-0.9
3,084,703	+		LRK53_RS14015	0.76	+0.6
3,084,703	+		LRK53_RS14015	0.76	+1.6
3,084,703	+		LRK53_RS14015	0.76	-0.5
3,084,703	+		LRK53_RS14015	0.76	-0.9
3,084,704	-		LRK53_RS14015	0.76	-0.3
3,084,704	-		LRK53_RS14015	0.76	-2.0
3,084,704	-		LRK53_RS14015	0.76	+1.2
3,084,704	-		LRK53_RS14015	0.76	+0.2
3,084,704	-		LRK53_RS14015	0.76	+0.1
3,084,704	-		LRK53_RS14015	0.76	-0.8
3,084,704	-		LRK53_RS14015	0.76	+0.8
3,084,704	-		LRK53_RS14015	0.76	-0.9
3,084,704	-		LRK53_RS14015	0.76	-0.4
3,084,704	-		LRK53_RS14015	0.76	-0.3
3,084,704	-		LRK53_RS14015	0.76	+0.2
3,084,704	-		LRK53_RS14015	0.76	-2.0
3,084,704	-		LRK53_RS14015	0.76	-1.5
3,084,704	-		LRK53_RS14015	0.76	-0.0
3,084,704	-		LRK53_RS14015	0.76	-0.1
3,084,704	-		LRK53_RS14015	0.76	-0.4
3,084,704	-		LRK53_RS14015	0.76	-0.1
3,084,704	-		LRK53_RS14015	0.76	-0.2
3,084,704	-		LRK53_RS14015	0.76	-0.1
3,084,704	-		LRK53_RS14015	0.76	+0.7
3,084,704	-		LRK53_RS14015	0.76	+0.2
3,084,704	-		LRK53_RS14015	0.76	+3.2
3,084,704	-		LRK53_RS14015	0.76	-0.3
3,084,704	-		LRK53_RS14015	0.76	-0.2
3,084,704	-		LRK53_RS14015	0.76	-1.7
3,084,704	-		LRK53_RS14015	0.76	-2.0
3,084,704	-		LRK53_RS14015	0.76	+0.0
3,084,704	-		LRK53_RS14015	0.76	+0.2
3,084,704	-		LRK53_RS14015	0.76	-0.4
3,084,787	+		LRK53_RS14015	0.85	-0.3
3,084,787	+		LRK53_RS14015	0.85	-0.5
3,084,787	+		LRK53_RS14015	0.85	-0.2
3,084,787	+		LRK53_RS14015	0.85	-1.3
3,084,788	-		LRK53_RS14015	0.86	-1.3
3,084,788	-		LRK53_RS14015	0.86	-0.3
3,084,788	-		LRK53_RS14015	0.86	+0.1
3,084,788	-		LRK53_RS14015	0.86	-0.9
3,084,798	+		LRK53_RS14015	0.87	+0.5
3,084,798	+		LRK53_RS14015	0.87	-0.8
3,084,798	+		LRK53_RS14015	0.87	+2.2
3,084,914	+				-1.3
3,084,914	+				-0.6
3,084,914	+				-0.4
3,084,914	+				-0.8
3,084,914	+				-0.4
3,084,914	+				-0.3
3,084,914	+				-0.2
3,084,914	+				-0.7
3,084,914	+				-0.4
3,084,914	+				-1.8
3,084,914	+				-0.8
3,084,914	+				-1.1
3,084,914	+				-0.5
3,084,915	-				+0.2
3,084,915	-				-0.6
3,084,915	-				-1.6
3,084,915	-				+0.4
3,084,915	-				-1.4
3,084,915	-				-0.8
3,084,915	-				-0.8
3,084,915	-				+0.6
3,084,938	+				-0.1
3,084,938	+				-0.7
3,084,938	+				-0.4
3,084,938	+				-1.6
3,084,938	+				-1.1
3,084,938	+				+0.2
3,084,938	+				-0.7
3,084,938	+				+0.1
3,084,938	+				+0.3
3,084,938	+				+1.2
3,084,938	+				-1.3
3,084,938	+				-0.1
3,084,938	+				+1.7
3,084,938	+				-0.0
3,084,938	+				-0.7
3,084,938	+				+0.4
3,084,938	+				-1.4
3,084,938	+				+0.5
3,084,938	+				-1.5
3,084,938	+				+0.4
3,084,938	+				-1.1
3,084,938	+				+0.2
3,084,938	+				-1.4
3,084,938	+				+0.9
3,084,938	+				-0.1
3,084,938	+				+1.2
3,084,938	+				-1.4
3,084,938	+				-1.0
3,084,938	+				+0.0
3,084,938	+				+0.5
3,084,938	+				+0.7
3,084,938	+				+1.2
3,084,938	+				-0.1
3,084,938	+				-1.3
3,084,938	+				-1.4
3,084,938	+				-0.8
3,084,938	+				+0.3
3,084,938	+				-0.6
3,084,938	+				-0.2
3,084,938	+				-0.5
3,084,938	+				-1.8
