Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS11835

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
2,635,497	+		LRK53_RS11830	0.55	-0.2
2,635,497	+		LRK53_RS11830	0.55	+0.1
2,635,497	+		LRK53_RS11830	0.55	-0.1
2,635,498	-		LRK53_RS11830	0.55	-0.5
2,635,498	-		LRK53_RS11830	0.55	+0.2
2,635,535	+		LRK53_RS11830	0.57	-0.4
2,635,535	+		LRK53_RS11830	0.57	-1.0
2,635,536	-		LRK53_RS11830	0.57	+1.5
2,635,737	+		LRK53_RS11830	0.70	+0.2
2,635,737	+		LRK53_RS11830	0.70	-1.1
2,635,737	+		LRK53_RS11830	0.70	-0.9
2,635,737	+		LRK53_RS11830	0.70	-1.0
2,635,737	+		LRK53_RS11830	0.70	-0.1
2,635,737	+		LRK53_RS11830	0.70	-0.4
2,635,737	+		LRK53_RS11830	0.70	+0.6
2,635,737	+		LRK53_RS11830	0.70	-1.4
2,635,737	+		LRK53_RS11830	0.70	-1.4
2,635,737	+		LRK53_RS11830	0.70	-0.9
2,635,737	+		LRK53_RS11830	0.70	-0.4
2,635,737	+		LRK53_RS11830	0.70	-1.1
2,635,737	+		LRK53_RS11830	0.70	-0.4
2,635,737	+		LRK53_RS11830	0.70	-1.0
2,635,737	+		LRK53_RS11830	0.70	-0.1
2,635,738	-		LRK53_RS11830	0.70	-0.0
2,635,738	-		LRK53_RS11830	0.70	-2.1
2,635,738	-		LRK53_RS11830	0.70	+0.0
2,635,738	-		LRK53_RS11830	0.70	+0.4
2,635,738	-		LRK53_RS11830	0.70	+0.6
2,635,738	-		LRK53_RS11830	0.70	-0.7
2,635,738	-		LRK53_RS11830	0.70	-0.8
2,635,738	-		LRK53_RS11830	0.70	+1.2
2,635,738	-		LRK53_RS11830	0.70	-1.6
2,635,738	-		LRK53_RS11830	0.70	-0.8
2,635,738	-		LRK53_RS11830	0.70	-0.8
2,635,738	-		LRK53_RS11830	0.70	-0.8
2,635,738	-		LRK53_RS11830	0.70	-1.4
2,635,738	-		LRK53_RS11830	0.70	-0.6
2,635,738	-		LRK53_RS11830	0.70	-0.4
2,635,738	-		LRK53_RS11830	0.70	+0.3
2,635,738	-		LRK53_RS11830	0.70	-0.8
2,635,738	-		LRK53_RS11830	0.70	+0.6
2,635,738	-		LRK53_RS11830	0.70	-0.2
2,635,738	-		LRK53_RS11830	0.70	+0.2
2,635,749	+		LRK53_RS11830	0.70	-0.2
2,635,749	+		LRK53_RS11830	0.70	-1.3
2,635,749	+		LRK53_RS11830	0.70	-1.2
2,635,750	-		LRK53_RS11830	0.70	-0.5
2,635,750	-		LRK53_RS11830	0.70	-0.4
2,635,750	-		LRK53_RS11830	0.70	+0.0
2,635,750	-		LRK53_RS11830	0.70	-1.6
2,635,750	-		LRK53_RS11830	0.70	-1.0
2,635,758	+		LRK53_RS11830	0.71	-0.1
2,635,758	+		LRK53_RS11830	0.71	-0.7
2,635,759	-		LRK53_RS11830	0.71	+1.7
2,635,761	+		LRK53_RS11830	0.71	+1.2
2,635,761	+		LRK53_RS11830	0.71	-1.6
2,635,762	-		LRK53_RS11830	0.71	+1.8
2,635,762	-		LRK53_RS11830	0.71	+0.4
2,635,762	-		LRK53_RS11830	0.71	-2.1
2,636,013	+		LRK53_RS11830	0.86	-1.3
2,636,013	+		LRK53_RS11830	0.86	-0.8
2,636,013	+		LRK53_RS11830	0.86	+0.5
2,636,014	-		LRK53_RS11830	0.87	-1.3
2,636,014	-		LRK53_RS11830	0.87	-0.7
2,636,023	-		LRK53_RS11830	0.87	-1.1
2,636,133	+				-0.8
2,636,133	+				-0.8
2,636,133	+				-0.8
2,636,134	-				-0.4
2,636,134	-				-0.6
2,636,175	+				-0.4
2,636,175	+				-0.2
2,636,263	+				-0.4
2,636,263	+				-1.7
2,636,263	+				+0.2
2,636,263	+				-0.5
2,636,263	+				+0.3
