Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS12495

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
2,767,162	+				+0.5
2,767,162	+				+0.6
2,767,162	+				-0.3
2,767,163	-				-1.1
2,767,163	-				-0.6
2,767,163	-				-0.4
2,767,238	+				-0.7
2,767,352	+				-0.3
2,767,352	+				-1.1
2,767,352	+				-0.4
2,767,353	-				-0.8
2,767,353	-				-1.6
2,767,354	+				+1.5
2,767,354	+				-0.5
2,767,354	+				+0.2
2,767,354	+				-0.7
2,767,354	+				-2.8
2,767,354	+				+0.5
2,767,354	+				+0.8
2,767,354	+				-0.7
2,767,354	+				+0.2
2,767,354	+				-0.4
2,767,354	+				-0.6
2,767,354	+				+0.7
2,767,354	+				-1.8
2,767,355	-				+0.4
2,767,355	-				-0.8
2,767,355	-				-1.4
2,767,355	-				-2.5
2,767,355	-				+0.7
2,767,355	-				-1.4
2,767,355	-				-0.4
2,767,355	-				-1.1
2,767,355	-				-0.8
2,767,355	-				-0.2
2,767,355	-				+1.2
2,767,355	-				-0.8
2,767,355	-				+1.2
2,767,355	-				+0.6
2,767,355	-				-0.6
2,767,355	-				+3.2
2,767,644	+		LRK53_RS12485	0.74	+0.4
2,767,644	+		LRK53_RS12485	0.74	+1.2
2,767,645	-		LRK53_RS12485	0.74	-0.8
2,767,645	-		LRK53_RS12485	0.74	-0.1
2,767,645	-		LRK53_RS12485	0.74	+1.9
2,767,645	-		LRK53_RS12485	0.74	+0.2
2,767,736	+				-0.4
2,767,890	+		LRK53_RS12490	0.34	-0.4
2,767,890	+		LRK53_RS12490	0.34	+2.8
2,767,890	+		LRK53_RS12490	0.34	-0.9
2,767,890	+		LRK53_RS12490	0.34	-0.4
2,767,891	-		LRK53_RS12490	0.34	+0.2
2,768,052	-		LRK53_RS12490	0.75	-0.1
2,768,052	-		LRK53_RS12490	0.75	-1.5
2,768,079	+		LRK53_RS12490	0.82	+0.8
2,768,079	+		LRK53_RS12490	0.82	-2.3
2,768,079	+		LRK53_RS12490	0.82	+1.4
2,768,079	+		LRK53_RS12490	0.82	-1.1
2,768,079	+		LRK53_RS12490	0.82	+0.3
2,768,079	+		LRK53_RS12490	0.82	+0.5
2,768,079	+		LRK53_RS12490	0.82	-0.6
2,768,080	-		LRK53_RS12490	0.82	-0.1
2,768,080	-		LRK53_RS12490	0.82	-1.2
2,768,080	-		LRK53_RS12490	0.82	-0.4
2,768,080	-		LRK53_RS12490	0.82	-0.8
2,768,080	-		LRK53_RS12490	0.82	-1.1
2,768,080	-		LRK53_RS12490	0.82	-0.4
2,768,080	-		LRK53_RS12490	0.82	-2.1
2,768,081	+		LRK53_RS12490	0.82	-0.8
2,768,081	+		LRK53_RS12490	0.82	-1.8
2,768,081	+		LRK53_RS12490	0.82	-0.2
2,768,081	+		LRK53_RS12490	0.82	-0.6
2,768,081	+		LRK53_RS12490	0.82	-0.4
2,768,081	+		LRK53_RS12490	0.82	-1.5
2,768,081	+		LRK53_RS12490	0.82	-1.5
2,768,081	+		LRK53_RS12490	0.82	-0.8
2,768,081	+		LRK53_RS12490	0.82	+0.2
2,768,082	-		LRK53_RS12490	0.83	-0.4
2,768,082	-		LRK53_RS12490	0.83	-0.8
2,768,082	-		LRK53_RS12490	0.83	+1.2
2,768,082	-		LRK53_RS12490	0.83	+1.2
2,768,082	-		LRK53_RS12490	0.83	+1.2
2,768,082	-		LRK53_RS12490	0.83	-1.4
