Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS13275

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
2,923,384	-				+0.2
2,923,390	+				-1.0
2,923,395	-				+1.2
2,923,405	+				+0.2
2,923,410	+				+0.2
2,923,421	+				-1.1
2,923,421	+				-1.9
2,923,421	+				-2.1
2,923,421	+				-0.4
2,923,422	-				-0.1
2,923,618	+				+0.6
2,923,618	+				-3.9
2,923,618	+				+0.1
2,923,618	+				-1.0
2,923,653	+				-1.0
2,923,654	-				+0.3
2,923,654	-				+0.6
2,923,677	+				-2.0
2,923,677	+				-2.0
2,923,677	+				+1.2
2,923,678	-				+0.0
2,923,678	-				-0.6
2,923,678	-				-0.5
2,923,678	-				+0.4
2,923,702	-				-2.3
2,923,702	-				-1.3
2,923,752	+		LRK53_RS13270	0.12	-0.2
2,923,752	+		LRK53_RS13270	0.12	-1.1
2,923,752	+		LRK53_RS13270	0.12	-1.2
2,923,752	+		LRK53_RS13270	0.12	-0.6
2,923,753	-		LRK53_RS13270	0.12	-0.4
2,923,753	-		LRK53_RS13270	0.12	-1.5
2,923,825	+		LRK53_RS13270	0.22	+1.9
2,923,825	+		LRK53_RS13270	0.22	-0.1
2,923,825	+		LRK53_RS13270	0.22	-2.0
2,923,826	-		LRK53_RS13270	0.23	-0.7
2,923,826	-		LRK53_RS13270	0.23	-0.4
2,923,826	-		LRK53_RS13270	0.23	-0.6
2,923,826	-		LRK53_RS13270	0.23	-3.3
2,923,826	-		LRK53_RS13270	0.23	+0.2
2,923,852	+		LRK53_RS13270	0.26	-1.5
2,923,852	+		LRK53_RS13270	0.26	-1.7
2,923,852	+		LRK53_RS13270	0.26	+0.0
2,923,852	+		LRK53_RS13270	0.26	-0.6
2,923,853	-		LRK53_RS13270	0.26	+1.4
2,923,853	-		LRK53_RS13270	0.26	-0.5
2,923,853	-		LRK53_RS13270	0.26	-0.7
2,923,883	+		LRK53_RS13270	0.31	-0.3
2,923,883	+		LRK53_RS13270	0.31	-0.4
2,923,891	+		LRK53_RS13270	0.32	+0.9
2,923,891	+		LRK53_RS13270	0.32	-0.0
2,924,094	-		LRK53_RS13270	0.62	-0.1
2,924,129	-		LRK53_RS13270	0.67	-0.7
2,924,157	+		LRK53_RS13270	0.71	+0.6
2,924,157	+		LRK53_RS13270	0.71	+0.4
2,924,157	+		LRK53_RS13270	0.71	-0.9
2,924,157	+		LRK53_RS13270	0.71	-1.6
2,924,157	+		LRK53_RS13270	0.71	-0.9
2,924,157	+		LRK53_RS13270	0.71	+0.3
2,924,157	+		LRK53_RS13270	0.71	-0.5
2,924,157	+		LRK53_RS13270	0.71	-1.0
2,924,157	+		LRK53_RS13270	0.71	-1.3
2,924,157	+		LRK53_RS13270	0.71	-1.1
2,924,157	+		LRK53_RS13270	0.71	-2.1
2,924,157	+		LRK53_RS13270	0.71	-1.4
2,924,157	+		LRK53_RS13270	0.71	-0.5
2,924,157	+		LRK53_RS13270	0.71	-1.0
2,924,158	-		LRK53_RS13270	0.71	-0.1
