Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS13140

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
2,895,593	+				-0.3
2,895,653	+				+0.8
2,895,783	-				-1.7
2,895,803	+				+1.3
2,895,803	+				+1.0
2,895,803	+				-1.1
2,895,803	+				+0.3
2,895,804	-				+0.4
2,895,830	+				-0.3
2,895,830	+				+0.3
2,895,830	+				+1.3
2,895,830	+				-0.3
2,895,831	-				+0.4
2,895,831	-				-0.2
2,895,831	-				+0.6
2,895,831	-				+0.6
2,895,831	-				-0.3
2,895,980	+		LRK53_RS13135	0.32	-2.4
2,895,980	+		LRK53_RS13135	0.32	-1.0
2,895,980	+		LRK53_RS13135	0.32	-1.0
2,895,980	+		LRK53_RS13135	0.32	-0.3
2,895,996	-		LRK53_RS13135	0.35	-0.5
2,896,076	+		LRK53_RS13135	0.47	+0.3
2,896,076	+		LRK53_RS13135	0.47	-1.9
2,896,076	+		LRK53_RS13135	0.47	-0.8
2,896,076	+		LRK53_RS13135	0.47	-0.5
2,896,076	+		LRK53_RS13135	0.47	+0.8
2,896,076	+		LRK53_RS13135	0.47	+1.5
2,896,076	+		LRK53_RS13135	0.47	-0.3
2,896,076	+		LRK53_RS13135	0.47	-0.7
2,896,076	+		LRK53_RS13135	0.47	+0.3
2,896,076	+		LRK53_RS13135	0.47	-1.0
2,896,076	+		LRK53_RS13135	0.47	-0.7
2,896,076	+		LRK53_RS13135	0.47	+0.2
2,896,076	+		LRK53_RS13135	0.47	+0.7
2,896,077	-		LRK53_RS13135	0.47	-1.1
2,896,077	-		LRK53_RS13135	0.47	+0.7
2,896,077	-		LRK53_RS13135	0.47	+0.6
2,896,077	-		LRK53_RS13135	0.47	-0.1
2,896,077	-		LRK53_RS13135	0.47	+0.7
2,896,077	-		LRK53_RS13135	0.47	-1.1
2,896,077	-		LRK53_RS13135	0.47	-2.7
2,896,077	-		LRK53_RS13135	0.47	-0.4
2,896,077	-		LRK53_RS13135	0.47	-0.0
2,896,077	-		LRK53_RS13135	0.47	-1.0
2,896,142	+		LRK53_RS13135	0.57	+0.7
2,896,182	-		LRK53_RS13135	0.63	-0.7
2,896,203	+		LRK53_RS13135	0.66	+1.5
2,896,203	+		LRK53_RS13135	0.66	-0.1
2,896,204	-		LRK53_RS13135	0.66	-0.8
2,896,204	-		LRK53_RS13135	0.66	+2.9
2,896,274	+		LRK53_RS13135	0.77	+1.0
2,896,274	+		LRK53_RS13135	0.77	+0.6
2,896,275	-		LRK53_RS13135	0.77	+0.7
2,896,275	-		LRK53_RS13135	0.77	-0.7
2,896,275	-		LRK53_RS13135	0.77	-0.1
2,896,386	-				-1.5
2,896,394	+				+0.3
2,896,395	-				-0.1
2,896,476	-				+0.4
2,896,476	-				-0.5
2,896,545	-				+0.5
2,896,641	+				-0.3
2,896,641	+				-0.1
2,896,642	-				+2.3
2,896,782	+		LRK53_RS13140	0.14	-1.8
2,896,782	+		LRK53_RS13140	0.14	+0.3
2,896,782	+		LRK53_RS13140	0.14	-2.0
2,896,782	+		LRK53_RS13140	0.14	-1.8