2,768,082	-		LRK53_RS12490	0.83	-3.1
2,768,082	-		LRK53_RS12490	0.83	+2.8
2,768,101	+		LRK53_RS12490	0.87	-1.8
2,768,101	+		LRK53_RS12490	0.87	-0.8
2,768,102	-		LRK53_RS12490	0.88	-0.4
2,768,372	+		LRK53_RS12495	0.24	-0.8
2,768,409	+		LRK53_RS12495	0.27	-0.8
2,768,409	+		LRK53_RS12495	0.27	+1.6
2,768,409	+		LRK53_RS12495	0.27	-2.3
2,768,409	+		LRK53_RS12495	0.27	-1.1
2,768,409	+		LRK53_RS12495	0.27	+0.5
2,768,409	+		LRK53_RS12495	0.27	-1.4
2,768,409	+		LRK53_RS12495	0.27	-0.1
2,768,410	-		LRK53_RS12495	0.27	-0.8
2,768,410	-		LRK53_RS12495	0.27	+0.6
2,768,442	+		LRK53_RS12495	0.30	-0.6
2,768,442	+		LRK53_RS12495	0.30	-0.1
2,768,442	+		LRK53_RS12495	0.30	+1.4
2,768,442	+		LRK53_RS12495	0.30	-0.4
2,768,442	+		LRK53_RS12495	0.30	+0.2
2,768,442	+		LRK53_RS12495	0.30	-1.2
2,768,442	+		LRK53_RS12495	0.30	+0.2
2,768,442	+		LRK53_RS12495	0.30	-0.6
2,768,442	+		LRK53_RS12495	0.30	-0.8
2,768,442	+		LRK53_RS12495	0.30	-0.6
2,768,442	+		LRK53_RS12495	0.30	-0.6
2,768,442	+		LRK53_RS12495	0.30	-1.0
2,768,442	+		LRK53_RS12495	0.30	-0.8
2,768,442	+		LRK53_RS12495	0.30	+0.8
2,768,442	+		LRK53_RS12495	0.30	-1.0
2,768,442	+		LRK53_RS12495	0.30	-1.4
2,768,443	-		LRK53_RS12495	0.30	-1.0
2,768,443	-		LRK53_RS12495	0.30	-0.3
2,768,443	-		LRK53_RS12495	0.30	+1.2
2,768,443	-		LRK53_RS12495	0.30	-1.5
2,768,443	-		LRK53_RS12495	0.30	-0.1
2,768,443	-		LRK53_RS12495	0.30	-2.4
2,768,443	-		LRK53_RS12495	0.30	-1.4
2,768,443	-		LRK53_RS12495	0.30	-0.2
2,768,443	-		LRK53_RS12495	0.30	-1.4
2,768,443	-		LRK53_RS12495	0.30	-1.0
2,768,443	-		LRK53_RS12495	0.30	-0.4
2,768,443	-		LRK53_RS12495	0.30	+0.4
2,768,443	-		LRK53_RS12495	0.30	-1.8
2,768,443	-		LRK53_RS12495	0.30	+0.2
2,768,443	-		LRK53_RS12495	0.30	+0.2
2,768,534	+		LRK53_RS12495	0.38	+0.3
2,768,682	+		LRK53_RS12495	0.52	+0.8
2,768,682	+		LRK53_RS12495	0.52	-0.9
2,768,682	+		LRK53_RS12495	0.52	-0.4
2,768,682	+		LRK53_RS12495	0.52	-1.1
2,768,683	-		LRK53_RS12495	0.52	+0.2
2,768,683	-		LRK53_RS12495	0.52	-0.7
2,768,683	-		LRK53_RS12495	0.52	-0.8
2,768,683	-		LRK53_RS12495	0.52	-1.4
2,768,683	-		LRK53_RS12495	0.52	+0.0
2,769,096	+		LRK53_RS12495	0.89	-2.2
2,769,096	+		LRK53_RS12495	0.89	-2.3
2,769,097	-		LRK53_RS12495	0.89	-1.6
2,769,182	+				+1.0
2,769,183	-				+0.2
2,769,225	+				+0.3
2,769,225	+				+0.3
2,769,225	+				+0.3
2,769,225	+				-1.1
2,769,226	-				-2.1
2,769,226	-				+0.2
2,769,226	-				+1.8
2,769,226	-				-0.4
2,769,226	-				-1.1
2,769,226	-				-0.8
2,769,226	-				-0.4
2,769,226	-				-2.0
2,769,227	+				-0.4
2,769,227	+				-0.6
2,769,228	-				-0.8