2,924,158	-		LRK53_RS13270	0.71	+0.2
2,924,158	-		LRK53_RS13270	0.71	+2.8
2,924,158	-		LRK53_RS13270	0.71	-0.8
2,924,158	-		LRK53_RS13270	0.71	-1.8
2,924,158	-		LRK53_RS13270	0.71	+1.5
2,924,158	-		LRK53_RS13270	0.71	-1.1
2,924,158	-		LRK53_RS13270	0.71	-1.5
2,924,158	-		LRK53_RS13270	0.71	+0.7
2,924,158	-		LRK53_RS13270	0.71	+0.4
2,924,158	-		LRK53_RS13270	0.71	+0.1
2,924,158	-		LRK53_RS13270	0.71	+1.2
2,924,158	-		LRK53_RS13270	0.71	-0.3
2,924,158	-		LRK53_RS13270	0.71	-0.7
2,924,161	+		LRK53_RS13270	0.71	+0.1
2,924,161	+		LRK53_RS13270	0.71	+1.2
2,924,161	+		LRK53_RS13270	0.71	-0.5
2,924,161	+		LRK53_RS13270	0.71	+0.2
2,924,161	+		LRK53_RS13270	0.71	+0.2
2,924,161	+		LRK53_RS13270	0.71	+0.2
2,924,161	+		LRK53_RS13270	0.71	-0.1
2,924,161	+		LRK53_RS13270	0.71	+0.8
2,924,161	+		LRK53_RS13270	0.71	+1.5
2,924,161	+		LRK53_RS13270	0.71	+1.2
2,924,161	+		LRK53_RS13270	0.71	+0.0
2,924,161	+		LRK53_RS13270	0.71	+1.2
2,924,161	+		LRK53_RS13270	0.71	-0.0
2,924,161	+		LRK53_RS13270	0.71	-1.0
2,924,161	+		LRK53_RS13270	0.71	+0.6
2,924,161	+		LRK53_RS13270	0.71	-0.6
2,924,161	+		LRK53_RS13270	0.71	+2.5
2,924,161	+		LRK53_RS13270	0.71	-0.4
2,924,162	-		LRK53_RS13270	0.71	+0.9
2,924,162	-		LRK53_RS13270	0.71	+1.2
2,924,162	-		LRK53_RS13270	0.71	+0.2
2,924,162	-		LRK53_RS13270	0.71	-0.1
2,924,162	-		LRK53_RS13270	0.71	-1.0
2,924,162	-		LRK53_RS13270	0.71	+0.2
2,924,162	-		LRK53_RS13270	0.71	+1.2
2,924,162	-		LRK53_RS13270	0.71	-0.4
2,924,162	-		LRK53_RS13270	0.71	+0.2
2,924,162	-		LRK53_RS13270	0.71	+0.3
2,924,162	-		LRK53_RS13270	0.71	+0.2
2,924,162	-		LRK53_RS13270	0.71	-2.1
2,924,162	-		LRK53_RS13270	0.71	-0.8
2,924,162	-		LRK53_RS13270	0.71	-2.3
2,924,162	-		LRK53_RS13270	0.71	+0.0
2,924,162	-		LRK53_RS13270	0.71	+0.6
2,924,162	-		LRK53_RS13270	0.71	-0.2
2,924,162	-		LRK53_RS13270	0.71	-0.5
2,924,162	-		LRK53_RS13270	0.71	-1.2
2,924,162	-		LRK53_RS13270	0.71	-0.6
2,924,165	+		LRK53_RS13270	0.72	-1.5
2,924,165	+		LRK53_RS13270	0.72	-0.3
2,924,165	+		LRK53_RS13270	0.72	+1.8
2,924,166	-		LRK53_RS13270	0.72	-2.4
2,924,166	-		LRK53_RS13270	0.72	-1.0
2,924,166	-		LRK53_RS13270	0.72	-0.1
2,924,237	+		LRK53_RS13270	0.82	-0.6
2,924,238	-		LRK53_RS13270	0.83	-2.0
