Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS12355

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
2,740,829	-		LRK53_RS12350	0.76	+0.9
2,740,838	+		LRK53_RS12350	0.76	-1.0
2,740,838	+		LRK53_RS12350	0.76	-1.2
2,740,839	-		LRK53_RS12350	0.76	-0.9
2,740,839	-		LRK53_RS12350	0.76	-0.0
2,740,839	-		LRK53_RS12350	0.76	-1.1
2,740,839	-		LRK53_RS12350	0.76	+3.0
2,740,839	-		LRK53_RS12350	0.76	+0.5
2,740,839	-		LRK53_RS12350	0.76	+0.1
2,740,839	-		LRK53_RS12350	0.76	-0.2
2,740,839	-		LRK53_RS12350	0.76	-1.8
2,740,868	+		LRK53_RS12350	0.77	+1.2
2,740,868	+		LRK53_RS12350	0.77	-0.6
2,740,868	+		LRK53_RS12350	0.77	-1.6
2,740,869	-		LRK53_RS12350	0.77	-0.5
2,740,869	-		LRK53_RS12350	0.77	-0.1
2,740,869	-		LRK53_RS12350	0.77	-0.6
2,740,869	-		LRK53_RS12350	0.77	+0.0
2,741,019	+		LRK53_RS12350	0.83	-1.9
2,741,019	+		LRK53_RS12350	0.83	-1.6
2,741,019	+		LRK53_RS12350	0.83	+0.2
2,741,019	+		LRK53_RS12350	0.83	-0.8
2,741,019	+		LRK53_RS12350	0.83	+0.5
2,741,019	+		LRK53_RS12350	0.83	+0.2
2,741,019	+		LRK53_RS12350	0.83	-0.4
2,741,019	+		LRK53_RS12350	0.83	-0.6
2,741,019	+		LRK53_RS12350	0.83	-2.5
2,741,019	+		LRK53_RS12350	0.83	-0.0
2,741,019	+		LRK53_RS12350	0.83	-0.2
2,741,019	+		LRK53_RS12350	0.83	-1.9
2,741,019	+		LRK53_RS12350	0.83	-0.0
2,741,019	+		LRK53_RS12350	0.83	-0.4
2,741,019	+		LRK53_RS12350	0.83	+2.2
2,741,020	-		LRK53_RS12350	0.83	-0.1
2,741,020	-		LRK53_RS12350	0.83	-1.6
2,741,020	-		LRK53_RS12350	0.83	+1.6
2,741,020	-		LRK53_RS12350	0.83	+1.2
2,741,020	-		LRK53_RS12350	0.83	+1.2
2,741,020	-		LRK53_RS12350	0.83	-1.1
2,741,020	-		LRK53_RS12350	0.83	-0.4
2,741,020	-		LRK53_RS12350	0.83	-2.1
2,741,020	-		LRK53_RS12350	0.83	-2.7
2,741,020	-		LRK53_RS12350	0.83	-1.2
2,741,020	-		LRK53_RS12350	0.83	+2.2
2,741,020	-		LRK53_RS12350	0.83	-0.9
2,741,020	-		LRK53_RS12350	0.83	-0.4
2,741,020	-		LRK53_RS12350	0.83	-0.4
2,741,020	-		LRK53_RS12350	0.83	-0.6
2,741,020	-		LRK53_RS12350	0.83	-1.3
2,741,020	-		LRK53_RS12350	0.83	-0.8
2,741,020	-		LRK53_RS12350	0.83	-0.6
2,741,020	-		LRK53_RS12350	0.83	+1.2
2,741,020	-		LRK53_RS12350	0.83	-0.4
2,741,020	-		LRK53_RS12350	0.83	-0.5
2,741,020	-		LRK53_RS12350	0.83	+0.5
2,741,106	+		LRK53_RS12350	0.86	-1.6
2,741,106	+		LRK53_RS12350	0.86	+0.2
2,741,106	+		LRK53_RS12350	0.86	-0.7