2,896,782	+		LRK53_RS13140	0.14	-0.2
2,896,782	+		LRK53_RS13140	0.14	-1.6
2,896,782	+		LRK53_RS13140	0.14	+0.4
2,896,782	+		LRK53_RS13140	0.14	-1.9
2,896,782	+		LRK53_RS13140	0.14	+1.3
2,896,782	+		LRK53_RS13140	0.14	+0.2
2,896,782	+		LRK53_RS13140	0.14	-0.3
2,896,782	+		LRK53_RS13140	0.14	-1.7
2,896,782	+		LRK53_RS13140	0.14	+0.3
2,896,782	+		LRK53_RS13140	0.14	-0.8
2,896,783	-		LRK53_RS13140	0.14	-1.9
2,896,783	-		LRK53_RS13140	0.14	-0.3
2,896,783	-		LRK53_RS13140	0.14	+0.1
2,896,783	-		LRK53_RS13140	0.14	-0.0
2,896,783	-		LRK53_RS13140	0.14	-0.5
2,896,783	-		LRK53_RS13140	0.14	-1.3
2,896,783	-		LRK53_RS13140	0.14	-1.3
2,896,783	-		LRK53_RS13140	0.14	-0.3
2,896,783	-		LRK53_RS13140	0.14	-1.9
2,896,783	-		LRK53_RS13140	0.14	-2.2
2,896,830	+		LRK53_RS13140	0.17	-1.9
2,896,831	-		LRK53_RS13140	0.17	+2.3
2,896,868	+		LRK53_RS13140	0.20	-0.3
2,896,868	+		LRK53_RS13140	0.20	-1.3
2,896,869	-		LRK53_RS13140	0.20	-0.9
2,896,923	+		LRK53_RS13140	0.24	-0.7
2,896,923	+		LRK53_RS13140	0.24	-1.1
2,896,923	+		LRK53_RS13140	0.24	-1.0
2,896,923	+		LRK53_RS13140	0.24	+0.6
2,896,923	+		LRK53_RS13140	0.24	-0.7
2,896,923	+		LRK53_RS13140	0.24	-1.2
2,896,923	+		LRK53_RS13140	0.24	-0.3
2,896,924	-		LRK53_RS13140	0.24	+1.3
2,896,924	-		LRK53_RS13140	0.24	-1.3
2,896,924	-		LRK53_RS13140	0.24	-0.9
2,896,924	-		LRK53_RS13140	0.24	-0.7
2,896,924	-		LRK53_RS13140	0.24	-0.2
2,896,924	-		LRK53_RS13140	0.24	-1.0
2,896,924	-		LRK53_RS13140	0.24	-0.7
2,896,924	-		LRK53_RS13140	0.24	+0.5
2,896,924	-		LRK53_RS13140	0.24	+0.3
2,896,924	-		LRK53_RS13140	0.24	-1.3
2,896,924	-		LRK53_RS13140	0.24	-3.4
2,896,924	-		LRK53_RS13140	0.24	-0.8
2,896,924	-		LRK53_RS13140	0.24	-2.7
2,897,043	+		LRK53_RS13140	0.32	+0.3
2,897,043	+		LRK53_RS13140	0.32	-1.6
2,897,044	-		LRK53_RS13140	0.33	-1.4
2,897,044	-		LRK53_RS13140	0.33	-0.4
2,897,044	-		LRK53_RS13140	0.33	-1.9
2,897,044	-		LRK53_RS13140	0.33	-1.5
2,897,044	-		LRK53_RS13140	0.33	-1.0
2,897,044	-		LRK53_RS13140	0.33	-2.0
2,897,232	+		LRK53_RS13140	0.46	+0.3
2,897,232	+		LRK53_RS13140	0.46	+0.4
2,897,232	+		LRK53_RS13140	0.46	+1.2
2,897,233	-		LRK53_RS13140	0.46	+0.2
2,897,233	-		LRK53_RS13140	0.46	+0.3
2,897,233	-		LRK53_RS13140	0.46	-1.1
2,897,233	-		LRK53_RS13140	0.46	+0.7