2,924,238	-		LRK53_RS13270	0.83	-1.4
2,924,334	+				+0.4
2,924,334	+				-0.7
2,924,334	+				-0.4
2,924,334	+				+0.2
2,924,334	+				-0.3
2,924,334	+				-1.1
2,924,334	+				-1.6
2,924,334	+				-0.9
2,924,334	+				-0.5
2,924,334	+				+0.7
2,924,334	+				+1.4
2,924,334	+				+1.2
2,924,334	+				-1.5
2,924,334	+				+1.2
2,924,334	+				+0.4
2,924,334	+				-1.8
2,924,334	+				+1.8
2,924,334	+				-1.6
2,924,334	+				-0.8
2,924,334	+				-0.8
2,924,334	+				+0.8
2,924,334	+				+0.9
2,924,334	+				+1.2
2,924,334	+				-1.4
2,924,334	+				-0.8
2,924,334	+				-0.1
2,924,335	-				-0.3
2,924,335	-				+0.9
2,924,335	-				-0.4
2,924,335	-				+0.4
2,924,335	-				-2.7
2,924,335	-				+1.0
2,924,335	-				+2.8
2,924,335	-				-0.8
2,924,335	-				-0.4
2,924,335	-				+1.2
2,924,335	-				+0.2
2,924,335	-				-0.8
2,924,335	-				+0.2
2,924,335	-				-0.8
2,924,335	-				-0.6
2,924,335	-				+0.1
2,924,335	-				+0.5
2,924,335	-				+0.2
2,924,342	+				-1.4
2,924,342	+				-0.6
2,924,342	+				-0.4
2,924,343	-				-0.8
2,924,343	-				+0.5
2,924,343	-				+0.0
2,924,370	-				-1.6
2,924,411	+				+1.8
2,924,411	+				-0.1
2,924,411	+				-0.0
2,924,411	+				-0.4
2,924,411	+				+0.5
2,924,411	+				-0.5
2,924,411	+				+1.0
2,924,411	+				+0.3
2,924,411	+				-0.5
2,924,411	+				+0.6
2,924,412	-				-1.1
2,924,536	+		LRK53_RS13275	0.10	-0.3
2,924,536	+		LRK53_RS13275	0.10	-1.0
2,924,537	-		LRK53_RS13275	0.10	-0.8
2,924,537	-		LRK53_RS13275	0.10	-0.8
2,924,537	-		LRK53_RS13275	0.10	-2.0
2,924,645	+		LRK53_RS13275	0.16	-0.5
2,924,645	+		LRK53_RS13275	0.16	-0.2
2,924,645	+		LRK53_RS13275	0.16	+1.2
2,924,645	+		LRK53_RS13275	0.16	-1.1
2,924,645	+		LRK53_RS13275	0.16	+0.7
2,924,645	+		LRK53_RS13275	0.16	-1.8
2,924,645	+		LRK53_RS13275	0.16	+2.2
2,924,646	-		LRK53_RS13275	0.17	-2.3
2,924,646	-		LRK53_RS13275	0.17	-1.7
2,924,646	-		LRK53_RS13275	0.17	-0.8
2,924,646	-		LRK53_RS13275	0.17	+0.8
2,924,646	-		LRK53_RS13275	0.17	+1.8
2,924,646	-		LRK53_RS13275	0.17	-0.4
2,924,646	-		LRK53_RS13275	0.17	-0.7
2,924,646	-		LRK53_RS13275	0.17	-0.4
2,924,646	-		LRK53_RS13275	0.17	-0.4
2,924,646	-		LRK53_RS13275	0.17	-1.0
2,924,646	-		LRK53_RS13275	0.17	+0.2
2,924,675	-		LRK53_RS13275	0.18	-1.1
2,924,694	+		LRK53_RS13275	0.19	-1.2
