Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS11460

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
2,549,714	+		LRK53_RS11450	0.55	-0.2
2,549,714	+		LRK53_RS11450	0.55	-1.1
2,549,714	+		LRK53_RS11450	0.55	-0.1
2,549,714	+		LRK53_RS11450	0.55	-0.4
2,549,714	+		LRK53_RS11450	0.55	-1.1
2,549,714	+		LRK53_RS11450	0.55	+0.2
2,549,714	+		LRK53_RS11450	0.55	+0.2
2,549,714	+		LRK53_RS11450	0.55	-0.9
2,549,714	+		LRK53_RS11450	0.55	-1.5
2,549,715	-		LRK53_RS11450	0.56	-1.5
2,549,715	-		LRK53_RS11450	0.56	+0.2
2,549,715	-		LRK53_RS11450	0.56	-0.4
2,549,715	-		LRK53_RS11450	0.56	-1.7
2,549,715	-		LRK53_RS11450	0.56	+0.3
2,549,715	-		LRK53_RS11450	0.56	+0.6
2,549,715	-		LRK53_RS11450	0.56	-0.0
2,549,725	+		LRK53_RS11450	0.58	-0.5
2,549,725	+		LRK53_RS11450	0.58	+0.2
2,549,725	+		LRK53_RS11450	0.58	+0.8
2,549,725	+		LRK53_RS11450	0.58	-0.4
2,549,725	+		LRK53_RS11450	0.58	-1.4
2,549,725	+		LRK53_RS11450	0.58	-0.1
2,549,725	+		LRK53_RS11450	0.58	-1.6
2,549,725	+		LRK53_RS11450	0.58	-0.6
2,549,725	+		LRK53_RS11450	0.58	-0.0
2,549,725	+		LRK53_RS11450	0.58	+0.0
2,549,725	+		LRK53_RS11450	0.58	-1.0
2,549,725	+		LRK53_RS11450	0.58	-0.3
2,549,725	+		LRK53_RS11450	0.58	-1.2
2,549,725	+		LRK53_RS11450	0.58	-1.3
2,549,725	+		LRK53_RS11450	0.58	+0.6
2,549,725	+		LRK53_RS11450	0.58	+0.5
2,549,725	+		LRK53_RS11450	0.58	-1.0
2,549,725	+		LRK53_RS11450	0.58	-0.4
2,549,725	+		LRK53_RS11450	0.58	-0.6
2,549,725	+		LRK53_RS11450	0.58	-2.2
2,549,725	+		LRK53_RS11450	0.58	-1.6
2,549,725	+		LRK53_RS11450	0.58	+0.2
2,549,725	+		LRK53_RS11450	0.58	+1.1
2,549,725	+		LRK53_RS11450	0.58	-0.8
2,549,725	+		LRK53_RS11450	0.58	-1.3
2,549,725	+		LRK53_RS11450	0.58	+0.8
2,549,726	-		LRK53_RS11450	0.59	+1.6
2,549,726	-		LRK53_RS11450	0.59	+0.2
2,549,726	-		LRK53_RS11450	0.59	+0.2
2,549,726	-		LRK53_RS11450	0.59	-2.8
2,549,726	-		LRK53_RS11450	0.59	-0.0
2,549,726	-		LRK53_RS11450	0.59	+0.5
2,549,726	-		LRK53_RS11450	0.59	-0.6
2,549,726	-		LRK53_RS11450	0.59	+0.1
2,549,726	-		LRK53_RS11450	0.59	+0.8
2,549,726	-		LRK53_RS11450	0.59	-1.1
2,549,726	-		LRK53_RS11450	0.59	-0.4
2,549,726	-		LRK53_RS11450	0.59	-2.4
2,549,726	-		LRK53_RS11450	0.59	+2.5
2,549,726	-		LRK53_RS11450	0.59	-1.4
2,549,726	-		LRK53_RS11450	0.59	+1.2
2,549,726	-		LRK53_RS11450	0.59	-0.8
2,549,726	-		LRK53_RS11450	0.59	-0.0
2,549,726	-		LRK53_RS11450	0.59	-2.0
2,549,726	-		LRK53_RS11450	0.59	-0.4
2,549,726	-		LRK53_RS11450	0.59	-0.6
2,549,726	-		LRK53_RS11450	0.59	-2.0
2,549,726	-		LRK53_RS11450	0.59	+0.1
2,549,726	-		LRK53_RS11450	0.59	+0.2
2,549,726	-		LRK53_RS11450	0.59	+0.1
2,549,809	+		LRK53_RS11450	0.82	-0.3
2,549,809	+		LRK53_RS11450	0.82	-0.8
2,549,809	+		LRK53_RS11450	0.82	-0.5
