Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS13875

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
3,056,670	+				-1.1
3,056,670	+				-0.9
3,056,730	+				+0.3
3,056,730	+				-2.8
3,056,730	+				+0.0
3,056,730	+				+0.3
3,056,730	+				+0.2
3,056,730	+				-0.0
3,056,730	+				-0.7
3,056,730	+				+1.0
3,056,730	+				+2.2
3,056,730	+				+1.6
3,056,730	+				-1.4
3,056,731	-				+1.2
3,056,731	-				-0.8
3,056,731	-				+0.9
3,056,731	-				+0.7
3,056,731	-				-0.4
3,056,731	-				-0.1
3,056,731	-				+1.8
3,056,731	-				-0.2
3,056,731	-				-0.1
3,056,731	-				+0.2
3,056,731	-				+0.2
3,056,739	+				+0.8
3,056,739	+				-0.4
3,056,740	-				-0.5
3,056,742	+				+1.0
3,056,742	+				-1.4
3,056,742	+				+0.2
3,056,742	+				-2.0
3,056,743	-				+0.8
3,056,743	-				-1.1
3,056,743	-				+0.7
3,056,743	-				-0.6
3,056,780	+				-1.1
3,056,781	-				-0.4
3,056,781	-				-0.8
3,056,927	+		LRK53_RS13870	0.20	+0.1
3,056,927	+		LRK53_RS13870	0.20	+0.2
3,056,927	+		LRK53_RS13870	0.20	+0.4
3,056,927	+		LRK53_RS13870	0.20	-0.3
3,056,927	+		LRK53_RS13870	0.20	+2.2
3,056,927	+		LRK53_RS13870	0.20	-0.2
3,056,927	+		LRK53_RS13870	0.20	-1.7
3,056,927	+		LRK53_RS13870	0.20	-3.4
3,056,927	+		LRK53_RS13870	0.20	-0.2
3,056,927	+		LRK53_RS13870	0.20	+0.2
3,056,927	+		LRK53_RS13870	0.20	+0.2
3,056,927	+		LRK53_RS13870	0.20	-1.8
3,056,927	+		LRK53_RS13870	0.20	-0.4
3,056,927	+		LRK53_RS13870	0.20	+1.2
3,056,927	+		LRK53_RS13870	0.20	-0.8
3,056,927	+		LRK53_RS13870	0.20	-1.5
3,056,927	+		LRK53_RS13870	0.20	-1.0
3,056,928	-		LRK53_RS13870	0.20	-0.7
3,056,928	-		LRK53_RS13870	0.20	+0.4
3,056,928	-		LRK53_RS13870	0.20	+0.8
3,056,928	-		LRK53_RS13870	0.20	-0.4
3,056,928	-		LRK53_RS13870	0.20	-0.1
3,056,928	-		LRK53_RS13870	0.20	+0.2
3,056,928	-		LRK53_RS13870	0.20	-0.5
3,056,928	-		LRK53_RS13870	0.20	-0.1
3,056,928	-		LRK53_RS13870	0.20	-0.5
3,056,928	-		LRK53_RS13870	0.20	-0.1
3,056,928	-		LRK53_RS13870	0.20	+1.5
3,056,928	-		LRK53_RS13870	0.20	-2.1
3,056,928	-		LRK53_RS13870	0.20	+2.2
3,056,928	-		LRK53_RS13870	0.20	-1.3
3,056,928	-		LRK53_RS13870	0.20	+0.2
3,056,928	-		LRK53_RS13870	0.20	-0.9
3,056,956	+		LRK53_RS13870	0.23	-0.6
3,056,956	+		LRK53_RS13870	0.23	-0.6
3,056,956	+		LRK53_RS13870	0.23	-0.4
