Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS11915

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
2,657,848	-				+0.2
2,657,848	-				-2.0
2,657,848	-				-0.2
2,657,848	-				-0.5
2,657,848	-				+0.9
2,657,848	-				-1.2
2,657,875	+				+0.1
2,657,875	+				-0.7
2,657,875	+				-0.2
2,657,876	-				-0.5
2,657,876	-				-1.2
2,657,876	-				+1.3
2,657,876	-				+0.9
2,657,876	-				-1.5
2,657,876	-				-0.5
2,657,876	-				+0.7
2,657,876	-				+1.3
2,657,876	-				-1.0
2,657,876	-				-1.8
2,657,878	+				-0.6
2,657,878	+				-1.7
2,657,878	+				-1.0
2,657,878	+				-0.1
2,657,879	-				-0.1
2,657,879	-				+1.3
2,657,938	-				-1.5
2,658,068	+				+1.3
2,658,068	+				-0.2
2,658,068	+				+0.0
2,658,068	+				-1.7
2,658,068	+				-1.2
2,658,068	+				+0.8
2,658,068	+				+0.8
2,658,068	+				+0.8
2,658,068	+				+0.8
2,658,068	+				-1.2
2,658,068	+				+1.8
2,658,068	+				+0.0
2,658,068	+				-0.7
2,658,068	+				+2.1
2,658,068	+				-2.0
2,658,068	+				+1.3
2,658,068	+				-0.5
2,658,068	+				+0.5
2,658,068	+				-0.5
2,658,422	+				+0.1
2,658,422	+				-0.3
2,658,422	+				-1.1
2,658,422	+				-0.2
2,658,422	+				-0.4
2,658,422	+				+1.3
2,658,423	-				+1.0
2,658,423	-				-0.3
2,658,423	-				-0.1
2,658,423	-				+0.9
2,658,423	-				+0.1
2,658,431	-				+2.3
2,658,520	+		LRK53_RS11915	0.38	-1.5
2,658,520	+		LRK53_RS11915	0.38	-1.2
2,658,520	+		LRK53_RS11915	0.38	+0.3
2,658,520	+		LRK53_RS11915	0.38	+2.3
2,658,520	+		LRK53_RS11915	0.38	-0.9
2,658,520	+		LRK53_RS11915	0.38	-0.7
2,658,521	-		LRK53_RS11915	0.39	+1.3
2,658,521	-		LRK53_RS11915	0.39	-1.0
2,658,521	-		LRK53_RS11915	0.39	+0.3
2,658,521	-		LRK53_RS11915	0.39	-1.5
2,658,521	-		LRK53_RS11915	0.39	-0.6
2,658,521	-		LRK53_RS11915	0.39	-1.8
2,658,633	+				+1.5
2,658,699	+				-0.2
2,658,700	-				-0.3
2,658,700	-				-1.2
2,658,739	+				-2.1
2,658,739	+				-1.2
2,658,739	+				-0.8
2,658,739	+				-0.2
2,658,739	+				-0.3
2,658,739	+				-2.0
2,658,739	+				+0.3
2,658,739	+				-1.7
2,658,739	+				-0.3
2,658,739	+				-0.7
2,658,739	+				-0.3
2,658,739	+				+0.9
2,658,739	+				+0.8
2,658,739	+				-1.0
2,658,739	+				+0.1
2,658,739	+				-0.8
2,658,740	-				+0.3
2,658,740	-				-1.7
2,658,740	-				-0.7
2,658,740	-				+0.1
2,658,740	-				-1.5
2,658,740	-				-1.5
2,658,740	-				+0.8
2,658,740	-				-1.3
2,658,740	-				-2.2
2,658,740	-				+2.3
2,658,740	-				-1.6
2,658,740	-				-0.9
2,658,740	-				+0.3
2,658,740	-				+0.9
2,658,745	+				-0.2
2,658,745	+				+0.3
2,658,745	+				+0.8
2,658,745	+				+0.4
2,658,745	+				+0.8
2,658,745	+				-1.3
2,658,745	+				-0.5
2,658,745	+				+2.3
2,658,745	+				+0.3
2,658,745	+				-1.4
2,658,745	+				-3.1
2,658,746	-				+2.1
2,658,746	-				+0.2
2,658,746	-				-0.5
2,658,746	-				-1.2
2,658,746	-				-0.9
2,658,746	-				-0.2
2,658,746	-				-0.9
2,658,746	-				-1.2
2,658,746	-				-1.0
2,658,746	-				-0.8
2,658,746	-				+0.6
2,658,746	-				-1.7
2,658,746	-				-1.8
2,658,746	-				+0.3
2,658,746	-				-0.2
2,658,746	-				-1.1
2,658,746	-				-0.8
2,658,746	-				-1.0
2,658,746	-				+1.3
2,658,746	-				-0.9
2,658,746	-				-0.2
2,658,746	-				+0.5
2,658,746	-				-0.7
2,658,746	-				-0.2
2,658,746	-				+0.7
2,658,746	-				-0.2
2,658,746	-				-0.2
2,658,746	-				+1.3
2,658,765	+				-0.7
2,658,765	+				-0.5
2,658,765	+				+2.6
2,658,766	-				-0.1
2,658,943	+		LRK53_RS11920	0.18	-1.5
2,658,943	+		LRK53_RS11920	0.18	+0.3
2,658,943	+		LRK53_RS11920	0.18	+0.7