2,549,809	+		LRK53_RS11450	0.82	-0.8
2,549,809	+		LRK53_RS11450	0.82	-2.6
2,549,809	+		LRK53_RS11450	0.82	-0.3
2,549,809	+		LRK53_RS11450	0.82	-0.1
2,549,809	+		LRK53_RS11450	0.82	-0.7
2,549,809	+		LRK53_RS11450	0.82	-0.4
2,549,809	+		LRK53_RS11450	0.82	-1.4
2,549,809	+		LRK53_RS11450	0.82	-1.2
2,549,809	+		LRK53_RS11450	0.82	+0.3
2,549,809	+		LRK53_RS11450	0.82	+0.3
2,549,809	+		LRK53_RS11450	0.82	+0.2
2,549,809	+		LRK53_RS11450	0.82	-0.4
2,549,809	+		LRK53_RS11450	0.82	-0.6
2,549,809	+		LRK53_RS11450	0.82	-0.0
2,549,809	+		LRK53_RS11450	0.82	-0.4
2,549,810	-		LRK53_RS11450	0.82	-1.5
2,549,810	-		LRK53_RS11450	0.82	-1.2
2,549,810	-		LRK53_RS11450	0.82	-1.5
2,549,810	-		LRK53_RS11450	0.82	-0.8
2,549,810	-		LRK53_RS11450	0.82	+0.4
2,549,810	-		LRK53_RS11450	0.82	+0.3
2,549,810	-		LRK53_RS11450	0.82	-0.4
2,549,810	-		LRK53_RS11450	0.82	-1.1
2,549,810	-		LRK53_RS11450	0.82	-0.6
2,549,810	-		LRK53_RS11450	0.82	+0.6
2,549,810	-		LRK53_RS11450	0.82	-0.0
2,549,810	-		LRK53_RS11450	0.82	-0.6
2,549,810	-		LRK53_RS11450	0.82	-0.7
2,549,810	-		LRK53_RS11450	0.82	-1.6
2,549,810	-		LRK53_RS11450	0.82	+0.1
2,549,810	-		LRK53_RS11450	0.82	-0.5
2,549,810	-		LRK53_RS11450	0.82	-2.4
2,549,810	-		LRK53_RS11450	0.82	-0.0
2,549,810	-		LRK53_RS11450	0.82	+0.2
2,549,810	-		LRK53_RS11450	0.82	-1.0
2,549,810	-		LRK53_RS11450	0.82	-0.4
2,549,810	-		LRK53_RS11450	0.82	-1.5
2,549,869	+				-1.1
2,549,869	+				-1.4
2,549,869	+				+0.2
2,549,869	+				-0.3
2,549,869	+				-1.1
2,549,870	-				-0.7
2,549,870	-				+2.8
2,549,870	-				-0.7
2,549,870	-				-0.7
2,549,870	-				-0.1
2,549,870	-				+1.0
2,549,870	-				-0.0
2,549,870	-				-0.6
2,549,870	-				+1.2
2,549,870	-				+3.2
2,549,878	+				-0.7
2,549,879	-				+0.2
2,549,879	-				-0.1
2,549,879	-				-0.4
2,549,879	-				+2.0
2,549,982	+				-0.1
2,549,982	+				+0.4
2,549,982	+				+0.6
2,549,982	+				+0.0
2,549,982	+				+1.5
2,549,982	+				+0.1
2,549,982	+				+0.2
2,549,982	+				-1.6
2,549,982	+				+0.1
2,549,982	+				-0.4
2,549,982	+				+1.4
2,549,982	+				-0.5
2,549,982	+				+0.3
2,549,982	+				-0.4
2,549,982	+				+0.0
2,549,982	+				+1.6
2,549,982	+				-0.4
2,549,982	+				+0.0
2,549,982	+				-0.8
2,549,983	-				-0.3
2,549,983	-				-2.7
2,549,983	-				-0.7
2,549,983	-				-0.4
2,549,983	-				-0.9
2,549,983	-				-0.9
2,549,983	-				-0.1
2,549,983	-				+0.0
2,549,983	-				-0.4
2,549,983	-				-0.3
2,549,983	-				-1.0
2,549,983	-				-1.2
2,549,983	-				-0.5
2,549,983	-				-2.0
2,549,983	-				+0.2
2,549,983	-				-0.4
2,549,985	+				-0.8
2,549,985	+				-1.4
2,549,985	+				-1.8
2,549,985	+				-0.8
2,549,985	+				-0.3
2,549,985	+				-0.3
2,549,985	+				-2.4
2,549,985	+				+0.6
2,549,985	+				-0.4
2,549,986	-				-1.4
