Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS12910

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
2,852,380	+		LRK53_RS12905	0.66	-0.1
2,852,380	+		LRK53_RS12905	0.66	-1.1
2,852,380	+		LRK53_RS12905	0.66	-1.8
2,852,380	+		LRK53_RS12905	0.66	+1.2
2,852,380	+		LRK53_RS12905	0.66	+0.2
2,852,380	+		LRK53_RS12905	0.66	-1.2
2,852,380	+		LRK53_RS12905	0.66	-1.4
2,852,381	-		LRK53_RS12905	0.67	+0.2
2,852,381	-		LRK53_RS12905	0.67	-0.6
2,852,381	-		LRK53_RS12905	0.67	+3.5
2,852,458	+		LRK53_RS12905	0.70	-0.1
2,852,458	+		LRK53_RS12905	0.70	-0.8
2,852,458	+		LRK53_RS12905	0.70	+1.2
2,852,458	+		LRK53_RS12905	0.70	-0.6
2,852,458	+		LRK53_RS12905	0.70	-0.6
2,852,458	+		LRK53_RS12905	0.70	-0.4
2,852,458	+		LRK53_RS12905	0.70	-2.7
2,852,458	+		LRK53_RS12905	0.70	-0.5
2,852,458	+		LRK53_RS12905	0.70	-1.4
2,852,458	+		LRK53_RS12905	0.70	-0.7
2,852,459	-		LRK53_RS12905	0.70	+0.8
2,852,459	-		LRK53_RS12905	0.70	-1.4
2,852,459	-		LRK53_RS12905	0.70	+0.8
2,852,459	-		LRK53_RS12905	0.70	+0.2
2,852,459	-		LRK53_RS12905	0.70	-0.3
2,852,459	-		LRK53_RS12905	0.70	+0.2
2,852,459	-		LRK53_RS12905	0.70	-1.8
2,852,459	-		LRK53_RS12905	0.70	+0.4
2,852,459	-		LRK53_RS12905	0.70	-0.3
2,852,459	-		LRK53_RS12905	0.70	-0.4
2,852,459	-		LRK53_RS12905	0.70	-0.4
2,852,459	-		LRK53_RS12905	0.70	-2.6
2,852,459	-		LRK53_RS12905	0.70	-3.3
2,852,488	+		LRK53_RS12905	0.71	+1.2
2,852,488	+		LRK53_RS12905	0.71	+1.2
2,852,489	-		LRK53_RS12905	0.71	-0.5
2,852,519	-		LRK53_RS12905	0.73	+0.2
2,852,519	-		LRK53_RS12905	0.73	+0.3
2,852,623	+		LRK53_RS12905	0.77	-0.1
2,852,668	-		LRK53_RS12905	0.79	-0.1
2,852,839	+		LRK53_RS12905	0.86	-1.6
2,852,977	+				-0.1
2,852,977	+				-2.0
2,852,977	+				-0.3
2,852,977	+				-1.0
2,852,977	+				+1.2
2,852,977	+				+1.2
2,852,977	+				-2.1
2,852,978	-				-0.0
2,852,978	-				-0.0
2,852,978	-				+0.2
2,852,978	-				-0.5
2,852,978	-				+2.2
2,853,070	+				+0.6
2,853,071	-				-0.8
2,853,152	-				-0.6
2,853,152	-				-0.4
2,853,152	-				+0.2
2,853,249	+				+1.2
2,853,249	+				+0.1
2,853,249	+				+0.1
2,853,250	-				-0.8
2,853,250	-				+0.2
2,853,250	-				-0.3
2,853,250	-				-0.4
2,853,250	-				-0.4
2,853,251	+				+0.3
2,853,251	+				-0.9
2,853,251	+				-2.3
2,853,251	+				+0.9
2,853,251	+				-0.6