2,897,233	-		LRK53_RS13140	0.46	+2.3
2,897,233	-		LRK53_RS13140	0.46	-1.2
2,897,637	+		LRK53_RS13140	0.75	+1.3
2,897,638	-		LRK53_RS13140	0.75	-1.2
2,897,691	+		LRK53_RS13140	0.79	-1.9
2,897,691	+		LRK53_RS13140	0.79	-0.7
2,897,691	+		LRK53_RS13140	0.79	-2.5
2,897,691	+		LRK53_RS13140	0.79	-1.6
2,897,691	+		LRK53_RS13140	0.79	+0.3
2,897,691	+		LRK53_RS13140	0.79	+0.1
2,897,691	+		LRK53_RS13140	0.79	-2.5
2,897,692	-		LRK53_RS13140	0.79	-0.9
2,897,692	-		LRK53_RS13140	0.79	-1.7
2,897,692	-		LRK53_RS13140	0.79	-1.5
2,897,692	-		LRK53_RS13140	0.79	-1.5
2,897,692	-		LRK53_RS13140	0.79	-2.5
2,897,760	+		LRK53_RS13140	0.84	-2.0
2,897,760	+		LRK53_RS13140	0.84	-1.3
2,897,760	+		LRK53_RS13140	0.84	+0.3
2,897,760	+		LRK53_RS13140	0.84	+0.3
2,897,760	+		LRK53_RS13140	0.84	+1.1
2,897,761	-		LRK53_RS13140	0.84	-1.3
2,897,761	-		LRK53_RS13140	0.84	-2.3
2,897,761	-		LRK53_RS13140	0.84	-0.3
2,897,832	+		LRK53_RS13140	0.89	-0.9
2,897,832	+		LRK53_RS13140	0.89	-2.4
2,897,832	+		LRK53_RS13140	0.89	-2.2
2,897,832	+		LRK53_RS13140	0.89	-3.1
2,897,832	+		LRK53_RS13140	0.89	-0.3
2,897,832	+		LRK53_RS13140	0.89	-2.4
2,897,832	+		LRK53_RS13140	0.89	-0.6
2,897,832	+		LRK53_RS13140	0.89	-2.6
2,897,832	+		LRK53_RS13140	0.89	-3.2
2,897,832	+		LRK53_RS13140	0.89	+1.5
2,897,833	+		LRK53_RS13140	0.89	-0.1
2,897,833	-		LRK53_RS13140	0.89	-0.5
2,897,833	-		LRK53_RS13140	0.89	-2.0
2,897,833	-		LRK53_RS13140	0.89	+1.3
2,897,833	-		LRK53_RS13140	0.89	-3.0
2,897,833	-		LRK53_RS13140	0.89	-0.3
2,897,833	-		LRK53_RS13140	0.89	-1.0
2,897,833	-		LRK53_RS13140	0.89	-1.0
2,897,833	-		LRK53_RS13140	0.89	-0.7
2,897,833	-		LRK53_RS13140	0.89	-0.6
2,897,833	-		LRK53_RS13140	0.89	-1.2
2,897,833	-		LRK53_RS13140	0.89	-3.2
2,897,918	+				-0.6
2,897,919	-				-2.2
2,897,919	-				-1.1
2,898,020	+				-2.4
2,898,020	+				+0.5
2,898,043	+				+0.2
2,898,043	+				-1.3
2,898,043	+				-1.0
2,898,043	+				-0.8
2,898,043	+				+0.8
2,898,043	+				-1.7
2,898,043	+				-0.4
2,898,043	+				-0.7
2,898,043	+				-0.4
2,898,044	-				-0.2
2,898,044	-				+0.3
2,898,044	-				-0.0
2,898,044	-				-0.3
2,898,044	-				+1.3
2,898,044	-				+0.1
2,898,044	-				-0.7
2,898,044	-				-1.5
2,898,044	-				-0.7
2,898,044	-				-1.2
2,898,122	+				+0.4