3,084,938	+				-1.8
3,084,939	-				-0.9
3,084,939	-				-0.7
3,084,939	-				-0.4
3,084,939	-				-0.4
3,084,939	-				-0.4
3,084,939	-				+0.9
3,084,939	-				-1.7
3,084,939	-				-1.6
3,084,939	-				-1.6
3,084,939	-				-0.7
3,084,939	-				-0.4
3,084,939	-				+0.3
3,084,939	-				-1.6
3,084,939	-				-0.9
3,084,939	-				-0.8
3,084,939	-				-0.2
3,084,939	-				-0.7
3,084,939	-				-1.5
3,084,939	-				-1.3
3,084,939	-				-1.1
3,084,939	-				-0.4
3,084,939	-				-0.3
3,084,939	-				+0.5
3,084,939	-				-0.6
3,084,939	-				-1.1
3,085,028	+		LRK53_RS14020	0.26	-1.6
3,085,028	+		LRK53_RS14020	0.26	-0.5
3,085,028	+		LRK53_RS14020	0.26	-0.4
3,085,028	+		LRK53_RS14020	0.26	-0.8
3,085,028	+		LRK53_RS14020	0.26	-1.7
3,085,028	+		LRK53_RS14020	0.26	-0.1
3,085,028	+		LRK53_RS14020	0.26	-0.0
3,085,028	+		LRK53_RS14020	0.26	+0.6
3,085,028	+		LRK53_RS14020	0.26	+0.2
3,085,028	+		LRK53_RS14020	0.26	-0.0
3,085,028	+		LRK53_RS14020	0.26	+1.6
3,085,028	+		LRK53_RS14020	0.26	-0.3
3,085,028	+		LRK53_RS14020	0.26	-1.1
3,085,028	+		LRK53_RS14020	0.26	+0.5
3,085,028	+		LRK53_RS14020	0.26	+0.3
3,085,028	+		LRK53_RS14020	0.26	-0.4
3,085,028	+		LRK53_RS14020	0.26	-1.0
3,085,029	-		LRK53_RS14020	0.26	-0.0
3,085,029	-		LRK53_RS14020	0.26	-0.0
3,085,029	-		LRK53_RS14020	0.26	-0.5
3,085,029	-		LRK53_RS14020	0.26	-2.7
3,085,029	-		LRK53_RS14020	0.26	+0.6
3,085,029	-		LRK53_RS14020	0.26	-0.2
3,085,029	-		LRK53_RS14020	0.26	+0.1
3,085,029	-		LRK53_RS14020	0.26	-0.2
3,085,029	-		LRK53_RS14020	0.26	+0.2
3,085,029	-		LRK53_RS14020	0.26	-1.0
3,085,029	-		LRK53_RS14020	0.26	-0.4
3,085,029	-		LRK53_RS14020	0.26	-1.1
3,085,029	-		LRK53_RS14020	0.26	-0.5
3,085,029	-		LRK53_RS14020	0.26	+2.2
3,085,029	-		LRK53_RS14020	0.26	-0.0
3,085,043	+		LRK53_RS14020	0.30	-0.6
3,085,043	+		LRK53_RS14020	0.30	-0.5
3,085,043	+		LRK53_RS14020	0.30	+0.1
3,085,043	+		LRK53_RS14020	0.30	-0.6
3,085,044	-		LRK53_RS14020	0.30	-0.5
3,085,044	-		LRK53_RS14020	0.30	+1.2
3,085,044	-		LRK53_RS14020	0.30	-0.7
3,085,044	-		LRK53_RS14020	0.30	+4.4
3,085,044	-		LRK53_RS14020	0.30	-1.1
3,085,044	-		LRK53_RS14020	0.30	-0.8
3,085,044	-		LRK53_RS14020	0.30	+3.0
3,085,044	-		LRK53_RS14020	0.30	-2.3
3,085,044	-		LRK53_RS14020	0.30	-0.7
3,085,058	+		LRK53_RS14020	0.34	-0.5
3,085,058	+		LRK53_RS14020	0.34	+0.9
3,085,058	+		LRK53_RS14020	0.34	+0.6
3,085,058	+		LRK53_RS14020	0.34	+1.2
3,085,058	+		LRK53_RS14020	0.34	-0.4
3,085,058	+		LRK53_RS14020	0.34	-1.0
3,085,058	+		LRK53_RS14020	0.34	+1.2
3,085,058	+		LRK53_RS14020	0.34	-1.6
3,085,058	+		LRK53_RS14020	0.34	+0.3
3,085,058	+		LRK53_RS14020	0.34	-0.4
3,085,058	+		LRK53_RS14020	0.34	+0.7
3,085,059	-		LRK53_RS14020	0.34	-0.5
3,085,059	-		LRK53_RS14020	0.34	-0.4
3,085,059	-		LRK53_RS14020	0.34	-1.1
3,085,059	-		LRK53_RS14020	0.34	+1.2
3,085,059	-		LRK53_RS14020	0.34	-1.1
3,085,059	-		LRK53_RS14020	0.34	+0.2
3,085,121	+		LRK53_RS14020	0.50	-0.0