2,853,251	+				+0.3
2,853,251	+				-0.8
2,853,251	+				-1.6
2,853,252	-				+1.2
2,853,252	-				+1.4
2,853,252	-				-1.1
2,853,252	-				-0.4
2,853,252	-				-0.6
2,853,252	-				-2.3
2,853,252	-				-0.8
2,853,252	-				+1.2
2,853,252	-				+1.2
2,853,252	-				+0.7
2,853,252	-				-1.0
2,853,252	-				+0.6
2,853,252	-				-0.5
2,853,252	-				+0.2
2,853,252	-				-0.4
2,853,252	-				+1.0
2,853,252	-				-0.4
2,853,252	-				+0.2
2,853,252	-				-0.1
2,853,252	-				-0.6
2,853,252	-				+1.4
2,853,282	+				-1.1
2,853,282	+				-0.1
2,853,282	+				-0.0
2,853,282	+				+1.2
2,853,282	+				+0.6
2,853,282	+				-1.1
2,853,283	-				-1.0
2,853,283	-				-1.8
2,853,283	-				-0.5
2,853,283	-				+1.2
2,853,283	-				-0.4
2,853,283	-				-0.6
2,853,283	-				+0.5
2,853,283	-				-0.1
2,853,283	-				-0.4
2,853,283	-				+0.6
2,853,360	+				-0.4
2,853,360	+				-0.8
2,853,360	+				+0.3
2,853,360	+				+1.3
2,853,360	+				-0.8
2,853,361	-				+0.2
2,853,361	-				-1.1
2,853,361	-				-0.8
2,853,361	-				-1.0
2,853,361	-				+1.2
2,853,391	+				-0.4
2,853,391	+				+0.2
2,853,391	+				+0.2
2,853,418	+				-0.2
2,853,418	+				-1.5
2,853,418	+				+1.9
2,853,419	-				+0.7
2,853,419	-				-1.4
2,853,419	-				+0.6
2,853,419	-				+0.0
2,853,451	+				-0.4
2,853,451	+				+0.2
2,853,451	+				+0.6
2,853,451	+				-0.2
2,853,451	+				-0.8
2,853,451	+				-2.5
2,853,451	+				+0.4
2,853,451	+				-0.6
2,853,451	+				-0.4
2,853,451	+				-0.7
2,853,451	+				-0.2
2,853,451	+				-1.4
2,853,452	-				-0.2
2,853,452	-				-0.1
2,853,452	-				-2.6
2,853,452	-				-0.7
2,853,452	-				-1.1
2,853,452	-				+1.2
2,853,452	-				+1.2
2,853,452	-				-0.5
2,853,592	+		LRK53_RS12910	0.14	+1.6
2,853,592	+		LRK53_RS12910	0.14	-1.2
2,853,592	+		LRK53_RS12910	0.14	+0.6
2,853,593	-		LRK53_RS12910	0.14	-0.8
2,853,593	-		LRK53_RS12910	0.14	-1.3
2,853,593	-		LRK53_RS12910	0.14	+0.0
2,853,620	-		LRK53_RS12910	0.15	-0.1
2,853,647	+		LRK53_RS12910	0.17	+1.8
2,853,647	+		LRK53_RS12910	0.17	-1.1
2,853,647	+		LRK53_RS12910	0.17	-1.1
2,853,647	+		LRK53_RS12910	0.17	+3.2
2,853,648	-		LRK53_RS12910	0.17	+1.5
2,853,688	+		LRK53_RS12910	0.19	+0.9
2,853,688	+		LRK53_RS12910	0.19	+0.5
2,853,688	+		LRK53_RS12910	0.19	-0.0
2,853,688	+		LRK53_RS12910	0.19	-0.5
2,853,689	-		LRK53_RS12910	0.19	+2.5