2,658,943	+		LRK53_RS11920	0.18	-0.4
2,658,943	+		LRK53_RS11920	0.18	+0.5
2,658,943	+		LRK53_RS11920	0.18	+0.1
2,658,943	+		LRK53_RS11920	0.18	+1.7
2,658,943	+		LRK53_RS11920	0.18	-1.3
2,658,943	+		LRK53_RS11920	0.18	-1.0
2,658,943	+		LRK53_RS11920	0.18	-1.8
2,658,943	+		LRK53_RS11920	0.18	+0.9
2,658,943	+		LRK53_RS11920	0.18	-0.1
2,658,943	+		LRK53_RS11920	0.18	+1.7
2,658,943	+		LRK53_RS11920	0.18	-1.0
2,658,943	+		LRK53_RS11920	0.18	+1.9
2,658,943	+		LRK53_RS11920	0.18	+0.7
2,658,943	+		LRK53_RS11920	0.18	-0.7
2,658,943	+		LRK53_RS11920	0.18	-1.4
2,658,943	+		LRK53_RS11920	0.18	-0.7
2,658,944	-		LRK53_RS11920	0.18	-1.0
2,658,944	-		LRK53_RS11920	0.18	+0.1
2,658,944	-		LRK53_RS11920	0.18	+0.3
2,658,944	-		LRK53_RS11920	0.18	-1.1
2,658,944	-		LRK53_RS11920	0.18	-1.1
2,658,944	-		LRK53_RS11920	0.18	+0.3
2,658,944	-		LRK53_RS11920	0.18	+0.0
2,658,944	-		LRK53_RS11920	0.18	+0.3
2,658,944	-		LRK53_RS11920	0.18	-3.3
2,658,944	-		LRK53_RS11920	0.18	-0.5
2,658,944	-		LRK53_RS11920	0.18	-0.3
2,658,944	-		LRK53_RS11920	0.18	-0.7
2,658,944	-		LRK53_RS11920	0.18	-0.3
2,658,944	-		LRK53_RS11920	0.18	-2.3
2,658,969	+		LRK53_RS11920	0.22	-0.0
2,658,969	+		LRK53_RS11920	0.22	-0.7
2,658,970	-		LRK53_RS11920	0.22	-0.3
2,659,072	+		LRK53_RS11920	0.35	+1.9
2,659,072	+		LRK53_RS11920	0.35	-0.8
2,659,072	+		LRK53_RS11920	0.35	-1.3
2,659,073	-		LRK53_RS11920	0.35	-1.3
2,659,073	-		LRK53_RS11920	0.35	+0.7
2,659,073	-		LRK53_RS11920	0.35	+0.3
2,659,147	+		LRK53_RS11920	0.45	-1.8
2,659,147	+		LRK53_RS11920	0.45	+0.5
2,659,147	+		LRK53_RS11920	0.45	+0.7
2,659,147	+		LRK53_RS11920	0.45	-0.7
2,659,147	+		LRK53_RS11920	0.45	-2.1
2,659,147	+		LRK53_RS11920	0.45	-0.4
2,659,147	+		LRK53_RS11920	0.45	-0.9
2,659,148	-		LRK53_RS11920	0.45	-0.1
2,659,148	-		LRK53_RS11920	0.45	-0.3
2,659,198	+		LRK53_RS11920	0.52	+1.7
2,659,198	+		LRK53_RS11920	0.52	-1.3
2,659,198	+		LRK53_RS11920	0.52	+1.3
2,659,198	+		LRK53_RS11920	0.52	+1.3
2,659,198	+		LRK53_RS11920	0.52	-0.7
2,659,198	+		LRK53_RS11920	0.52	+1.7
2,659,198	+		LRK53_RS11920	0.52	+0.9
2,659,198	+		LRK53_RS11920	0.52	-0.8
2,659,198	+		LRK53_RS11920	0.52	+0.4
2,659,198	+		LRK53_RS11920	0.52	+0.3
2,659,198	+		LRK53_RS11920	0.52	-0.8
2,659,198	+		LRK53_RS11920	0.52	+0.2
2,659,198	+		LRK53_RS11920	0.52	+0.1
2,659,198	+		LRK53_RS11920	0.52	+0.1
2,659,198	+		LRK53_RS11920	0.52	-1.2
2,659,198	+		LRK53_RS11920	0.52	+0.3
2,659,198	+		LRK53_RS11920	0.52	-0.5
2,659,198	+		LRK53_RS11920	0.52	+0.9
2,659,199	-		LRK53_RS11920	0.52	-0.2
2,659,199	-		LRK53_RS11920	0.52	+1.8
2,659,199	-		LRK53_RS11920	0.52	-1.3
2,659,199	-		LRK53_RS11920	0.52	+1.1
2,659,199	-		LRK53_RS11920	0.52	-0.7
2,659,199	-		LRK53_RS11920	0.52	+0.6
2,659,199	-		LRK53_RS11920	0.52	-1.8
2,659,199	-		LRK53_RS11920	0.52	+1.9
2,659,199	-		LRK53_RS11920	0.52	-0.7
2,659,199	-		LRK53_RS11920	0.52	+1.3
2,659,222	+		LRK53_RS11920	0.55	-1.9
2,659,222	+		LRK53_RS11920	0.55	+0.0
2,659,222	+		LRK53_RS11920	0.55	-1.4
2,659,223	-		LRK53_RS11920	0.55	+1.8
2,659,223	-		LRK53_RS11920	0.55	+0.2
2,659,348	+		LRK53_RS11920	0.71	-0.5
2,659,348	+		LRK53_RS11920	0.71	-0.3
2,659,348	+		LRK53_RS11920	0.71	-0.3
2,659,349	-		LRK53_RS11920	0.72	-0.4
2,659,456	+		LRK53_RS11920	0.86	-0.8
2,659,457	-		LRK53_RS11920	0.86	-0.7
2,659,457	-		LRK53_RS11920	0.86	+0.1
2,659,508	-				-0.8
2,659,508	-				+0.1
2,659,508	-				+0.5