2,741,106	+		LRK53_RS12350	0.86	-1.3
2,741,107	-		LRK53_RS12350	0.86	+0.0
2,741,107	-		LRK53_RS12350	0.86	+0.2
2,741,107	-		LRK53_RS12350	0.86	+1.2
2,741,107	-		LRK53_RS12350	0.86	-0.6
2,741,107	-		LRK53_RS12350	0.86	+0.5
2,741,211	+		LRK53_RS12350	0.90	+2.2
2,741,212	-		LRK53_RS12350	0.90	+0.4
2,741,262	+				+0.8
2,741,262	+				+0.2
2,741,262	+				+0.2
2,741,262	+				-2.3
2,741,263	-				+0.4
2,741,263	-				-0.1
2,741,263	-				-2.0
2,741,263	-				-0.5
2,741,263	-				-0.6
2,741,310	+				+0.3
2,741,310	+				+2.8
2,741,451	+				-0.0
2,741,451	+				-0.6
2,741,451	+				-1.4
2,741,451	+				-0.1
2,741,451	+				-0.9
2,741,452	-				+1.2
2,741,452	-				+0.5
2,741,522	+				+0.1
2,741,522	+				+0.2
2,741,522	+				-1.2
2,741,522	+				+2.2
2,741,522	+				+1.2
2,741,522	+				+0.7
2,741,522	+				+2.2
2,741,522	+				+2.8
2,741,523	-				-1.8
2,741,523	-				-0.0
2,741,523	-				+0.6
2,741,523	-				+1.2
2,741,523	-				-1.0
2,741,646	+				+1.2
2,741,646	+				+0.9
2,741,647	-				-0.4
2,741,647	-				-0.3
2,741,647	-				+1.2
2,741,652	+				-0.3
2,741,652	+				-1.6
2,741,652	+				+0.6
2,741,652	+				-0.2
2,741,652	+				-1.1
2,741,652	+				+0.5
2,741,652	+				+0.9
2,741,652	+				+0.6
2,741,652	+				+0.3
2,741,653	-		LRK53_RS12355	0.10	+0.9
2,741,653	-		LRK53_RS12355	0.10	-0.7
2,741,653	-		LRK53_RS12355	0.10	-0.1
2,741,653	-		LRK53_RS12355	0.10	+0.4
2,741,653	-		LRK53_RS12355	0.10	-0.7
2,741,653	-		LRK53_RS12355	0.10	-0.2
2,741,653	-		LRK53_RS12355	0.10	-0.0
2,741,653	-		LRK53_RS12355	0.10	-1.1
2,741,653	-		LRK53_RS12355	0.10	-0.6
2,741,653	-		LRK53_RS12355	0.10	+0.0
2,741,653	-		LRK53_RS12355	0.10	-0.7
2,741,654	+		LRK53_RS12355	0.10	-0.9
2,741,654	+		LRK53_RS12355	0.10	-1.4
2,741,654	+		LRK53_RS12355	0.10	-0.2
2,741,654	+		LRK53_RS12355	0.10	-0.1
2,741,654	+		LRK53_RS12355	0.10	-0.4
2,741,654	+		LRK53_RS12355	0.10	-0.1
2,741,654	+		LRK53_RS12355	0.10	+2.8
2,741,654	+		LRK53_RS12355	0.10	-0.4
2,741,654	+		LRK53_RS12355	0.10	+0.2
2,741,654	+		LRK53_RS12355	0.10	+1.8
2,741,654	+		LRK53_RS12355	0.10	+0.4
2,741,654	+		LRK53_RS12355	0.10	+0.3
2,741,654	+		LRK53_RS12355	0.10	+0.5
2,741,654	+		LRK53_RS12355	0.10	-0.4
2,741,654	+		LRK53_RS12355	0.10	+1.2
2,741,654	+		LRK53_RS12355	0.10	-1.4
2,741,654	+		LRK53_RS12355	0.10	+0.9