2,924,726	+		LRK53_RS13275	0.21	+0.1
2,924,726	+		LRK53_RS13275	0.21	+0.0
2,924,755	+		LRK53_RS13275	0.23	-1.4
2,924,755	+		LRK53_RS13275	0.23	-2.1
2,924,755	+		LRK53_RS13275	0.23	-2.0
2,924,755	+		LRK53_RS13275	0.23	-1.2
2,924,755	+		LRK53_RS13275	0.23	-0.4
2,924,755	+		LRK53_RS13275	0.23	-0.5
2,924,755	+		LRK53_RS13275	0.23	+2.2
2,924,805	+		LRK53_RS13275	0.26	-0.8
2,924,805	+		LRK53_RS13275	0.26	+0.7
2,924,805	+		LRK53_RS13275	0.26	+0.6
2,924,805	+		LRK53_RS13275	0.26	-1.4
2,924,805	+		LRK53_RS13275	0.26	-1.7
2,924,805	+		LRK53_RS13275	0.26	-1.0
2,924,806	-		LRK53_RS13275	0.26	-2.7
2,924,861	-		LRK53_RS13275	0.29	-0.4
2,924,909	+		LRK53_RS13275	0.32	-0.5
2,924,909	+		LRK53_RS13275	0.32	+0.8
2,924,909	+		LRK53_RS13275	0.32	-0.8
2,924,909	+		LRK53_RS13275	0.32	-0.8
2,924,910	-		LRK53_RS13275	0.32	+2.8
2,924,910	-		LRK53_RS13275	0.32	+1.2
2,925,058	+		LRK53_RS13275	0.40	-1.7
2,925,058	+		LRK53_RS13275	0.40	-1.1
2,925,058	+		LRK53_RS13275	0.40	+1.2
2,925,058	+		LRK53_RS13275	0.40	+1.3
2,925,059	-		LRK53_RS13275	0.40	-0.7
2,925,059	-		LRK53_RS13275	0.40	-0.4
2,925,185	+		LRK53_RS13275	0.47	-0.6
2,925,185	+		LRK53_RS13275	0.47	-0.9
2,925,185	+		LRK53_RS13275	0.47	+0.3
2,925,185	+		LRK53_RS13275	0.47	-0.0
2,925,185	+		LRK53_RS13275	0.47	-0.6
2,925,185	+		LRK53_RS13275	0.47	-1.5
2,925,185	+		LRK53_RS13275	0.47	-0.9
2,925,185	+		LRK53_RS13275	0.47	-2.6
2,925,185	+		LRK53_RS13275	0.47	-1.2
2,925,185	+		LRK53_RS13275	0.47	+2.2
2,925,185	+		LRK53_RS13275	0.47	-0.1
2,925,186	-		LRK53_RS13275	0.47	-1.1
2,925,186	-		LRK53_RS13275	0.47	+1.4
2,925,186	-		LRK53_RS13275	0.47	-0.6
2,925,186	-		LRK53_RS13275	0.47	-1.2
2,925,306	+		LRK53_RS13275	0.54	-0.5
2,925,306	+		LRK53_RS13275	0.54	-0.8
2,925,306	+		LRK53_RS13275	0.54	-0.3
2,925,306	+		LRK53_RS13275	0.54	-0.3
2,925,306	+		LRK53_RS13275	0.54	-0.8
2,925,306	+		LRK53_RS13275	0.54	+0.2
2,925,307	-		LRK53_RS13275	0.54	-0.6
2,925,307	-		LRK53_RS13275	0.54	+0.2
2,925,307	-		LRK53_RS13275	0.54	-0.9
2,925,307	-		LRK53_RS13275	0.54	+0.2
2,925,307	-		LRK53_RS13275	0.54	-1.8
2,925,307	-		LRK53_RS13275	0.54	-0.4
2,925,307	-		LRK53_RS13275	0.54	-0.1
2,925,307	-		LRK53_RS13275	0.54	+0.2
2,925,307	-		LRK53_RS13275	0.54	-1.8