2,636,263	+				-0.3
2,636,263	+				+0.6
2,636,263	+				-1.4
2,636,263	+				+0.7
2,636,263	+				-1.0
2,636,263	+				-0.1
2,636,264	-				-0.7
2,636,264	-				-1.7
2,636,264	-				+0.3
2,636,264	-				+0.6
2,636,264	-				-0.0
2,636,264	-				-0.8
2,636,264	-				+0.5
2,636,264	-				+0.3
2,636,264	-				-1.4
2,636,264	-				-0.7
2,636,264	-				+1.0
2,636,269	+				-0.0
2,636,269	+				+2.8
2,636,269	+				-0.2
2,636,269	+				+0.1
2,636,270	-				-0.8
2,636,270	-				+1.5
2,636,270	-				-0.8
2,636,270	-				+0.2
2,636,272	+				+0.6
2,636,272	+				-0.1
2,636,272	+				+0.2
2,636,272	+				-0.3
2,636,273	-				-0.8
2,636,273	-				+1.2
2,636,273	-				-0.4
2,636,273	-				-1.0
2,636,273	-				+2.2
2,636,273	-				-2.1
2,636,273	-				+1.5
2,636,273	-				-2.4
2,636,273	-				-0.6
2,636,273	-				-0.0
2,636,326	+				-0.7
2,636,326	+				+0.1
2,636,326	+				-0.3
2,636,326	+				-0.8
2,636,326	+				-0.7
2,636,326	+				+0.1
2,636,326	+				+1.0
2,636,327	-				-0.0
2,636,327	-				-1.6
2,636,327	-				+0.2
2,636,327	-				+1.8
2,636,327	-				+0.7
2,636,327	-				-1.0
2,636,327	-				+1.5
2,636,651	-		LRK53_RS11835	0.28	-0.0
2,636,659	+		LRK53_RS11835	0.29	+3.2
2,636,659	+		LRK53_RS11835	0.29	+0.5
2,636,659	+		LRK53_RS11835	0.29	+2.5
2,636,659	+		LRK53_RS11835	0.29	+0.7
2,637,079	+		LRK53_RS11835	0.58	-1.8
2,637,079	+		LRK53_RS11835	0.58	-2.4
2,637,080	-		LRK53_RS11835	0.58	+1.7
2,637,080	-		LRK53_RS11835	0.58	-0.4
2,637,080	-		LRK53_RS11835	0.58	+1.2
2,637,080	-		LRK53_RS11835	0.58	-0.6
2,637,118	+		LRK53_RS11835	0.61	+0.6
2,637,118	+		LRK53_RS11835	0.61	-1.6
2,637,118	+		LRK53_RS11835	0.61	-0.3
2,637,118	+		LRK53_RS11835	0.61	-0.1
2,637,118	+		LRK53_RS11835	0.61	+0.3
2,637,119	-		LRK53_RS11835	0.61	+0.2
2,637,119	-		LRK53_RS11835	0.61	+2.0
2,637,119	-		LRK53_RS11835	0.61	-2.0
2,637,119	-		LRK53_RS11835	0.61	-0.5
2,637,119	-		LRK53_RS11835	0.61	+2.8
2,637,136	+		LRK53_RS11835	0.62	-1.1
2,637,136	+		LRK53_RS11835	0.62	+2.3
2,637,209	+		LRK53_RS11835	0.67	-0.0
2,637,209	+		LRK53_RS11835	0.67	-0.5
2,637,209	+		LRK53_RS11835	0.67	+0.2
2,637,209	+		LRK53_RS11835	0.67	-2.4
2,637,209	+		LRK53_RS11835	0.67	-0.4
2,637,209	+		LRK53_RS11835	0.67	-0.4
2,637,209	+		LRK53_RS11835	0.67	+0.6
2,637,209	+		LRK53_RS11835	0.67	+0.6
2,637,209	+		LRK53_RS11835	0.67	-0.5
2,637,209	+		LRK53_RS11835	0.67	-1.2
2,637,209	+		LRK53_RS11835	0.67	-0.8
2,637,210	-		LRK53_RS11835	0.67	+1.2
2,637,210	-		LRK53_RS11835	0.67	+1.2
2,637,210	-		LRK53_RS11835	0.67	-0.5
2,637,210	-		LRK53_RS11835	0.67	-0.6
2,637,210	-		LRK53_RS11835	0.67	-2.4
2,637,210	-		LRK53_RS11835	0.67	-0.9
2,637,210	-		LRK53_RS11835	0.67	+1.6
2,637,581	-				-0.8
2,637,702	-				-1.4
2,637,702	-				-0.6
2,637,818	+				+0.3
2,637,818	+				+1.4
2,637,818	+				-0.8
2,637,819	-				+0.0
2,637,819	-				-0.4
2,637,819	-				+0.9