2,853,689	-		LRK53_RS12910	0.19	-0.8
2,853,689	-		LRK53_RS12910	0.19	+0.3
2,853,689	-		LRK53_RS12910	0.19	+0.7
2,853,689	-		LRK53_RS12910	0.19	+0.6
2,853,695	-		LRK53_RS12910	0.19	+2.2
2,853,748	+		LRK53_RS12910	0.22	-0.8
2,853,748	+		LRK53_RS12910	0.22	-0.4
2,853,749	-		LRK53_RS12910	0.22	+0.3
2,853,803	+		LRK53_RS12910	0.24	-1.1
2,853,804	-		LRK53_RS12910	0.24	-1.6
2,853,804	-		LRK53_RS12910	0.24	+0.2
2,853,804	-		LRK53_RS12910	0.24	+1.6
2,853,804	-		LRK53_RS12910	0.24	-0.3
2,853,856	+		LRK53_RS12910	0.27	+0.6
2,853,857	-		LRK53_RS12910	0.27	-1.4
2,853,991	+		LRK53_RS12910	0.34	-0.4
2,853,992	-		LRK53_RS12910	0.34	+0.8
2,853,992	-		LRK53_RS12910	0.34	-0.1
2,854,090	+		LRK53_RS12910	0.39	-1.1
2,854,090	+		LRK53_RS12910	0.39	-0.1
2,854,090	+		LRK53_RS12910	0.39	-2.0
2,854,090	+		LRK53_RS12910	0.39	-1.6
2,854,090	+		LRK53_RS12910	0.39	+0.6
2,854,090	+		LRK53_RS12910	0.39	-1.4
2,854,091	-		LRK53_RS12910	0.39	-0.0
2,854,091	-		LRK53_RS12910	0.39	+0.5
2,854,091	-		LRK53_RS12910	0.39	+1.8
2,854,196	+		LRK53_RS12910	0.44	+1.3
2,854,197	-		LRK53_RS12910	0.44	-0.6
2,854,417	+		LRK53_RS12910	0.55	-0.1
2,854,417	+		LRK53_RS12910	0.55	-0.6
2,854,417	+		LRK53_RS12910	0.55	-0.5
2,854,418	-		LRK53_RS12910	0.55	+1.0
2,854,540	+		LRK53_RS12910	0.61	-0.1
2,854,540	+		LRK53_RS12910	0.61	-0.4
2,854,540	+		LRK53_RS12910	0.61	+0.3
2,854,541	-		LRK53_RS12910	0.61	+0.6
2,854,541	-		LRK53_RS12910	0.61	-1.4
2,854,549	+		LRK53_RS12910	0.62	+0.6
2,854,550	-		LRK53_RS12910	0.62	-2.2
2,854,550	-		LRK53_RS12910	0.62	+1.2
2,854,637	-		LRK53_RS12910	0.66	+0.2
2,854,672	+		LRK53_RS12910	0.68	-1.8
2,854,672	+		LRK53_RS12910	0.68	+2.2
2,854,672	+		LRK53_RS12910	0.68	-1.6
2,854,672	+		LRK53_RS12910	0.68	-1.8
2,854,673	-		LRK53_RS12910	0.68	-0.2
2,854,673	-		LRK53_RS12910	0.68	+0.0
2,854,693	+		LRK53_RS12910	0.69	+2.2
2,854,694	-		LRK53_RS12910	0.69	-0.8
2,854,694	-		LRK53_RS12910	0.69	-0.4
2,854,718	-		LRK53_RS12910	0.70	+2.2
2,854,718	-		LRK53_RS12910	0.70	+0.1
2,854,723	+		LRK53_RS12910	0.71	+0.8
2,854,724	-		LRK53_RS12910	0.71	+0.2
2,854,834	+		LRK53_RS12910	0.76	-0.4
2,854,834	+		LRK53_RS12910	0.76	+0.2
2,854,834	+		LRK53_RS12910	0.76	+0.8
2,854,834	+		LRK53_RS12910	0.76	+1.2
2,854,835	-		LRK53_RS12910	0.76	-0.4
