Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS13845

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
3,051,630	+		LRK53_RS13835	0.87	+1.2
3,051,630	+		LRK53_RS13835	0.87	-1.6
3,051,631	-		LRK53_RS13835	0.87	-1.2
3,051,848	+				+0.6
3,051,849	-				-0.6
3,051,863	+				-1.4
3,051,863	+				+0.2
3,051,863	+				+1.0
3,051,863	+				-1.4
3,051,863	+				-0.3
3,051,863	+				+0.2
3,051,863	+				+1.2
3,051,864	-				-0.8
3,051,864	-				-2.4
3,051,864	-				+0.6
3,051,864	-				-1.8
3,051,877	+				+0.6
3,051,964	-				+0.3
3,051,990	+				-1.4
3,051,991	-				-0.5
3,052,289	+		LRK53_RS13840	0.72	-0.4
3,052,289	+		LRK53_RS13840	0.72	+0.2
3,052,289	+		LRK53_RS13840	0.72	+0.0
3,052,289	+		LRK53_RS13840	0.72	+1.2
3,052,289	+		LRK53_RS13840	0.72	-0.8
3,052,289	+		LRK53_RS13840	0.72	-0.8
3,052,289	+		LRK53_RS13840	0.72	-0.6
3,052,289	+		LRK53_RS13840	0.72	+0.6
3,052,289	+		LRK53_RS13840	0.72	-0.1
3,052,289	+		LRK53_RS13840	0.72	-0.2
3,052,289	+		LRK53_RS13840	0.72	-1.2
3,052,290	-		LRK53_RS13840	0.73	-1.7
3,052,290	-		LRK53_RS13840	0.73	-0.4
3,052,290	-		LRK53_RS13840	0.73	+0.4
3,052,290	-		LRK53_RS13840	0.73	-1.2
3,052,290	-		LRK53_RS13840	0.73	+1.2
3,052,316	+		LRK53_RS13840	0.78	-0.3
3,052,385	+				-1.1
3,052,385	+				-0.2
3,052,385	+				-0.4
3,052,385	+				+0.2
3,052,385	+				-0.5
3,052,386	-				-1.2
3,052,386	-				+0.2
3,052,386	-				-0.5
3,052,386	-				-1.0
3,052,386	-				-1.4
3,052,665	+		LRK53_RS13845	0.13	-0.5
3,052,665	+		LRK53_RS13845	0.13	+0.3
3,052,665	+		LRK53_RS13845	0.13	-1.5
3,052,666	-		LRK53_RS13845	0.13	+1.2
3,052,666	-		LRK53_RS13845	0.13	-0.6
3,052,666	-		LRK53_RS13845	0.13	+0.8
3,052,666	-		LRK53_RS13845	0.13	+0.6
3,052,666	-		LRK53_RS13845	0.13	+0.6
3,052,875	+		LRK53_RS13845	0.32	-0.4
3,052,875	+		LRK53_RS13845	0.32	-0.5
3,052,876	-		LRK53_RS13845	0.32	+0.4
3,052,876	-		LRK53_RS13845	0.32	-2.4
3,052,884	+		LRK53_RS13845	0.33	-0.8
3,052,887	+		LRK53_RS13845	0.33	+0.8
3,052,887	+		LRK53_RS13845	0.33	-0.4
3,052,888	-		LRK53_RS13845	0.33	-0.2
3,052,888	-		LRK53_RS13845	0.33	+0.5
3,052,888	-		LRK53_RS13845	0.33	-1.5
3,052,888	-		LRK53_RS13845	0.33	+0.2
3,052,888	-		LRK53_RS13845	0.33	-0.4
3,052,888	-		LRK53_RS13845	0.33	+0.4
3,053,035	+		LRK53_RS13845	0.46	+1.2
3,053,035	+		LRK53_RS13845	0.46	-1.4
3,053,035	+		LRK53_RS13845	0.46	-1.5
3,053,035	+		LRK53_RS13845	0.46	-0.9
3,053,035	+		LRK53_RS13845	0.46	-1.8
3,053,035	+		LRK53_RS13845	0.46	-1.6
3,053,035	+		LRK53_RS13845	0.46	-0.6
3,053,036	-		LRK53_RS13845	0.46	+0.8
3,053,036	-		LRK53_RS13845	0.46	-1.8