3,056,956	+		LRK53_RS13870	0.23	+1.6
3,056,956	+		LRK53_RS13870	0.23	-0.1
3,056,956	+		LRK53_RS13870	0.23	-0.4
3,056,956	+		LRK53_RS13870	0.23	-1.5
3,056,956	+		LRK53_RS13870	0.23	-1.2
3,056,956	+		LRK53_RS13870	0.23	+2.4
3,056,956	+		LRK53_RS13870	0.23	-0.5
3,056,956	+		LRK53_RS13870	0.23	+0.2
3,056,957	-		LRK53_RS13870	0.24	-1.3
3,056,957	-		LRK53_RS13870	0.24	+1.2
3,056,957	-		LRK53_RS13870	0.24	-0.8
3,056,957	-		LRK53_RS13870	0.24	-0.7
3,057,004	+		LRK53_RS13870	0.30	+0.2
3,057,004	+		LRK53_RS13870	0.30	-0.8
3,057,004	+		LRK53_RS13870	0.30	-0.6
3,057,004	+		LRK53_RS13870	0.30	-0.1
3,057,004	+		LRK53_RS13870	0.30	+1.4
3,057,004	+		LRK53_RS13870	0.30	-0.6
3,057,004	+		LRK53_RS13870	0.30	-1.3
3,057,004	+		LRK53_RS13870	0.30	+0.1
3,057,004	+		LRK53_RS13870	0.30	+0.5
3,057,004	+		LRK53_RS13870	0.30	+0.9
3,057,004	+		LRK53_RS13870	0.30	+0.4
3,057,004	+		LRK53_RS13870	0.30	+0.0
3,057,004	+		LRK53_RS13870	0.30	-0.3
3,057,004	+		LRK53_RS13870	0.30	-0.7
3,057,004	+		LRK53_RS13870	0.30	-0.6
3,057,004	+		LRK53_RS13870	0.30	-1.1
3,057,004	+		LRK53_RS13870	0.30	+0.3
3,057,004	+		LRK53_RS13870	0.30	+1.2
3,057,004	+		LRK53_RS13870	0.30	-0.6
3,057,004	+		LRK53_RS13870	0.30	-0.4
3,057,004	+		LRK53_RS13870	0.30	-0.8
3,057,005	-		LRK53_RS13870	0.30	-0.7
3,057,005	-		LRK53_RS13870	0.30	-0.3
3,057,005	-		LRK53_RS13870	0.30	-1.1
3,057,005	-		LRK53_RS13870	0.30	+0.2
3,057,005	-		LRK53_RS13870	0.30	+0.0
3,057,005	-		LRK53_RS13870	0.30	-0.3
3,057,005	-		LRK53_RS13870	0.30	-1.8
3,057,005	-		LRK53_RS13870	0.30	+2.8
3,057,005	-		LRK53_RS13870	0.30	+1.2
3,057,005	-		LRK53_RS13870	0.30	-0.5
3,057,005	-		LRK53_RS13870	0.30	-0.4
3,057,005	-		LRK53_RS13870	0.30	-2.3
3,057,005	-		LRK53_RS13870	0.30	+0.6
3,057,005	-		LRK53_RS13870	0.30	+1.6
3,057,005	-		LRK53_RS13870	0.30	+0.2
3,057,005	-		LRK53_RS13870	0.30	+0.2
3,057,005	-		LRK53_RS13870	0.30	+0.2
3,057,022	+		LRK53_RS13870	0.32	+0.8
3,057,022	+		LRK53_RS13870	0.32	+1.6
3,057,023	-		LRK53_RS13870	0.32	+2.8
3,057,023	-		LRK53_RS13870	0.32	-0.7
3,057,023	-		LRK53_RS13870	0.32	+0.4
3,057,100	+		LRK53_RS13870	0.42	-1.0
3,057,101	-		LRK53_RS13870	0.42	-0.3
3,057,101	-		LRK53_RS13870	0.42	-0.8
3,057,112	+		LRK53_RS13870	0.43	-0.7