2,854,846	+		LRK53_RS12910	0.77	-0.6
2,854,846	+		LRK53_RS12910	0.77	+2.2
2,854,846	+		LRK53_RS12910	0.77	+0.7
2,854,846	+		LRK53_RS12910	0.77	-0.4
2,854,846	+		LRK53_RS12910	0.77	-0.3
2,854,847	-		LRK53_RS12910	0.77	-0.8
2,854,847	-		LRK53_RS12910	0.77	-0.4
2,854,847	-		LRK53_RS12910	0.77	-2.0
2,854,847	-		LRK53_RS12910	0.77	-0.3
2,854,847	-		LRK53_RS12910	0.77	-0.4
2,854,894	+		LRK53_RS12910	0.79	-0.3
2,854,894	+		LRK53_RS12910	0.79	+1.2
2,854,894	+		LRK53_RS12910	0.79	-0.6
2,854,894	+		LRK53_RS12910	0.79	+0.2
2,854,894	+		LRK53_RS12910	0.79	+0.2
2,854,894	+		LRK53_RS12910	0.79	-0.2
2,854,894	+		LRK53_RS12910	0.79	-0.5
2,854,894	+		LRK53_RS12910	0.79	+2.2
2,854,894	+		LRK53_RS12910	0.79	-1.0
2,854,894	+		LRK53_RS12910	0.79	-1.0
2,854,895	-		LRK53_RS12910	0.79	-1.1
2,854,895	-		LRK53_RS12910	0.79	-1.6
2,854,895	-		LRK53_RS12910	0.79	-2.0
2,854,895	-		LRK53_RS12910	0.79	+0.8
2,854,895	-		LRK53_RS12910	0.79	-0.0
2,854,895	-		LRK53_RS12910	0.79	+0.2
2,854,895	-		LRK53_RS12910	0.79	-0.4
2,854,895	-		LRK53_RS12910	0.79	+0.2
2,854,895	-		LRK53_RS12910	0.79	+0.5
2,854,895	-		LRK53_RS12910	0.79	-0.4
2,854,924	+		LRK53_RS12910	0.81	+0.9
2,854,972	+		LRK53_RS12910	0.83	+0.4
2,854,973	-		LRK53_RS12910	0.83	-1.8
2,854,973	-		LRK53_RS12910	0.83	-1.8
2,854,984	+		LRK53_RS12910	0.84	+0.2
2,854,984	+		LRK53_RS12910	0.84	-0.4
2,854,984	+		LRK53_RS12910	0.84	-0.8
2,854,984	+		LRK53_RS12910	0.84	-0.0
2,854,984	+		LRK53_RS12910	0.84	-1.1
2,854,984	+		LRK53_RS12910	0.84	-0.3
2,854,984	+		LRK53_RS12910	0.84	-0.1
2,854,984	+		LRK53_RS12910	0.84	-0.3
2,854,985	-		LRK53_RS12910	0.84	-2.4
2,854,985	-		LRK53_RS12910	0.84	+1.2
2,854,985	-		LRK53_RS12910	0.84	+0.9
2,854,985	-		LRK53_RS12910	0.84	+0.6
2,855,069	+		LRK53_RS12910	0.88	+1.2
2,855,070	-		LRK53_RS12910	0.88	-0.1
2,855,170	+				-1.8
2,855,170	+				+0.3
2,855,170	+				-1.3
2,855,171	-				+0.0
2,855,171	-				+0.2
2,855,171	-				+1.2
2,855,171	-				+1.2
2,855,171	-				-0.4
2,855,171	-				+0.0
2,855,171	-				-1.5
2,855,171	-				-1.7
2,855,171	-				-1.0
2,855,171	-				+0.6
2,855,197	+				+0.6
2,855,197	+				-1.6
2,855,198	-				-0.2
2,855,198	-				+0.5
2,855,198	-				+1.2
2,855,198	-				-0.5
2,855,224	+				+2.2
2,855,224	+				-0.4
2,855,224	+				+0.2
2,855,224	+				+0.6