3,053,036	-		LRK53_RS13845	0.46	+0.6
3,053,067	+		LRK53_RS13845	0.49	+0.0
3,053,067	+		LRK53_RS13845	0.49	+1.0
3,053,067	+		LRK53_RS13845	0.49	+0.2
3,053,067	+		LRK53_RS13845	0.49	+0.4
3,053,067	+		LRK53_RS13845	0.49	-2.9
3,053,067	+		LRK53_RS13845	0.49	+2.2
3,053,067	+		LRK53_RS13845	0.49	-1.1
3,053,067	+		LRK53_RS13845	0.49	-1.8
3,053,067	+		LRK53_RS13845	0.49	-0.4
3,053,068	-		LRK53_RS13845	0.49	+0.4
3,053,068	-		LRK53_RS13845	0.49	-0.9
3,053,068	-		LRK53_RS13845	0.49	-1.2
3,053,069	+		LRK53_RS13845	0.49	-1.5
3,053,069	+		LRK53_RS13845	0.49	-1.5
3,053,070	-		LRK53_RS13845	0.50	-1.9
3,053,094	+		LRK53_RS13845	0.52	+1.2
3,053,094	+		LRK53_RS13845	0.52	-1.5
3,053,094	+		LRK53_RS13845	0.52	-1.4
3,053,094	+		LRK53_RS13845	0.52	-0.2
3,053,094	+		LRK53_RS13845	0.52	+0.4
3,053,094	+		LRK53_RS13845	0.52	-0.2
3,053,094	+		LRK53_RS13845	0.52	+1.0
3,053,094	+		LRK53_RS13845	0.52	+0.2
3,053,094	+		LRK53_RS13845	0.52	-1.4
3,053,094	+		LRK53_RS13845	0.52	-0.8
3,053,094	+		LRK53_RS13845	0.52	+0.0
3,053,094	+		LRK53_RS13845	0.52	-2.1
3,053,094	+		LRK53_RS13845	0.52	-1.2
3,053,094	+		LRK53_RS13845	0.52	+0.2
3,053,094	+		LRK53_RS13845	0.52	-0.3
3,053,095	-		LRK53_RS13845	0.52	-1.0
3,053,095	-		LRK53_RS13845	0.52	+0.0
3,053,095	-		LRK53_RS13845	0.52	-0.2
3,053,095	-		LRK53_RS13845	0.52	-0.1
3,053,095	-		LRK53_RS13845	0.52	+0.4
3,053,095	-		LRK53_RS13845	0.52	+0.2
3,053,095	-		LRK53_RS13845	0.52	-0.8
3,053,095	-		LRK53_RS13845	0.52	-1.6
3,053,095	-		LRK53_RS13845	0.52	-0.8
3,053,095	-		LRK53_RS13845	0.52	-1.0
3,053,095	-		LRK53_RS13845	0.52	+1.2
3,053,095	-		LRK53_RS13845	0.52	-0.6
3,053,095	-		LRK53_RS13845	0.52	-0.5
3,053,095	-		LRK53_RS13845	0.52	+1.8
3,053,133	+		LRK53_RS13845	0.55	+1.6
3,053,133	+		LRK53_RS13845	0.55	+0.5
3,053,133	+		LRK53_RS13845	0.55	+0.4
3,053,133	+		LRK53_RS13845	0.55	-0.2
3,053,134	-		LRK53_RS13845	0.55	+1.2
3,053,134	-		LRK53_RS13845	0.55	-1.3
3,053,134	-		LRK53_RS13845	0.55	-1.0
3,053,170	-		LRK53_RS13845	0.59	-0.6
3,053,373	+		LRK53_RS13845	0.77	-2.1
3,053,373	+		LRK53_RS13845	0.77	+0.9
3,053,373	+		LRK53_RS13845	0.77	+0.1
3,053,373	+		LRK53_RS13845	0.77	-0.6
3,053,373	+		LRK53_RS13845	0.77	+0.1
3,053,373	+		LRK53_RS13845	0.77	+2.5
3,053,373	+		LRK53_RS13845	0.77	-1.2
3,053,373	+		LRK53_RS13845	0.77	+1.7
3,053,373	+		LRK53_RS13845	0.77	-1.2
3,053,373	+		LRK53_RS13845	0.77	+1.8
3,053,373	+		LRK53_RS13845	0.77	-2.1
3,053,373	+		LRK53_RS13845	0.77	-1.0
3,053,373	+		LRK53_RS13845	0.77	-0.4
3,053,373	+		LRK53_RS13845	0.77	-0.7
3,053,373	+		LRK53_RS13845	0.77	-1.6