2,741,654	+		LRK53_RS12355	0.10	-1.4
2,741,654	+		LRK53_RS12355	0.10	-2.0
2,741,654	+		LRK53_RS12355	0.10	-2.1
2,741,654	+		LRK53_RS12355	0.10	-1.1
2,741,655	-		LRK53_RS12355	0.10	-0.4
2,741,655	-		LRK53_RS12355	0.10	-0.5
2,741,655	-		LRK53_RS12355	0.10	-0.2
2,741,655	-		LRK53_RS12355	0.10	-1.1
2,741,655	-		LRK53_RS12355	0.10	+0.5
2,741,655	-		LRK53_RS12355	0.10	-1.9
2,741,655	-		LRK53_RS12355	0.10	-0.3
2,741,655	-		LRK53_RS12355	0.10	+1.2
2,741,655	-		LRK53_RS12355	0.10	+1.2
2,741,655	-		LRK53_RS12355	0.10	+0.8
2,741,655	-		LRK53_RS12355	0.10	+0.2
2,741,728	+		LRK53_RS12355	0.20	-1.1
2,741,728	+		LRK53_RS12355	0.20	-0.1
2,741,728	+		LRK53_RS12355	0.20	+0.4
2,741,728	+		LRK53_RS12355	0.20	-1.2
2,741,728	+		LRK53_RS12355	0.20	+0.2
2,741,728	+		LRK53_RS12355	0.20	-0.7
2,741,728	+		LRK53_RS12355	0.20	+1.5
2,741,729	-		LRK53_RS12355	0.20	-1.6
2,741,729	-		LRK53_RS12355	0.20	+0.2
2,741,729	-		LRK53_RS12355	0.20	-1.9
2,741,729	-		LRK53_RS12355	0.20	-0.9
2,741,729	-		LRK53_RS12355	0.20	-1.3
2,741,762	+		LRK53_RS12355	0.24	+0.8
2,741,762	+		LRK53_RS12355	0.24	-1.0
2,741,763	-		LRK53_RS12355	0.24	-1.8
2,741,828	+		LRK53_RS12355	0.33	-0.1
2,741,828	+		LRK53_RS12355	0.33	-0.9
2,741,843	+		LRK53_RS12355	0.34	-0.9
2,741,843	+		LRK53_RS12355	0.34	-1.4
2,741,843	+		LRK53_RS12355	0.34	+0.6
2,741,843	+		LRK53_RS12355	0.34	+1.7
2,741,843	+		LRK53_RS12355	0.34	-1.8
2,741,843	+		LRK53_RS12355	0.34	+1.2
2,741,843	+		LRK53_RS12355	0.34	-1.3
2,741,843	+		LRK53_RS12355	0.34	+1.2
2,741,843	+		LRK53_RS12355	0.34	-2.2
2,741,843	+		LRK53_RS12355	0.34	+1.2
2,741,843	+		LRK53_RS12355	0.34	-0.8
2,741,843	+		LRK53_RS12355	0.34	+0.7
2,741,844	-		LRK53_RS12355	0.35	-0.4
2,741,844	-		LRK53_RS12355	0.35	+0.0
2,741,844	-		LRK53_RS12355	0.35	-0.8
2,741,844	-		LRK53_RS12355	0.35	-1.6
2,741,844	-		LRK53_RS12355	0.35	-1.4
2,741,844	-		LRK53_RS12355	0.35	-0.7
2,741,844	-		LRK53_RS12355	0.35	+2.8
2,741,844	-		LRK53_RS12355	0.35	-0.4
2,741,844	-		LRK53_RS12355	0.35	-1.4
2,741,844	-		LRK53_RS12355	0.35	-0.1
2,741,844	-		LRK53_RS12355	0.35	+3.0
2,741,844	-		LRK53_RS12355	0.35	-1.0
2,741,885	+		LRK53_RS12355	0.40	-1.5
2,741,885	+		LRK53_RS12355	0.40	-1.1
2,741,885	+		LRK53_RS12355	0.40	-3.6
2,741,885	+		LRK53_RS12355	0.40	-0.0
2,741,885	+		LRK53_RS12355	0.40	-0.4
