Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS12330

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
2,735,390	+		LRK53_RS12325	0.67	-0.2
2,735,390	+		LRK53_RS12325	0.67	-1.7
2,735,391	-		LRK53_RS12325	0.67	-1.6
2,735,391	-		LRK53_RS12325	0.67	+0.2
2,735,391	-		LRK53_RS12325	0.67	+0.2
2,735,391	-		LRK53_RS12325	0.67	-0.8
2,735,580	-		LRK53_RS12325	0.78	+0.8
2,735,580	-		LRK53_RS12325	0.78	-1.4
2,735,609	+		LRK53_RS12325	0.80	-2.1
2,735,610	-		LRK53_RS12325	0.80	-1.0
2,735,717	+		LRK53_RS12325	0.85	-0.8
2,735,717	+		LRK53_RS12325	0.85	-0.5
2,735,717	+		LRK53_RS12325	0.85	+1.4
2,735,717	+		LRK53_RS12325	0.85	+1.2
2,735,717	+		LRK53_RS12325	0.85	-1.6
2,735,717	+		LRK53_RS12325	0.85	-0.6
2,735,717	+		LRK53_RS12325	0.85	-0.7
2,735,717	+		LRK53_RS12325	0.85	-1.6
2,735,717	+		LRK53_RS12325	0.85	-2.0
2,735,717	+		LRK53_RS12325	0.85	+1.2
2,735,717	+		LRK53_RS12325	0.85	+0.2
2,735,717	+		LRK53_RS12325	0.85	+1.8
2,735,717	+		LRK53_RS12325	0.85	+1.4
2,735,717	+		LRK53_RS12325	0.85	+0.0
2,735,717	+		LRK53_RS12325	0.85	-1.1
2,735,717	+		LRK53_RS12325	0.85	-0.6
2,735,717	+		LRK53_RS12325	0.85	-0.0
2,735,717	+		LRK53_RS12325	0.85	-0.1
2,735,718	+		LRK53_RS12325	0.86	+1.6
2,735,718	-		LRK53_RS12325	0.86	-0.0
2,735,718	-		LRK53_RS12325	0.86	-0.1
2,735,718	-		LRK53_RS12325	0.86	-0.2
2,735,718	-		LRK53_RS12325	0.86	+0.4
2,735,718	-		LRK53_RS12325	0.86	-1.1
2,735,718	-		LRK53_RS12325	0.86	+0.8
2,735,718	-		LRK53_RS12325	0.86	+0.4
2,735,718	-		LRK53_RS12325	0.86	+0.2
2,735,718	-		LRK53_RS12325	0.86	-1.4
2,735,718	-		LRK53_RS12325	0.86	-0.1
2,735,718	-		LRK53_RS12325	0.86	-2.4
2,735,891	+				-0.1
2,735,891	+				-1.5
2,735,891	+				+0.5
2,735,891	+				-0.5
2,735,891	+				-2.1
2,735,892	-				-1.7
2,735,892	-				+1.2
2,735,892	-				+2.2
2,735,892	-				-0.6
2,735,975	+				-0.4
2,735,976	-				-2.0
2,735,976	-				-0.4
2,735,976	-				-1.1
2,735,987	-				+1.2
2,735,987	-				-0.1
2,735,987	-				-0.2
2,735,987	-				-1.4
2,735,987	-				-2.0
2,735,987	-				-1.3
2,735,987	-				+0.1
2,735,987	-				-1.1
2,735,987	-				-2.1
2,735,987	-				-2.0
2,735,987	-				-0.2
2,736,113	+				+0.2
2,736,113	+				-0.8
2,736,113	+				+1.0
2,736,113	+				-0.1
2,736,113	+				+1.6
2,736,113	+				+0.9
2,736,114	-				+1.0
2,736,114	-				-1.1
2,736,114	-				+0.4
2,736,114	-				+0.2
2,736,114	-				+1.8
2,736,114	-				-0.1
2,736,125	+				+0.2
2,736,125	+				-0.8
2,736,125	+				+0.0
2,736,125	+				+0.8
2,736,125	+				-0.4
2,736,125	+				-0.8
2,736,126	-				-0.8
2,736,126	-				+0.5
2,736,126	-				-1.6
2,736,126	-				+1.2
2,736,126	-				+0.0
2,736,126	-				-1.3
2,736,242	+		LRK53_RS12330	0.18	+0.8
2,736,242	+		LRK53_RS12330	0.18	-0.6
2,736,243	-		LRK53_RS12330	0.18	-1.4
2,736,243	-		LRK53_RS12330	0.18	-1.2
2,736,243	-		LRK53_RS12330	0.18	-1.4
2,736,243	-		LRK53_RS12330	0.18	-0.4