2,898,122	+				-0.3
2,898,122	+				-0.7
2,898,122	+				-0.9
2,898,123	-				-0.3
2,898,123	-				-0.1
2,898,123	-				-0.0
2,898,123	-				-0.5
2,898,123	-				+0.3
2,898,123	-				-0.6
2,898,123	-				+1.1
2,898,123	-				-0.7
2,898,123	-				-1.3
2,898,183	+				+4.1
2,898,184	-				+0.2
2,898,184	-				-1.3
2,898,184	-				-0.0
2,898,184	-				-0.4
2,898,184	-				-0.6
2,898,184	-				-1.4
2,898,184	-				-0.3
2,898,184	-				+0.4
2,898,184	-				+1.1
2,898,235	+				-0.6
2,898,236	-				+1.3
2,898,273	+				-1.6
2,898,273	+				+0.8
2,898,273	+				-0.5
2,898,273	+				+0.6
2,898,274	-				+0.9
2,898,274	-				+2.3
2,898,274	-				+0.1
2,898,356	-				-0.5
2,898,405	-				-2.0
2,898,436	+				+0.5
2,898,472	+		LRK53_RS13145	0.11	+0.2
2,898,473	-		LRK53_RS13145	0.11	+0.2
2,898,533	-		LRK53_RS13145	0.22	+0.5
2,898,575	+		LRK53_RS13145	0.29	-1.3
2,898,575	+		LRK53_RS13145	0.29	-0.7
2,898,575	+		LRK53_RS13145	0.29	+0.7
2,898,575	+		LRK53_RS13145	0.29	-1.2
2,898,576	-		LRK53_RS13145	0.29	-0.4
2,898,576	-		LRK53_RS13145	0.29	+1.3
2,898,576	-		LRK53_RS13145	0.29	+0.7
2,898,576	-		LRK53_RS13145	0.29	+1.9
2,898,669	-		LRK53_RS13145	0.46	+0.4
2,898,700	-		LRK53_RS13145	0.51	+0.3
2,898,739	+		LRK53_RS13145	0.58	-0.3
2,898,739	+		LRK53_RS13145	0.58	+0.1
2,898,740	-		LRK53_RS13145	0.58	-1.2
2,898,740	-		LRK53_RS13145	0.58	+3.6
2,898,740	-		LRK53_RS13145	0.58	+1.3
2,898,740	-		LRK53_RS13145	0.58	+0.2
2,898,740	-		LRK53_RS13145	0.58	-0.9
2,898,740	-		LRK53_RS13145	0.58	-0.7
2,898,740	-		LRK53_RS13145	0.58	-0.7
2,898,794	+		LRK53_RS13145	0.68	-0.1
2,898,807	+		LRK53_RS13145	0.70	-0.5
2,898,807	+		LRK53_RS13145	0.70	+0.0
2,898,808	-		LRK53_RS13145	0.70	-0.9
2,898,860	+		LRK53_RS13145	0.79	-0.8
2,898,860	+		LRK53_RS13145	0.79	-1.0
2,898,860	+		LRK53_RS13145	0.79	-0.2
2,898,861	-		LRK53_RS13145	0.80	+0.3
2,898,861	-		LRK53_RS13145	0.80	-0.1
2,898,874	-		LRK53_RS13145	0.82	+0.1
2,898,906	+		LRK53_RS13145	0.87	-0.2
2,898,906	+		LRK53_RS13145	0.87	-1.9
2,898,906	+		LRK53_RS13145	0.87	+0.5
2,898,906	+		LRK53_RS13145	0.87	-0.2
2,898,907	-		LRK53_RS13145	0.88	-0.6
2,898,957	+				+1.0
2,898,957	+				-0.6
2,898,957	+				-0.3
2,898,957	+				-1.6
2,898,957	+				-0.0
2,898,957	+				+1.3
2,898,958	-				-1.3
2,898,958	-				+0.7
2,898,958	-				-1.7