3,057,112	+		LRK53_RS13870	0.43	+1.2
3,057,112	+		LRK53_RS13870	0.43	+0.4
3,057,112	+		LRK53_RS13870	0.43	-0.9
3,057,112	+		LRK53_RS13870	0.43	+2.2
3,057,112	+		LRK53_RS13870	0.43	-0.8
3,057,112	+		LRK53_RS13870	0.43	-0.4
3,057,112	+		LRK53_RS13870	0.43	-1.4
3,057,112	+		LRK53_RS13870	0.43	-0.0
3,057,113	-		LRK53_RS13870	0.43	-0.2
3,057,113	-		LRK53_RS13870	0.43	-2.0
3,057,113	-		LRK53_RS13870	0.43	+0.1
3,057,113	-		LRK53_RS13870	0.43	+0.3
3,057,113	-		LRK53_RS13870	0.43	+0.6
3,057,113	-		LRK53_RS13870	0.43	-3.0
3,057,113	-		LRK53_RS13870	0.43	+0.1
3,057,113	-		LRK53_RS13870	0.43	-0.1
3,057,113	-		LRK53_RS13870	0.43	+1.2
3,057,113	-		LRK53_RS13870	0.43	+0.5
3,057,113	-		LRK53_RS13870	0.43	-0.7
3,057,113	-		LRK53_RS13870	0.43	+0.6
3,057,358	+		LRK53_RS13870	0.74	-1.6
3,057,358	+		LRK53_RS13870	0.74	+0.6
3,057,358	+		LRK53_RS13870	0.74	-0.3
3,057,358	+		LRK53_RS13870	0.74	-0.4
3,057,358	+		LRK53_RS13870	0.74	-2.6
3,057,358	+		LRK53_RS13870	0.74	-1.1
3,057,358	+		LRK53_RS13870	0.74	-0.8
3,057,358	+		LRK53_RS13870	0.74	-0.8
3,057,358	+		LRK53_RS13870	0.74	-0.3
3,057,358	+		LRK53_RS13870	0.74	-0.9
3,057,359	-		LRK53_RS13870	0.74	+0.2
3,057,359	-		LRK53_RS13870	0.74	-1.1
3,057,359	-		LRK53_RS13870	0.74	+0.2
3,057,359	-		LRK53_RS13870	0.74	-0.0
3,057,359	-		LRK53_RS13870	0.74	-1.4
3,057,359	-		LRK53_RS13870	0.74	-0.6
3,057,359	-		LRK53_RS13870	0.74	-2.3
3,057,359	-		LRK53_RS13870	0.74	-0.8
3,057,359	-		LRK53_RS13870	0.74	-2.3
3,057,424	+		LRK53_RS13870	0.83	-1.1
3,057,424	+		LRK53_RS13870	0.83	+2.2
3,057,425	-		LRK53_RS13870	0.83	+0.4
3,057,425	-		LRK53_RS13870	0.83	+0.2
3,057,425	-		LRK53_RS13870	0.83	-0.4
3,057,425	-		LRK53_RS13870	0.83	-2.3
3,057,433	+		LRK53_RS13870	0.84	-1.4
3,057,433	+		LRK53_RS13870	0.84	-1.1
3,057,433	+		LRK53_RS13870	0.84	+0.2
3,057,433	+		LRK53_RS13870	0.84	-2.1
3,057,433	+		LRK53_RS13870	0.84	+1.4
3,057,433	+		LRK53_RS13870	0.84	+1.8
3,057,433	+		LRK53_RS13870	0.84	+2.8
3,057,433	+		LRK53_RS13870	0.84	+0.1
3,057,433	+		LRK53_RS13870	0.84	-0.6
3,057,433	+		LRK53_RS13870	0.84	-1.2
3,057,434	-		LRK53_RS13870	0.84	-0.5
3,057,434	-		LRK53_RS13870	0.84	-1.8
3,057,434	-		LRK53_RS13870	0.84	-0.1
3,057,434	-		LRK53_RS13870	0.84	+0.6
3,057,434	-		LRK53_RS13870	0.84	-1.2