2,637,819	-				-0.4
2,637,819	-				+1.6
2,637,866	+				-0.6
2,637,866	+				+0.2
2,637,866	+				-0.1
2,637,866	+				+0.2
2,637,866	+				-1.7
2,637,866	+				+0.1
2,637,866	+				-0.7
2,637,866	+				-1.6
2,637,867	-				+1.2
2,637,867	-				+0.2
2,637,867	-				+0.2
2,637,867	-				-0.9
2,637,867	-				-2.0
2,637,867	-				-3.1
2,637,867	-				+2.2
2,637,867	-				-1.1
2,637,893	+		LRK53_RS11840	0.11	-0.3
2,637,893	+		LRK53_RS11840	0.11	-0.8
2,637,894	-		LRK53_RS11840	0.11	+0.3
2,637,894	-		LRK53_RS11840	0.11	-0.4
2,637,929	+		LRK53_RS11840	0.16	+0.1
2,637,929	+		LRK53_RS11840	0.16	+0.5
2,637,929	+		LRK53_RS11840	0.16	-2.1
2,637,929	+		LRK53_RS11840	0.16	+1.9
2,637,929	+		LRK53_RS11840	0.16	+0.6
2,637,929	+		LRK53_RS11840	0.16	-1.1
2,637,930	-		LRK53_RS11840	0.16	-1.0
2,637,930	-		LRK53_RS11840	0.16	+0.6
2,637,930	-		LRK53_RS11840	0.16	-2.0
2,637,930	-		LRK53_RS11840	0.16	-1.1
2,637,930	-		LRK53_RS11840	0.16	-0.1
2,638,010	+		LRK53_RS11840	0.27	-0.7
2,638,010	+		LRK53_RS11840	0.27	+1.2
2,638,010	+		LRK53_RS11840	0.27	+1.2
2,638,010	+		LRK53_RS11840	0.27	+0.4
2,638,011	-		LRK53_RS11840	0.27	-1.1
2,638,011	-		LRK53_RS11840	0.27	+0.6
2,638,034	+		LRK53_RS11840	0.30	-0.8
2,638,034	+		LRK53_RS11840	0.30	-1.9
2,638,034	+		LRK53_RS11840	0.30	-1.2
2,638,035	-		LRK53_RS11840	0.30	-1.1
2,638,035	-		LRK53_RS11840	0.30	-1.4
2,638,070	+		LRK53_RS11840	0.35	-1.6
2,638,070	+		LRK53_RS11840	0.35	+0.7
2,638,070	+		LRK53_RS11840	0.35	+0.5
2,638,070	+		LRK53_RS11840	0.35	-0.2
2,638,070	+		LRK53_RS11840	0.35	+1.2
2,638,071	-		LRK53_RS11840	0.35	-0.5
2,638,071	-		LRK53_RS11840	0.35	-0.5
2,638,071	-		LRK53_RS11840	0.35	-0.5
2,638,071	-		LRK53_RS11840	0.35	-2.0
2,638,071	-		LRK53_RS11840	0.35	+1.2
2,638,113	+		LRK53_RS11840	0.41	-1.6
2,638,113	+		LRK53_RS11840	0.41	+0.7
2,638,113	+		LRK53_RS11840	0.41	-0.4
2,638,113	+		LRK53_RS11840	0.41	+0.1
2,638,113	+		LRK53_RS11840	0.41	+0.2
2,638,113	+		LRK53_RS11840	0.41	-0.4
2,638,113	+		LRK53_RS11840	0.41	-1.6
2,638,113	+		LRK53_RS11840	0.41	-1.0
2,638,114	-		LRK53_RS11840	0.41	-2.3
2,638,114	-		LRK53_RS11840	0.41	-0.7
2,638,114	-		LRK53_RS11840	0.41	+2.5
2,638,114	-		LRK53_RS11840	0.41	-0.3
2,638,114	-		LRK53_RS11840	0.41	+0.5
2,638,114	-		LRK53_RS11840	0.41	-1.1
2,638,114	-		LRK53_RS11840	0.41	-0.4
2,638,114	-		LRK53_RS11840	0.41	-2.1
2,638,114	-		LRK53_RS11840	0.41	+0.9
2,638,114	-		LRK53_RS11840	0.41	-0.8
2,638,114	-		LRK53_RS11840	0.41	-1.6
2,638,114	-		LRK53_RS11840	0.41	-0.4
2,638,114	-		LRK53_RS11840	0.41	+1.0
2,638,114	-		LRK53_RS11840	0.41	+0.8
2,638,271	+		LRK53_RS11840	0.63	+0.9
2,638,272	-		LRK53_RS11840	0.63	-0.1
2,638,302	-		LRK53_RS11840	0.67	-0.3
2,638,302	-		LRK53_RS11840	0.67	-0.7
2,638,618	-				-0.1
2,638,618	-				+1.0
2,638,618	-				-1.4
2,638,618	-				-1.1
2,638,618	-				-0.5