3,053,373	+		LRK53_RS13845	0.77	-1.4
3,053,373	+		LRK53_RS13845	0.77	-0.9
3,053,374	-		LRK53_RS13845	0.77	-0.2
3,053,374	-		LRK53_RS13845	0.77	-1.2
3,053,374	-		LRK53_RS13845	0.77	+1.8
3,053,374	-		LRK53_RS13845	0.77	+1.2
3,053,374	-		LRK53_RS13845	0.77	+0.6
3,053,374	-		LRK53_RS13845	0.77	-1.8
3,053,374	-		LRK53_RS13845	0.77	-2.3
3,053,374	-		LRK53_RS13845	0.77	+1.2
3,053,374	-		LRK53_RS13845	0.77	-0.7
3,053,374	-		LRK53_RS13845	0.77	-1.9
3,053,374	-		LRK53_RS13845	0.77	-1.2
3,053,374	-		LRK53_RS13845	0.77	-1.3
3,053,374	-		LRK53_RS13845	0.77	-1.6
3,053,374	-		LRK53_RS13845	0.77	-0.6
3,053,374	-		LRK53_RS13845	0.77	-1.3
3,053,374	-		LRK53_RS13845	0.77	-1.3
3,053,374	-		LRK53_RS13845	0.77	-0.7
3,053,374	-		LRK53_RS13845	0.77	-0.4
3,053,374	-		LRK53_RS13845	0.77	-0.1
3,053,374	-		LRK53_RS13845	0.77	+0.0
3,053,374	-		LRK53_RS13845	0.77	-0.2
3,053,374	-		LRK53_RS13845	0.77	-1.7
3,053,523	+				-1.0
3,053,523	+				-1.2
3,053,523	+				-0.0
3,053,523	+				-1.2
3,053,523	+				-1.2
3,053,524	-				-0.2
3,053,524	-				+0.2
3,053,524	-				+0.8
3,053,524	-				-0.6
3,053,524	-				-1.8
3,053,544	+				-0.8
3,053,565	+				-1.2
3,053,565	+				-0.7
3,053,565	+				-0.3
3,053,565	+				-1.1
3,053,565	+				-0.2
3,053,565	+				+2.2
3,053,566	-				+0.2
3,053,566	-				-0.1
3,053,566	-				-1.2
3,053,566	-				-1.2
3,053,566	-				-0.8
3,053,583	+				-0.8
3,053,583	+				-1.1
3,053,583	+				-0.8
3,053,583	+				-0.4
3,053,583	+				+0.4
3,053,583	+				-3.7
3,053,583	+				+0.0
3,053,583	+				+1.2
3,053,583	+				-0.7
3,053,583	+				-0.1
3,053,583	+				-1.8
3,053,583	+				+0.6
3,053,583	+				-0.3
3,053,584	-				-1.4
3,053,584	-				+0.2
3,053,584	-				-0.8
3,053,584	-				-0.8
3,053,584	-				+0.2
3,053,584	-				-0.5
3,053,584	-				-0.4
3,053,584	-				-0.4
3,053,616	+				-2.2
3,053,616	+				-0.8
3,053,616	+				+1.6
3,053,616	+				-1.2
3,053,616	+				+0.9
3,053,616	+				-0.8
3,053,616	+				+0.3
3,053,616	+				+0.3
3,053,616	+				-2.6
3,053,616	+				+1.2
3,053,616	+				+1.2
3,053,616	+				-1.5
3,053,616	+				+0.6
3,053,616	+				-0.4
3,053,617	-				-0.8
3,053,617	-				-1.2
3,053,617	-				+0.6
3,053,617	-				-0.9
3,053,617	-				-0.6
3,053,617	-				-0.5
3,053,617	-				-1.8
3,053,617	-				-0.4
3,053,617	-				-0.9
3,053,617	-				+0.7
3,053,617	-				-1.9
3,053,617	-				-0.7
3,053,617	-				-0.3
3,053,617	-				-0.6
3,053,617	-				-0.8
3,053,617	-				-0.9
3,053,620	-				+0.7
3,053,620	-				-1.6
3,053,716	+				-0.8
3,053,716	+				+0.0
3,053,716	+				-0.2
3,053,716	+				+0.6
3,053,716	+				+1.8
3,053,716	+				-0.7
3,053,716	+				-0.2