3,057,434	-		LRK53_RS13870	0.84	+0.1
3,057,434	-		LRK53_RS13870	0.84	+0.3
3,057,434	-		LRK53_RS13870	0.84	+2.5
3,057,434	-		LRK53_RS13870	0.84	-0.6
3,057,434	-		LRK53_RS13870	0.84	-1.0
3,057,434	-		LRK53_RS13870	0.84	-0.5
3,057,434	-		LRK53_RS13870	0.84	-1.4
3,057,532	+				-0.5
3,057,533	-				+1.4
3,057,533	-				-0.8
3,057,533	-				+0.0
3,057,533	-				+0.9
3,057,533	-				-0.4
3,057,638	+				+0.6
3,057,638	+				-0.3
3,057,638	+				+1.2
3,057,638	+				+0.5
3,057,638	+				-0.2
3,057,638	+				+0.2
3,057,639	-				-0.8
3,057,639	-				-1.6
3,057,639	-				-2.6
3,057,639	-				-0.4
3,057,639	-				-0.0
3,057,639	-				+1.4
3,057,647	+				+0.0
3,057,647	+				-1.3
3,057,647	+				+1.2
3,057,647	+				-1.6
3,057,647	+				-0.4
3,057,647	+				-0.7
3,057,647	+				+0.2
3,057,647	+				+0.1
3,057,647	+				-0.4
3,057,647	+				+0.3
3,057,647	+				-0.4
3,057,647	+				-0.6
3,057,647	+				-0.3
3,057,647	+				-1.1
3,057,647	+				-0.5
3,057,648	-				+0.7
3,057,648	-				-0.5
3,057,648	-				-1.6
3,057,648	-				-1.4
3,057,648	-				-0.1
3,057,648	-				-0.6
3,057,648	-				-0.4
3,057,648	-				-0.1
3,057,648	-				-1.4
3,057,648	-				-1.4
3,057,648	-				+1.9
3,057,648	-				-1.3
3,057,812	+		LRK53_RS13875	0.18	-0.5
3,057,812	+		LRK53_RS13875	0.18	+0.8
3,057,812	+		LRK53_RS13875	0.18	-1.1
3,057,812	+		LRK53_RS13875	0.18	+1.2
3,057,812	+		LRK53_RS13875	0.18	+0.5
3,057,812	+		LRK53_RS13875	0.18	-0.2
3,057,812	+		LRK53_RS13875	0.18	-1.5
3,057,812	+		LRK53_RS13875	0.18	-0.4
3,057,812	+		LRK53_RS13875	0.18	+0.4
3,057,812	+		LRK53_RS13875	0.18	-1.5
3,057,812	+		LRK53_RS13875	0.18	-0.2
3,057,812	+		LRK53_RS13875	0.18	-0.7
3,057,812	+		LRK53_RS13875	0.18	+1.2
3,057,812	+		LRK53_RS13875	0.18	+0.3
3,057,812	+		LRK53_RS13875	0.18	-0.5
3,057,812	+		LRK53_RS13875	0.18	-1.7
3,057,812	+		LRK53_RS13875	0.18	+0.6
3,057,812	+		LRK53_RS13875	0.18	+0.5
3,057,812	+		LRK53_RS13875	0.18	+0.0
3,057,812	+		LRK53_RS13875	0.18	-0.4
3,057,812	+		LRK53_RS13875	0.18	-0.7
3,057,813	-		LRK53_RS13875	0.18	-2.4
3,057,813	-		LRK53_RS13875	0.18	+0.4
3,057,813	-		LRK53_RS13875	0.18	+0.5
3,057,813	-		LRK53_RS13875	0.18	+2.8
3,057,813	-		LRK53_RS13875	0.18	-0.4
3,057,813	-		LRK53_RS13875	0.18	-1.1
3,057,813	-		LRK53_RS13875	0.18	+1.2
