Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS13545

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
2,986,877	-				-2.8
2,986,877	-				-2.4
2,986,877	-				-0.8
2,986,897	+				-2.0
2,986,897	+				-1.7
2,986,897	+				+2.2
2,986,897	+				+1.2
2,986,897	+				-1.8
2,986,897	+				-0.8
2,986,897	+				-1.7
2,986,897	+				+2.2
2,986,897	+				+0.4
2,986,897	+				-0.4
2,986,897	+				+0.9
2,986,897	+				-0.2
2,986,898	-				-0.6
2,986,898	-				-1.0
2,986,898	-				-0.0
2,986,898	-				+1.2
2,986,898	-				-0.3
2,986,898	-				+0.6
2,986,898	-				-1.0
2,986,898	-				-0.8
2,986,898	-				+0.2
2,986,898	-				-1.3
2,986,924	+				-2.2
2,986,924	+				+0.3
2,986,924	+				-2.8
2,986,924	+				-1.7
2,986,925	-				-0.8
2,986,925	-				-0.4
2,986,939	+				-0.8
2,986,940	-				+0.7
2,986,940	-				-0.4
2,986,940	-				-1.2
2,986,940	-				+1.9
2,987,265	+		LRK53_RS13540	0.55	-0.8
2,987,265	+		LRK53_RS13540	0.55	-1.7
2,987,307	+		LRK53_RS13540	0.62	-1.7
2,987,307	+		LRK53_RS13540	0.62	-1.0
2,987,308	-		LRK53_RS13540	0.62	+2.7
2,987,308	-		LRK53_RS13540	0.62	-2.0
2,987,381	+		LRK53_RS13540	0.73	+1.2
2,987,382	-		LRK53_RS13540	0.73	-1.3
2,987,382	-		LRK53_RS13540	0.73	-1.2
2,987,412	+		LRK53_RS13540	0.77	+1.3
2,987,413	-		LRK53_RS13540	0.77	+2.2
2,987,413	-		LRK53_RS13540	0.77	-0.5
2,987,562	+				+2.7
2,987,562	+				-1.3
2,987,562	+				-0.8
2,987,563	-				-1.4
2,987,563	-				-0.9
2,987,563	-				+0.5
2,987,563	-				+2.5
2,987,563	-				-1.0
2,987,600	+				-1.8
2,987,600	+				-1.4
2,987,600	+				+2.4
2,987,600	+				-1.4
2,987,600	+				-1.7
2,987,600	+				+0.7
2,987,600	+				+0.2
2,987,600	+				-0.4
2,987,600	+				-1.4
2,987,600	+				-1.7
2,987,601	-				+1.2
2,987,601	-				+0.2
2,987,601	-				-0.3
2,987,601	-				+1.2
2,987,601	-				-0.8
2,987,601	-				+0.2
2,987,601	-				+2.2
2,987,601	-				-1.7
2,987,601	-				-0.8
2,987,601	-				+0.2
2,987,601	-				-0.1
2,987,601	-				+0.6
2,987,601	-				-0.7
2,987,601	-				+1.2
2,987,601	-				-0.1
2,987,657	+				+0.2
2,987,657	+				-1.0
2,987,657	+				-1.4
2,987,657	+				+1.2
2,987,657	+				+0.2
2,987,658	-				-1.2
2,987,658	-				-1.2
2,987,808	+		LRK53_RS13545	0.21	+0.2
2,987,808	+		LRK53_RS13545	0.21	-0.5
2,987,808	+		LRK53_RS13545	0.21	+0.6
2,987,808	+		LRK53_RS13545	0.21	-1.4
2,987,808	+		LRK53_RS13545	0.21	-0.7
2,987,808	+		LRK53_RS13545	0.21	-0.1
2,987,808	+		LRK53_RS13545	0.21	+0.9
2,987,808	+		LRK53_RS13545	0.21	-0.4
2,987,808	+		LRK53_RS13545	0.21	-0.7
2,987,808	+		LRK53_RS13545	0.21	-0.6
2,987,808	+		LRK53_RS13545	0.21	-0.4
2,987,808	+		LRK53_RS13545	0.21	-0.2
2,987,808	+		LRK53_RS13545	0.21	+0.6
2,987,808	+		LRK53_RS13545	0.21	-0.7
2,987,808	+		LRK53_RS13545	0.21	-1.7
2,987,808	+		LRK53_RS13545	0.21	-1.8
2,987,808	+		LRK53_RS13545	0.21	-1.7
2,987,808	+		LRK53_RS13545	0.21	-0.7
2,987,809	-		LRK53_RS13545	0.22	-0.8
2,987,809	-		LRK53_RS13545	0.22	+1.2
2,987,809	-		LRK53_RS13545	0.22	-2.2