2,736,243	-		LRK53_RS12330	0.18	-0.9
2,736,243	-		LRK53_RS12330	0.18	-0.7
2,736,243	-		LRK53_RS12330	0.18	-0.7
2,736,357	+		LRK53_RS12330	0.30	-0.5
2,736,358	-		LRK53_RS12330	0.30	-0.9
2,736,358	-		LRK53_RS12330	0.30	-0.9
2,736,358	-		LRK53_RS12330	0.30	+0.6
2,736,369	+		LRK53_RS12330	0.31	+0.3
2,736,370	-		LRK53_RS12330	0.31	+0.4
2,736,614	+		LRK53_RS12330	0.56	-0.1
2,736,615	-		LRK53_RS12330	0.56	-0.3
2,736,762	-		LRK53_RS12330	0.71	+0.2
2,736,875	+		LRK53_RS12330	0.83	-1.2
2,736,875	+		LRK53_RS12330	0.83	+1.2
2,736,875	+		LRK53_RS12330	0.83	-0.5
2,736,875	+		LRK53_RS12330	0.83	+0.5
2,736,875	+		LRK53_RS12330	0.83	-2.3
2,736,875	+		LRK53_RS12330	0.83	-0.4
2,736,875	+		LRK53_RS12330	0.83	+1.2
2,736,875	+		LRK53_RS12330	0.83	+1.2
2,736,875	+		LRK53_RS12330	0.83	-1.1
2,736,875	+		LRK53_RS12330	0.83	-0.3
2,736,875	+		LRK53_RS12330	0.83	+1.2
2,736,875	+		LRK53_RS12330	0.83	+0.8
2,736,875	+		LRK53_RS12330	0.83	-0.8
2,736,876	-		LRK53_RS12330	0.83	+0.1
2,736,876	-		LRK53_RS12330	0.83	-1.1
2,736,876	-		LRK53_RS12330	0.83	+0.5
2,736,876	-		LRK53_RS12330	0.83	+0.5
2,736,876	-		LRK53_RS12330	0.83	-0.5
2,736,876	-		LRK53_RS12330	0.83	+0.1
2,736,876	-		LRK53_RS12330	0.83	-0.3
2,736,876	-		LRK53_RS12330	0.83	-0.2
2,736,876	-		LRK53_RS12330	0.83	-0.5
2,736,876	-		LRK53_RS12330	0.83	-0.8
2,736,876	-		LRK53_RS12330	0.83	+0.1
2,736,876	-		LRK53_RS12330	0.83	-1.1
2,736,876	-		LRK53_RS12330	0.83	+0.5
2,736,876	-		LRK53_RS12330	0.83	+0.6
2,736,876	-		LRK53_RS12330	0.83	-0.8
2,736,876	-		LRK53_RS12330	0.83	+1.0
2,736,876	-		LRK53_RS12330	0.83	-0.3
2,736,876	-		LRK53_RS12330	0.83	-1.8
2,736,876	-		LRK53_RS12330	0.83	-0.5
2,736,876	-		LRK53_RS12330	0.83	-1.3
2,736,876	-		LRK53_RS12330	0.83	-0.2
2,736,932	+		LRK53_RS12330	0.88	+1.9
2,736,933	-		LRK53_RS12330	0.89	+0.1
2,736,991	+				+0.6
2,737,168	+		LRK53_RS12335	0.43	-0.1
2,737,168	+		LRK53_RS12335	0.43	+0.2
2,737,168	+		LRK53_RS12335	0.43	-0.8
2,737,168	+		LRK53_RS12335	0.43	+0.2
2,737,168	+		LRK53_RS12335	0.43	+0.1
2,737,168	+		LRK53_RS12335	0.43	+1.2
2,737,168	+		LRK53_RS12335	0.43	+0.1
2,737,168	+		LRK53_RS12335	0.43	+1.2
2,737,168	+		LRK53_RS12335	0.43	-0.3
2,737,169	-		LRK53_RS12335	0.44	+0.2
2,737,169	-		LRK53_RS12335	0.44	-0.4
2,737,169	-		LRK53_RS12335	0.44	+0.2
2,737,169	-		LRK53_RS12335	0.44	+1.4
2,737,169	-		LRK53_RS12335	0.44	+0.2
2,737,169	-		LRK53_RS12335	0.44	+0.5
2,737,169	-		LRK53_RS12335	0.44	+1.7
2,737,169	-		LRK53_RS12335	0.44	+0.2
2,737,169	-		LRK53_RS12335	0.44	+0.1
2,737,169	-		LRK53_RS12335	0.44	+0.2
2,737,185	+		LRK53_RS12335	0.48	-1.0
2,737,186	-		LRK53_RS12335	0.48	+2.2
2,737,186	-		LRK53_RS12335	0.48	-1.4
2,737,350	+				+0.2
2,737,350	+				-2.3
2,737,350	+				-0.7
2,737,351	-				-0.2
2,737,351	-				-1.1
2,737,351	-				-1.1
2,737,616	+				-0.8
2,737,616	+				+1.0
2,737,616	+				+0.2
2,737,616	+				-1.8