3,057,813	-		LRK53_RS13875	0.18	-0.8
3,057,813	-		LRK53_RS13875	0.18	+0.8
3,057,813	-		LRK53_RS13875	0.18	-2.0
3,057,813	-		LRK53_RS13875	0.18	+1.4
3,057,813	-		LRK53_RS13875	0.18	+0.4
3,057,813	-		LRK53_RS13875	0.18	+0.6
3,057,813	-		LRK53_RS13875	0.18	+0.9
3,057,813	-		LRK53_RS13875	0.18	-1.4
3,057,813	-		LRK53_RS13875	0.18	-1.3
3,057,813	-		LRK53_RS13875	0.18	+1.2
3,057,813	-		LRK53_RS13875	0.18	-1.4
3,057,813	-		LRK53_RS13875	0.18	+0.9
3,057,813	-		LRK53_RS13875	0.18	+0.2
3,057,813	-		LRK53_RS13875	0.18	+1.2
3,057,813	-		LRK53_RS13875	0.18	-0.1
3,057,818	+		LRK53_RS13875	0.19	-0.7
3,057,818	+		LRK53_RS13875	0.19	-1.2
3,057,818	+		LRK53_RS13875	0.19	-0.8
3,057,818	+		LRK53_RS13875	0.19	+0.1
3,057,818	+		LRK53_RS13875	0.19	+0.8
3,057,818	+		LRK53_RS13875	0.19	+1.5
3,057,818	+		LRK53_RS13875	0.19	-2.3
3,057,818	+		LRK53_RS13875	0.19	+0.7
3,057,818	+		LRK53_RS13875	0.19	-0.5
3,057,818	+		LRK53_RS13875	0.19	+0.6
3,057,818	+		LRK53_RS13875	0.19	-1.1
3,057,818	+		LRK53_RS13875	0.19	-1.1
3,057,819	-		LRK53_RS13875	0.19	+0.7
3,057,819	-		LRK53_RS13875	0.19	-0.5
3,057,819	-		LRK53_RS13875	0.19	-1.0
3,057,819	-		LRK53_RS13875	0.19	+0.4
3,057,819	-		LRK53_RS13875	0.19	-0.7
3,057,819	-		LRK53_RS13875	0.19	-0.6
3,057,819	-		LRK53_RS13875	0.19	-1.3
3,057,819	-		LRK53_RS13875	0.19	-1.6
3,057,819	-		LRK53_RS13875	0.19	-1.5
3,057,819	-		LRK53_RS13875	0.19	+1.2
3,057,819	-		LRK53_RS13875	0.19	+0.8
3,057,819	-		LRK53_RS13875	0.19	+0.6
3,057,819	-		LRK53_RS13875	0.19	-2.1
3,057,819	-		LRK53_RS13875	0.19	+1.2
3,057,819	-		LRK53_RS13875	0.19	+0.2
3,057,819	-		LRK53_RS13875	0.19	-1.4
3,057,819	-		LRK53_RS13875	0.19	+0.4
3,057,899	+		LRK53_RS13875	0.25	-1.6
3,057,899	+		LRK53_RS13875	0.25	+1.8
3,057,899	+		LRK53_RS13875	0.25	+1.2
3,057,900	-		LRK53_RS13875	0.25	-1.4
3,057,900	-		LRK53_RS13875	0.25	-1.0
3,057,900	-		LRK53_RS13875	0.25	-3.5
3,057,900	-		LRK53_RS13875	0.25	-2.3
3,057,900	-		LRK53_RS13875	0.25	-0.5
3,057,977	+		LRK53_RS13875	0.32	+1.5
3,057,977	+		LRK53_RS13875	0.32	+1.2
3,057,977	+		LRK53_RS13875	0.32	-0.3
3,057,977	+		LRK53_RS13875	0.32	-1.3
3,057,977	+		LRK53_RS13875	0.32	-1.4
3,057,977	+		LRK53_RS13875	0.32	-0.0
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