3,085,122	-		LRK53_RS14020	0.50	+0.7
3,085,236	+		LRK53_RS14020	0.79	+0.6
3,085,313	+				+0.6
3,085,313	+				+0.7
3,085,313	+				-0.1
3,085,313	+				-0.9
3,085,313	+				+0.2
3,085,313	+				-1.2
3,085,313	+				-0.6
3,085,313	+				+1.0
3,085,313	+				-1.4
3,085,313	+				+0.5
3,085,313	+				-1.1
3,085,313	+				-1.1
3,085,313	+				-1.1
3,085,313	+				+0.3
3,085,313	+				-0.8
3,085,313	+				+0.4
3,085,313	+				-2.6
3,085,313	+				-0.3
3,085,313	+				-0.8
3,085,313	+				-0.4
3,085,313	+				+3.2
3,085,313	+				-0.3
3,085,313	+				+1.2
3,085,313	+				-1.4
3,085,313	+				+0.1
3,085,313	+				+1.2
3,085,313	+				-1.5
3,085,313	+				+0.7
3,085,313	+				+1.2
3,085,313	+				-0.6
3,085,313	+				+1.8
3,085,313	+				-2.4
3,085,313	+				+0.1
3,085,313	+				-2.9
3,085,313	+				-1.1
3,085,313	+				-0.3
3,085,313	+				-0.4
3,085,313	+				-0.2
3,085,313	+				-1.4
3,085,313	+				+0.9
3,085,313	+				+0.6
3,085,313	+				-0.0
3,085,313	+				-0.2
3,085,313	+				+0.2
3,085,313	+				+0.2
3,085,314	-				-0.9
3,085,314	-				+0.6
3,085,314	-				-1.1
3,085,314	-				-0.8
3,085,314	-				+1.2
3,085,314	-				+1.2
3,085,314	-				-0.7
3,085,314	-				-1.5
3,085,314	-				-1.4
3,085,314	-				-1.6
3,085,314	-				-0.8
3,085,314	-				-0.6
3,085,314	-				-0.8
3,085,314	-				-0.2
3,085,314	-				-0.7
3,085,314	-				-0.8
3,085,314	-				-0.3
3,085,314	-				+2.2
3,085,314	-				-1.2
3,085,314	-				+0.7
3,085,314	-				-0.8
3,085,314	-				-1.6
3,085,314	-				-0.7
3,085,314	-				+0.2
3,085,314	-				+1.2
3,085,314	-				+0.1
3,085,314	-				-3.2
3,085,314	-				+0.1
3,085,314	-				-2.4
3,085,314	-				-1.7
3,085,314	-				-1.1
3,085,314	-				-1.3
3,085,314	-				+0.4
3,085,314	-				-0.4
3,085,314	-				+0.1
3,085,349	+				-2.1
3,085,349	+				-0.7
3,085,349	+				-0.2
3,085,349	+				-2.3
3,085,349	+				-1.4
3,085,349	+				-0.7
3,085,349	+				-1.0
3,085,349	+				-0.4
3,085,350	-				+1.9
3,085,350	-				-1.4
3,085,350	-				-1.5
3,085,350	-				+1.5
3,085,415	+				-0.8
3,085,415	+				-0.1
3,085,415	+				+1.0
3,085,415	+				-1.0
3,085,416	-				-0.7
3,085,416	-				-0.4
3,085,416	-				-0.4
3,085,416	-				+0.8
3,085,418	+				+0.2
3,085,418	+				-0.8
3,085,418	+				-0.4
3,085,419	-				-1.5
3,085,419	-				-0.6
3,085,419	-				-1.7
3,085,481	+		LRK53_RS14025	0.17	-0.1
3,085,482	-		LRK53_RS14025	0.17	+0.0
3,085,482	-		LRK53_RS14025	0.17	+0.2
3,085,529	+		LRK53_RS14025	0.24	-0.6
3,085,529	+		LRK53_RS14025	0.24	+0.3
3,085,529	+		LRK53_RS14025	0.24	-1.6
3,085,529	+		LRK53_RS14025	0.24	+1.2
3,085,529	+		LRK53_RS14025	0.24	-0.9
3,085,529	+		LRK53_RS14025	0.24	-1.1
3,085,529	+		LRK53_RS14025	0.24	-0.4
3,085,529	+		LRK53_RS14025	0.24	-1.6
3,085,529	+		LRK53_RS14025	0.24	+0.9
3,085,529	+		LRK53_RS14025	0.24	+0.2
3,085,529	+		LRK53_RS14025	0.24	-0.8
3,085,529	+		LRK53_RS14025	0.24	-1.4
3,085,530	-		LRK53_RS14025	0.24	-0.4
3,085,530	-		LRK53_RS14025	0.24	-0.2
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