2,737,616	+				+0.1
2,737,616	+				-1.3
2,737,616	+				-0.2
2,737,616	+				-2.3
2,737,616	+				-0.7
2,737,616	+				+0.1
2,737,616	+				-2.5
2,737,616	+				-1.5
2,737,616	+				+0.8
2,737,617	-				+0.3
2,737,617	-				+0.1
2,737,617	-				+0.2
2,737,617	-				-0.2
2,737,617	-				-0.8
2,737,617	-				-1.4
2,737,617	-				+0.2
2,737,617	-				-2.1
2,737,617	-				+1.2
2,737,617	-				-0.0
2,737,617	-				-2.5
2,737,617	-				-0.4
2,737,617	-				-1.4
2,737,617	-				-2.9
2,737,617	-				-2.0
2,737,697	+				-0.4
2,737,698	-				+2.2
2,737,713	+				-1.8
2,737,714	-				+1.2
2,737,845	+		LRK53_RS12345	0.18	-1.7
2,737,845	+		LRK53_RS12345	0.18	-0.4
2,737,845	+		LRK53_RS12345	0.18	-0.0
2,737,845	+		LRK53_RS12345	0.18	-1.4
2,737,845	+		LRK53_RS12345	0.18	+0.2
2,737,845	+		LRK53_RS12345	0.18	-1.3
2,737,845	+		LRK53_RS12345	0.18	+1.0
2,737,845	+		LRK53_RS12345	0.18	-2.3
2,737,845	+		LRK53_RS12345	0.18	-0.8
2,737,845	+		LRK53_RS12345	0.18	+1.2
2,737,846	-		LRK53_RS12345	0.18	-2.3
2,737,846	-		LRK53_RS12345	0.18	+2.2
2,737,846	-		LRK53_RS12345	0.18	-0.1
2,737,846	-		LRK53_RS12345	0.18	-0.4
2,737,846	-		LRK53_RS12345	0.18	+2.2
2,737,846	-		LRK53_RS12345	0.18	-1.8
2,737,846	-		LRK53_RS12345	0.18	+0.3
2,737,846	-		LRK53_RS12345	0.18	-0.1
2,737,846	-		LRK53_RS12345	0.18	-2.2
2,737,846	-		LRK53_RS12345	0.18	-1.8
2,737,846	-		LRK53_RS12345	0.18	+0.2
2,737,846	-		LRK53_RS12345	0.18	+1.2
2,737,846	-		LRK53_RS12345	0.18	-0.4
2,737,846	-		LRK53_RS12345	0.18	-0.7
2,737,846	-		LRK53_RS12345	0.18	-1.0
2,737,846	-		LRK53_RS12345	0.18	+0.2
2,737,846	-		LRK53_RS12345	0.18	-0.8
2,737,846	-		LRK53_RS12345	0.18	-2.1
2,737,846	-		LRK53_RS12345	0.18	-1.1
2,737,846	-		LRK53_RS12345	0.18	-0.7
2,737,858	+		LRK53_RS12345	0.19	-0.8
2,737,858	+		LRK53_RS12345	0.19	-0.9
2,737,859	-		LRK53_RS12345	0.19	+0.1
2,737,859	-		LRK53_RS12345	0.19	-0.8
2,737,883	+		LRK53_RS12345	0.22	+1.2
2,737,883	+		LRK53_RS12345	0.22	-0.8
2,737,883	+		LRK53_RS12345	0.22	+0.1
2,737,883	+		LRK53_RS12345	0.22	+0.2
2,737,883	+		LRK53_RS12345	0.22	-0.2
2,737,883	+		LRK53_RS12345	0.22	+0.7
2,737,883	+		LRK53_RS12345	0.22	-1.5
2,737,883	+		LRK53_RS12345	0.22	+2.8
2,737,883	+		LRK53_RS12345	0.22	-0.6
2,737,883	+		LRK53_RS12345	0.22	-0.8
2,737,883	+		LRK53_RS12345	0.22	+0.3
2,737,883	+		LRK53_RS12345	0.22	-1.3
2,737,883	+		LRK53_RS12345	0.22	-0.0
2,737,883	+		LRK53_RS12345	0.22	-1.3
2,737,883	+		LRK53_RS12345	0.22	+0.6
2,737,884	-		LRK53_RS12345	0.22	-0.1
2,737,884	-		LRK53_RS12345	0.22	+0.2
2,737,884	-		LRK53_RS12345	0.22	+0.8
2,737,884	-		LRK53_RS12345	0.22	+1.2
2,737,884	-		LRK53_RS12345	0.22	-0.4
2,737,885	+		LRK53_RS12345	0.22	-0.8
2,737,885	+		LRK53_RS12345	0.22	-0.4
2,737,886	-		LRK53_RS12345	0.22	+1.2
2,737,886	-		LRK53_RS12345	0.22	+1.2
2,737,886	-		LRK53_RS12345	0.22	+0.2
2,737,886	-		LRK53_RS12345	0.22	-1.3