2,925,307	-		LRK53_RS13275	0.54	-0.6
2,925,307	-		LRK53_RS13275	0.54	-0.6
2,925,307	-		LRK53_RS13275	0.54	+0.6
2,925,401	+		LRK53_RS13275	0.60	-0.4
2,925,402	-		LRK53_RS13275	0.60	+0.0
2,925,480	+		LRK53_RS13275	0.64	-1.0
2,925,480	+		LRK53_RS13275	0.64	-0.2
2,925,480	+		LRK53_RS13275	0.64	+0.2
2,925,480	+		LRK53_RS13275	0.64	+3.2
2,925,481	-		LRK53_RS13275	0.64	-0.8
2,925,693	+		LRK53_RS13275	0.76	-0.5
2,925,693	+		LRK53_RS13275	0.76	-0.7
2,925,693	+		LRK53_RS13275	0.76	-3.0
2,925,694	-		LRK53_RS13275	0.76	+0.2
2,925,694	-		LRK53_RS13275	0.76	-0.8
2,925,694	-		LRK53_RS13275	0.76	-1.0
2,925,694	-		LRK53_RS13275	0.76	-0.2
2,925,745	-		LRK53_RS13275	0.79	-0.0
2,925,887	+		LRK53_RS13275	0.87	+1.2
2,925,887	+		LRK53_RS13275	0.87	-2.4
2,925,887	+		LRK53_RS13275	0.87	-0.0
2,925,887	+		LRK53_RS13275	0.87	-0.8
2,925,887	+		LRK53_RS13275	0.87	+0.2
2,925,888	-		LRK53_RS13275	0.88	+2.8
2,925,911	+		LRK53_RS13275	0.89	-1.0
2,925,911	+		LRK53_RS13275	0.89	+1.2
2,925,911	+		LRK53_RS13275	0.89	+0.6
2,925,911	+		LRK53_RS13275	0.89	+0.4
2,925,911	+		LRK53_RS13275	0.89	-0.6
2,925,911	+		LRK53_RS13275	0.89	-0.9
2,925,911	+		LRK53_RS13275	0.89	+0.6
2,925,912	-		LRK53_RS13275	0.89	+1.6
2,925,912	-		LRK53_RS13275	0.89	+0.2
2,925,912	-		LRK53_RS13275	0.89	-1.4
2,925,912	-		LRK53_RS13275	0.89	-1.4
2,925,912	-		LRK53_RS13275	0.89	-0.1
2,925,912	-		LRK53_RS13275	0.89	-0.6
2,925,912	-		LRK53_RS13275	0.89	-0.2
2,926,056	+				-1.4
2,926,056	+				-1.4
2,926,056	+				-2.0
2,926,056	+				-0.0
2,926,056	+				-2.0
2,926,056	+				-1.7
2,926,056	+				-0.6
2,926,056	+				-0.1
2,926,056	+				-0.6
2,926,057	-				+0.2
2,926,057	-				+1.2
2,926,057	-				+0.1
2,926,057	-				-0.6
2,926,057	-				-1.2
2,926,057	-				-2.4
2,926,057	-				-1.0
2,926,057	-				-1.4
2,926,057	-				+1.0
2,926,057	-				-2.7
2,926,057	-				-1.5
2,926,060	+				-2.4
2,926,060	+				+2.2
2,926,060	+				+0.1
2,926,060	+				-0.8
2,926,060	+				-1.1
2,926,060	+				-0.6
2,926,060	+				-1.6
2,926,060	+				-1.1
2,926,060	+				-1.6
2,926,060	+				-0.4
2,926,060	+				-0.0
2,926,060	+				+0.4
2,926,060	+				-1.7
2,926,060	+				+0.4
2,926,061	-				-0.9
2,926,061	-				-0.4
2,926,061	-				-0.1
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