2,987,809	-		LRK53_RS13545	0.22	-1.1
2,987,809	-		LRK53_RS13545	0.22	-1.8
2,987,809	-		LRK53_RS13545	0.22	-1.2
2,987,809	-		LRK53_RS13545	0.22	-2.7
2,987,809	-		LRK53_RS13545	0.22	-0.4
2,987,809	-		LRK53_RS13545	0.22	-0.8
2,987,809	-		LRK53_RS13545	0.22	-0.8
2,987,809	-		LRK53_RS13545	0.22	+1.2
2,987,809	-		LRK53_RS13545	0.22	+0.2
2,987,809	-		LRK53_RS13545	0.22	-2.0
2,987,809	-		LRK53_RS13545	0.22	+0.6
2,987,814	+		LRK53_RS13545	0.23	-0.7
2,987,814	+		LRK53_RS13545	0.23	-0.9
2,987,814	+		LRK53_RS13545	0.23	-2.2
2,987,814	+		LRK53_RS13545	0.23	-0.1
2,987,814	+		LRK53_RS13545	0.23	+0.7
2,987,814	+		LRK53_RS13545	0.23	-3.1
2,987,815	-		LRK53_RS13545	0.23	-0.5
2,987,815	-		LRK53_RS13545	0.23	-1.0
2,987,815	-		LRK53_RS13545	0.23	-0.9
2,987,977	+		LRK53_RS13545	0.58	-1.4
2,988,036	+		LRK53_RS13545	0.71	-0.3
2,988,036	+		LRK53_RS13545	0.71	+0.2
2,988,036	+		LRK53_RS13545	0.71	+0.2
2,988,037	-		LRK53_RS13545	0.71	+0.4
2,988,256	+				+0.2
2,988,256	+				-1.7
2,988,256	+				-0.3
2,988,256	+				+3.2
2,988,256	+				+0.3
2,988,256	+				-1.2
2,988,256	+				+1.8
2,988,256	+				-0.8
2,988,256	+				-0.4
2,988,256	+				-0.8
2,988,256	+				-0.2
2,988,256	+				+0.3
2,988,256	+				+1.6
2,988,256	+				-0.4
2,988,257	-				-1.4
2,988,257	-				-1.1
2,988,257	-				+0.2
2,988,257	-				+1.2
2,988,257	-				+0.3
2,988,257	-				+1.2
2,988,257	-				-0.6
2,988,257	-				+0.7
2,988,257	-				-1.3
2,988,257	-				-0.2
2,988,257	-				+0.2
2,988,523	+		LRK53_RS13550	0.21	+0.2
2,988,523	+		LRK53_RS13550	0.21	-0.0
2,988,523	+		LRK53_RS13550	0.21	+1.2
2,988,523	+		LRK53_RS13550	0.21	+1.9
2,988,523	+		LRK53_RS13550	0.21	-1.2
2,988,524	-		LRK53_RS13550	0.21	-0.2
2,988,524	-		LRK53_RS13550	0.21	-0.8
2,988,524	-		LRK53_RS13550	0.21	+0.4
2,988,524	-		LRK53_RS13550	0.21	-0.8
2,988,524	-		LRK53_RS13550	0.21	+0.7
2,988,692	-		LRK53_RS13550	0.33	-0.1
2,988,692	-		LRK53_RS13550	0.33	+0.5
2,988,730	+		LRK53_RS13550	0.36	-0.4
2,988,730	+		LRK53_RS13550	0.36	-0.8
2,988,730	+		LRK53_RS13550	0.36	-1.0
2,988,731	-		LRK53_RS13550	0.36	+0.2
2,988,731	-		LRK53_RS13550	0.36	-0.8
2,988,731	-		LRK53_RS13550	0.36	+1.2
2,988,731	-		LRK53_RS13550	0.36	-0.8
2,988,731	-		LRK53_RS13550	0.36	+1.4
2,988,814	+		LRK53_RS13550	0.42	-0.4
2,988,814	+		LRK53_RS13550	0.42	+1.2
2,988,847	+		LRK53_RS13550	0.44	+2.2
2,988,865	+		LRK53_RS13550	0.46	-0.3
2,988,865	+		LRK53_RS13550	0.46	-0.4
2,988,865	+		LRK53_RS13550	0.46	-0.8
2,988,865	+		LRK53_RS13550	0.46	-0.6
2,988,865	+		LRK53_RS13550	0.46	-1.3
2,988,865	+		LRK53_RS13550	0.46	-0.9
2,988,865	+		LRK53_RS13550	0.46	-0.8
2,988,865	+		LRK53_RS13550	0.46	-1.7
2,988,866	-		LRK53_RS13550	0.46	+1.7
2,988,866	-		LRK53_RS13550	0.46	+2.2
2,988,866	-		LRK53_RS13550	0.46	+0.2
2,988,866	-		LRK53_RS13550	0.46	+0.4
2,988,866	-		LRK53_RS13550	0.46	+0.2
2,988,866	-		LRK53_RS13550	0.46	+1.2
2,988,866	-		LRK53_RS13550	0.46	+1.2
2,988,866	-		LRK53_RS13550	0.46	-1.0