3,053,716	+				-1.4
3,053,716	+				+1.4
3,053,716	+				-0.5
3,053,716	+				-1.2
3,053,716	+				+1.5
3,053,717	-				+3.2
3,053,717	-				+2.6
3,053,717	-				-0.2
3,053,717	-				-1.2
3,053,717	-				-0.9
3,053,717	-				+0.0
3,053,717	-				-0.0
3,053,717	-				+1.2
3,053,717	-				-0.6
3,053,717	-				-0.8
3,053,717	-				-0.1
3,053,717	-				-2.8
3,053,717	-				+1.3
3,054,051	+		LRK53_RS13850	0.75	-0.1
3,054,051	+		LRK53_RS13850	0.75	-0.6
3,054,052	-		LRK53_RS13850	0.75	+1.6
3,054,071	+		LRK53_RS13850	0.79	-0.4
3,054,071	+		LRK53_RS13850	0.79	-0.4
3,054,071	+		LRK53_RS13850	0.79	-0.8
3,054,071	+		LRK53_RS13850	0.79	-0.8
3,054,071	+		LRK53_RS13850	0.79	-2.0
3,054,071	+		LRK53_RS13850	0.79	-1.8
3,054,071	+		LRK53_RS13850	0.79	-0.1
3,054,071	+		LRK53_RS13850	0.79	-0.6
3,054,071	+		LRK53_RS13850	0.79	-0.6
3,054,071	+		LRK53_RS13850	0.79	-0.6
3,054,071	+		LRK53_RS13850	0.79	-1.6
3,054,071	+		LRK53_RS13850	0.79	-0.4
3,054,071	+		LRK53_RS13850	0.79	-1.2
3,054,071	+		LRK53_RS13850	0.79	-2.2
3,054,072	-		LRK53_RS13850	0.79	+0.2
3,054,072	-		LRK53_RS13850	0.79	-0.4
3,054,072	-		LRK53_RS13850	0.79	+0.4
3,054,072	-		LRK53_RS13850	0.79	+1.2
3,054,072	-		LRK53_RS13850	0.79	-2.0
3,054,072	-		LRK53_RS13850	0.79	-1.2
3,054,072	-		LRK53_RS13850	0.79	-0.2
3,054,072	-		LRK53_RS13850	0.79	+0.8
3,054,072	-		LRK53_RS13850	0.79	-0.6
3,054,072	-		LRK53_RS13850	0.79	-1.1
3,054,072	-		LRK53_RS13850	0.79	-0.6
3,054,072	-		LRK53_RS13850	0.79	+1.6
3,054,072	-		LRK53_RS13850	0.79	-1.0
3,054,072	-		LRK53_RS13850	0.79	-1.6
3,054,072	-		LRK53_RS13850	0.79	+1.4
3,054,134	+				+2.8
3,054,134	+				+0.2
3,054,134	+				-0.9
3,054,134	+				-1.6
3,054,134	+				+0.6
3,054,135	-				+0.6
3,054,135	-				+0.1
3,054,135	-				-0.6
3,054,135	-				-1.0
3,054,135	-				-1.4
3,054,135	-				-0.8
3,054,135	-				-1.1
3,054,315	-		LRK53_RS13855	0.11	-0.6
3,054,323	-		LRK53_RS13855	0.13	-0.4
3,054,427	+		LRK53_RS13855	0.34	+0.2
3,054,427	+		LRK53_RS13855	0.34	-0.8
3,054,427	+		LRK53_RS13855	0.34	-0.8
3,054,427	+		LRK53_RS13855	0.34	-1.4
3,054,427	+		LRK53_RS13855	0.34	+0.6
3,054,427	+		LRK53_RS13855	0.34	-1.2
3,054,427	+		LRK53_RS13855	0.34	+0.6
3,054,427	+		LRK53_RS13855	0.34	-1.0
3,054,428	-		LRK53_RS13855	0.34	-1.8
3,054,428	-		LRK53_RS13855	0.34	-1.6
3,054,428	-		LRK53_RS13855	0.34	+0.6
3,054,428	-		LRK53_RS13855	0.34	-0.2
3,054,490	+		LRK53_RS13855	0.47	+1.8
3,054,490	+		LRK53_RS13855	0.47	-0.8
3,054,491	-		LRK53_RS13855	0.47	-1.2
3,054,491	-		LRK53_RS13855	0.47	-0.8
3,054,491	-		LRK53_RS13855	0.47	+0.5
3,054,491	-		LRK53_RS13855	0.47	-1.4