2,855,224	+				+0.2
2,855,224	+				-0.1
2,855,224	+				+1.5
2,855,224	+				-0.1
2,855,224	+				+0.9
2,855,224	+				+0.2
2,855,224	+				-0.4
2,855,224	+				+1.2
2,855,225	-				-2.1
2,855,225	-				-2.3
2,855,225	-				+0.3
2,855,225	-				-0.0
2,855,225	-				+1.2
2,855,225	-				-1.5
2,855,225	-				+3.2
2,855,293	-				+0.8
2,855,293	-				+0.2
2,855,426	+				-0.0
2,855,426	+				-1.3
2,855,588	+				+0.6
2,855,588	+				-2.7
2,855,588	+				+0.8
2,855,588	+				-1.0
2,855,588	+				-0.6
2,855,589	-				-1.1
2,855,589	-				-0.3
2,855,589	-				-1.1
2,855,589	-				-1.6
2,855,624	+				-0.4
2,855,624	+				+1.5
2,855,624	+				-1.1
2,855,624	+				-0.1
2,855,624	+				+0.7
2,855,624	+				+0.6
2,855,624	+				+1.2
2,855,624	+				-0.6
2,855,624	+				+1.2
2,855,624	+				-0.1
2,855,624	+				+0.6
2,855,624	+				-0.5
2,855,624	+				-0.6
2,855,624	+				-1.1
2,855,625	-				+2.8
2,855,625	-				-0.6
2,855,625	-				+0.2
2,855,625	-				-1.1
2,855,625	-				-2.3
2,855,625	-				+1.2
2,855,625	-				+0.3
2,855,625	-				-0.8
2,855,626	+				+1.2
2,855,626	+				+1.2
2,855,626	+				+1.8
2,855,627	-				-1.3
2,855,684	+				+0.2
2,855,684	+				+0.0
2,855,684	+				-0.5
2,855,684	+				-0.0
2,855,684	+				-0.1
2,855,684	+				+0.4
2,855,685	-				-0.6
2,855,685	-				+0.0
2,855,685	-				+0.2
2,855,685	-				+2.2
2,855,754	-				-0.1
2,855,783	+		LRK53_RS12915	0.10	-1.4
2,855,783	+		LRK53_RS12915	0.10	-1.2
2,855,784	-		LRK53_RS12915	0.11	-1.5
2,855,784	-		LRK53_RS12915	0.11	+0.4
2,856,002	+		LRK53_RS12915	0.18	+1.2
2,856,002	+		LRK53_RS12915	0.18	-2.0
2,856,002	+		LRK53_RS12915	0.18	-0.0
2,856,005	+		LRK53_RS12915	0.19	-0.8
2,856,005	+		LRK53_RS12915	0.19	+0.8
2,856,005	+		LRK53_RS12915	0.19	+0.6
2,856,005	+		LRK53_RS12915	0.19	-0.2
2,856,005	+		LRK53_RS12915	0.19	-0.1
2,856,005	+		LRK53_RS12915	0.19	-0.8
2,856,005	+		LRK53_RS12915	0.19	-0.1
2,856,005	+		LRK53_RS12915	0.19	-0.8
2,856,005	+		LRK53_RS12915	0.19	-1.6
2,856,005	+		LRK53_RS12915	0.19	-0.4
2,856,005	+		LRK53_RS12915	0.19	-1.4
2,856,005	+		LRK53_RS12915	0.19	+0.6
2,856,005	+		LRK53_RS12915	0.19	-0.4
2,856,005	+		LRK53_RS12915	0.19	-0.7
2,856,005	+		LRK53_RS12915	0.19	+0.8
2,856,006	-		LRK53_RS12915	0.19	-1.4
2,856,006	-		LRK53_RS12915	0.19	-1.8
2,856,006	-		LRK53_RS12915	0.19	-0.4