2,741,885	+		LRK53_RS12355	0.40	+0.5
2,741,885	+		LRK53_RS12355	0.40	-0.2
2,741,885	+		LRK53_RS12355	0.40	-1.6
2,741,885	+		LRK53_RS12355	0.40	-0.3
2,741,885	+		LRK53_RS12355	0.40	+0.5
2,741,885	+		LRK53_RS12355	0.40	-1.5
2,741,885	+		LRK53_RS12355	0.40	+0.5
2,741,885	+		LRK53_RS12355	0.40	-0.4
2,741,885	+		LRK53_RS12355	0.40	+0.0
2,741,886	-		LRK53_RS12355	0.40	-0.9
2,741,886	-		LRK53_RS12355	0.40	-2.1
2,741,886	-		LRK53_RS12355	0.40	+1.2
2,741,886	-		LRK53_RS12355	0.40	-0.8
2,741,886	-		LRK53_RS12355	0.40	-1.2
2,741,886	-		LRK53_RS12355	0.40	-0.8
2,741,886	-		LRK53_RS12355	0.40	+0.5
2,741,886	-		LRK53_RS12355	0.40	-2.3
2,742,032	+		LRK53_RS12355	0.59	-2.1
2,742,303	-				-1.6
2,742,345	+				+0.0
2,742,345	+				+0.3
2,742,345	+				-0.6
2,742,346	-				-0.6
2,742,346	-				-1.3
2,742,346	-				-0.2
2,742,346	-				+1.2
2,742,346	-				+1.5
2,742,504	-				+1.2
2,742,874	+				+0.4
2,742,976	+				+0.2
2,742,976	+				-0.4
2,742,976	+				+0.2
2,742,976	+				-0.2
2,742,976	+				-0.8
2,742,976	+				+0.0
2,742,977	-				+1.2
2,742,977	-				-0.0
2,742,977	-				-0.4
2,742,977	-				-2.4
2,742,977	-				-0.4
2,743,018	+		LRK53_RS12360	0.12	-0.4
2,743,018	+		LRK53_RS12360	0.12	+1.6
2,743,019	-		LRK53_RS12360	0.12	-0.6
2,743,019	-		LRK53_RS12360	0.12	-1.4
2,743,019	-		LRK53_RS12360	0.12	-0.4
2,743,033	+		LRK53_RS12360	0.12	+1.2
2,743,034	-		LRK53_RS12360	0.12	-0.8
2,743,096	+		LRK53_RS12360	0.15	-2.1
2,743,096	+		LRK53_RS12360	0.15	-0.9
2,743,096	+		LRK53_RS12360	0.15	-0.4
2,743,097	-		LRK53_RS12360	0.15	-1.8
2,743,097	-		LRK53_RS12360	0.15	-0.4
2,743,097	-		LRK53_RS12360	0.15	+0.8
2,743,097	-		LRK53_RS12360	0.15	+0.2
2,743,097	-		LRK53_RS12360	0.15	-0.1
2,743,097	-		LRK53_RS12360	0.15	-0.1
2,743,231	+		LRK53_RS12360	0.21	-0.0
2,743,231	+		LRK53_RS12360	0.21	+1.4
2,743,231	+		LRK53_RS12360	0.21	+1.2
2,743,231	+		LRK53_RS12360	0.21	-0.0
2,743,231	+		LRK53_RS12360	0.21	-0.7
2,743,232	-		LRK53_RS12360	0.21	-0.2
2,743,232	-		LRK53_RS12360	0.21	-1.1
2,743,232	-		LRK53_RS12360	0.21	+2.2
2,743,261	+		LRK53_RS12360	0.22	-0.8
2,743,261	+		LRK53_RS12360	0.22	-2.3
2,743,261	+		LRK53_RS12360	0.22	+2.0
2,743,261	+		LRK53_RS12360	0.22	-0.2
2,743,261	+		LRK53_RS12360	0.22	-0.2
2,743,262	-		LRK53_RS12360	0.22	-0.3
2,743,262	-		LRK53_RS12360	0.22	-0.2