2,769,228	-				+0.3
2,769,307	+				-0.8
2,769,350	-		LRK53_RS12500	0.11	-0.4
2,769,350	-		LRK53_RS12500	0.11	+0.2
2,769,350	-		LRK53_RS12500	0.11	+2.8
2,769,350	-		LRK53_RS12500	0.11	-0.9
2,769,530	+		LRK53_RS12500	0.54	-0.5
2,769,530	+		LRK53_RS12500	0.54	+1.0
2,769,530	+		LRK53_RS12500	0.54	+2.5
2,769,530	+		LRK53_RS12500	0.54	-2.4
2,769,530	+		LRK53_RS12500	0.54	-1.8
2,769,530	+		LRK53_RS12500	0.54	-0.4
2,769,530	+		LRK53_RS12500	0.54	-0.3
2,769,530	+		LRK53_RS12500	0.54	-2.0
2,769,530	+		LRK53_RS12500	0.54	-1.0
2,769,531	-		LRK53_RS12500	0.54	-0.5
2,769,531	-		LRK53_RS12500	0.54	-1.6
2,769,531	-		LRK53_RS12500	0.54	-1.1
2,769,531	-		LRK53_RS12500	0.54	-0.7
2,769,531	-		LRK53_RS12500	0.54	-1.6
2,769,531	-		LRK53_RS12500	0.54	-1.8
2,769,540	+		LRK53_RS12500	0.56	-0.4
2,769,540	+		LRK53_RS12500	0.56	-1.1
2,769,540	+		LRK53_RS12500	0.56	-0.8
2,769,540	+		LRK53_RS12500	0.56	-0.4
2,769,540	+		LRK53_RS12500	0.56	-0.3
2,769,540	+		LRK53_RS12500	0.56	-0.8
2,769,540	+		LRK53_RS12500	0.56	+0.6
2,769,540	+		LRK53_RS12500	0.56	-0.6
2,769,540	+		LRK53_RS12500	0.56	-1.4
2,769,541	-		LRK53_RS12500	0.56	-0.6
2,769,541	-		LRK53_RS12500	0.56	+0.2
2,769,541	-		LRK53_RS12500	0.56	+0.3
2,769,541	-		LRK53_RS12500	0.56	-0.8
2,769,541	-		LRK53_RS12500	0.56	-0.2
2,769,541	-		LRK53_RS12500	0.56	+0.2
2,769,541	-		LRK53_RS12500	0.56	-1.4
2,769,541	-		LRK53_RS12500	0.56	+1.4
2,769,541	-		LRK53_RS12500	0.56	+0.2
2,769,541	-		LRK53_RS12500	0.56	-1.1
2,769,552	+		LRK53_RS12500	0.59	+0.2
2,769,552	+		LRK53_RS12500	0.59	+0.8
2,769,552	+		LRK53_RS12500	0.59	+1.2
2,769,552	+		LRK53_RS12500	0.59	-0.8
2,769,552	+		LRK53_RS12500	0.59	-0.8
2,769,553	-		LRK53_RS12500	0.59	-0.9
2,769,553	-		LRK53_RS12500	0.59	+1.0
2,769,553	-		LRK53_RS12500	0.59	-0.0
2,769,553	-		LRK53_RS12500	0.59	+0.2
2,769,553	-		LRK53_RS12500	0.59	-0.6
2,769,553	-		LRK53_RS12500	0.59	-1.0
2,769,553	-		LRK53_RS12500	0.59	+0.2
2,769,657	+		LRK53_RS12500	0.84	+0.6
2,769,685	+				+1.2
2,769,685	+				+0.8
2,769,685	+				-0.8
2,769,685	+				-0.4
2,769,686	-				-1.8
2,769,686	-				-1.8
2,769,686	-				-0.3
2,769,689	+				-0.6
2,769,689	+				-0.7
2,769,689	+				-0.9
2,769,690	-				+0.4
2,769,697	+				+0.7
2,769,697	+				-0.4
2,769,697	+				-0.9
2,769,697	+				-1.1
2,769,697	+				-1.1
2,769,697	+				-1.4
2,769,697	+				-1.0
2,769,697	+				-0.2
2,769,697	+				-1.0
2,769,697	+				+0.3
2,769,697	+				-0.3
2,769,697	+				-0.8
2,769,697	+				-1.9
2,769,697	+				-0.6
2,769,698	-				+0.9
2,769,698	-				+2.8
2,769,698	-				-0.4
2,769,698	-				-1.0
2,769,698	-				-1.1