2,856,006	-		LRK53_RS12915	0.19	-1.4
2,856,006	-		LRK53_RS12915	0.19	-1.0
2,856,006	-		LRK53_RS12915	0.19	-0.4
2,856,006	-		LRK53_RS12915	0.19	-0.4
2,856,006	-		LRK53_RS12915	0.19	+1.2
2,856,006	-		LRK53_RS12915	0.19	+1.2
2,856,068	+		LRK53_RS12915	0.21	-0.9
2,856,095	+		LRK53_RS12915	0.22	+0.0
2,856,095	+		LRK53_RS12915	0.22	-1.4
2,856,095	+		LRK53_RS12915	0.22	+0.2
2,856,095	+		LRK53_RS12915	0.22	+0.4
2,856,095	+		LRK53_RS12915	0.22	-0.7
2,856,095	+		LRK53_RS12915	0.22	-0.9
2,856,095	+		LRK53_RS12915	0.22	-1.1
2,856,095	+		LRK53_RS12915	0.22	+0.6
2,856,095	+		LRK53_RS12915	0.22	+0.4
2,856,095	+		LRK53_RS12915	0.22	-0.5
2,856,095	+		LRK53_RS12915	0.22	-0.6
2,856,095	+		LRK53_RS12915	0.22	-2.7
2,856,096	-		LRK53_RS12915	0.22	+1.0
2,856,096	-		LRK53_RS12915	0.22	-0.4
2,856,096	-		LRK53_RS12915	0.22	-1.9
2,856,096	-		LRK53_RS12915	0.22	+0.6
2,856,096	-		LRK53_RS12915	0.22	-1.1
2,856,096	-		LRK53_RS12915	0.22	+1.6
2,856,096	-		LRK53_RS12915	0.22	-0.8
2,856,096	-		LRK53_RS12915	0.22	-2.0
2,856,096	-		LRK53_RS12915	0.22	+0.0
2,856,179	+		LRK53_RS12915	0.25	-1.1
2,856,179	+		LRK53_RS12915	0.25	-2.3
2,856,179	+		LRK53_RS12915	0.25	+1.2
2,856,180	-		LRK53_RS12915	0.25	-0.8
2,856,180	-		LRK53_RS12915	0.25	-2.1
2,856,180	-		LRK53_RS12915	0.25	-2.1
2,856,180	-		LRK53_RS12915	0.25	-1.8
2,856,180	-		LRK53_RS12915	0.25	+0.8
2,856,180	-		LRK53_RS12915	0.25	+0.7
2,856,180	-		LRK53_RS12915	0.25	-0.3
2,856,212	+		LRK53_RS12915	0.26	+0.4
2,856,213	-		LRK53_RS12915	0.26	-0.5
2,856,213	-		LRK53_RS12915	0.26	+1.8
2,856,213	-		LRK53_RS12915	0.26	+0.9
2,856,227	+		LRK53_RS12915	0.27	-1.3
2,856,227	+		LRK53_RS12915	0.27	-0.4
2,856,228	-		LRK53_RS12915	0.27	-0.8
2,856,228	-		LRK53_RS12915	0.27	+2.2
2,856,228	-		LRK53_RS12915	0.27	+0.2
2,856,228	-		LRK53_RS12915	0.27	+0.4
2,856,228	-		LRK53_RS12915	0.27	-1.9
2,856,239	+		LRK53_RS12915	0.27	-0.8
2,856,239	+		LRK53_RS12915	0.27	-1.9
2,856,239	+		LRK53_RS12915	0.27	-0.1
2,856,239	+		LRK53_RS12915	0.27	-0.4
2,856,239	+		LRK53_RS12915	0.27	+0.3
2,856,240	-		LRK53_RS12915	0.27	-0.7
2,856,240	-		LRK53_RS12915	0.27	-2.0
2,856,240	-		LRK53_RS12915	0.27	-0.4
2,856,240	-		LRK53_RS12915	0.27	-0.8
2,856,240	-		LRK53_RS12915	0.27	-0.6
2,856,240	-		LRK53_RS12915	0.27	-0.3