2,549,986	-				+1.2
2,549,986	-				-0.6
2,549,986	-				+0.3
2,549,986	-				+0.2
2,549,986	-				-0.2
2,549,986	-				-0.8
2,549,986	-				+0.3
2,549,986	-				-1.0
2,549,986	-				-1.4
2,549,986	-				-1.9
2,550,216	+		LRK53_RS11455	0.44	-3.5
2,550,216	+		LRK53_RS11455	0.44	-0.6
2,550,216	+		LRK53_RS11455	0.44	-2.3
2,550,217	-		LRK53_RS11455	0.44	-0.2
2,550,217	-		LRK53_RS11455	0.44	-0.6
2,550,217	-		LRK53_RS11455	0.44	-1.8
2,550,217	-		LRK53_RS11455	0.44	+0.8
2,550,284	-		LRK53_RS11455	0.55	-0.2
2,550,570	+				-0.2
2,550,610	+				-0.4
2,550,615	+				-1.1
2,550,633	+				+0.6
2,550,633	+				+0.6
2,550,633	+				-1.1
2,550,633	+				-0.5
2,550,634	-				-0.8
2,550,634	-				+2.2
2,550,634	-				+1.6
2,550,634	-				-0.4
2,550,763	+		LRK53_RS11460	0.16	-0.3
2,550,763	+		LRK53_RS11460	0.16	-2.3
2,550,763	+		LRK53_RS11460	0.16	-1.2
2,550,763	+		LRK53_RS11460	0.16	-1.6
2,550,763	+		LRK53_RS11460	0.16	-0.7
2,550,763	+		LRK53_RS11460	0.16	-0.4
2,550,763	+		LRK53_RS11460	0.16	-0.0
2,550,763	+		LRK53_RS11460	0.16	-0.3
2,550,763	+		LRK53_RS11460	0.16	-0.5
2,550,763	+		LRK53_RS11460	0.16	+0.9
2,550,763	+		LRK53_RS11460	0.16	+0.8
2,550,764	-		LRK53_RS11460	0.16	-0.0
2,550,764	-		LRK53_RS11460	0.16	-0.4
2,550,764	-		LRK53_RS11460	0.16	-1.0
2,550,764	-		LRK53_RS11460	0.16	-0.3
2,550,764	-		LRK53_RS11460	0.16	-0.6
2,550,764	-		LRK53_RS11460	0.16	-1.4
2,550,764	-		LRK53_RS11460	0.16	-1.1
2,550,764	-		LRK53_RS11460	0.16	-0.4
2,550,764	-		LRK53_RS11460	0.16	-0.5
2,550,764	-		LRK53_RS11460	0.16	-0.4
2,550,764	-		LRK53_RS11460	0.16	+0.9
2,550,764	-		LRK53_RS11460	0.16	-0.3
2,550,764	-		LRK53_RS11460	0.16	-1.4
2,550,764	-		LRK53_RS11460	0.16	+0.4
2,550,764	-		LRK53_RS11460	0.16	+0.2
2,550,764	-		LRK53_RS11460	0.16	-0.1
2,550,764	-		LRK53_RS11460	0.16	-1.6
2,550,764	-		LRK53_RS11460	0.16	-1.4
2,550,764	-		LRK53_RS11460	0.16	-1.1
2,550,764	-		LRK53_RS11460	0.16	-2.0
2,550,834	+		LRK53_RS11460	0.37	-1.6
2,550,834	+		LRK53_RS11460	0.37	-0.8
2,550,834	+		LRK53_RS11460	0.37	-2.3
2,550,968	+		LRK53_RS11460	0.76	-2.0
2,550,968	+		LRK53_RS11460	0.76	-2.4
2,550,968	+		LRK53_RS11460	0.76	-1.0
2,550,968	+		LRK53_RS11460	0.76	+0.6
2,550,968	+		LRK53_RS11460	0.76	-1.1
2,550,968	+		LRK53_RS11460	0.76	+1.6
2,550,968	+		LRK53_RS11460	0.76	+1.2
2,550,968	+		LRK53_RS11460	0.76	-0.8
2,550,969	-		LRK53_RS11460	0.76	-1.3
2,550,969	-		LRK53_RS11460	0.76	+0.8
2,550,969	-		LRK53_RS11460	0.76	-1.6
2,550,969	-		LRK53_RS11460	0.76	+0.7
2,550,969	-		LRK53_RS11460	0.76	-0.6
2,550,969	-		LRK53_RS11460	0.76	-0.7
2,550,969	-		LRK53_RS11460	0.76	-0.1
2,550,969	-		LRK53_RS11460	0.76	+1.2
2,550,969	-		LRK53_RS11460	0.76	-0.2
2,551,515	-		LRK53_RS11465	0.51	-0.4
2,551,920	-				-1.8
2,552,011	+				-0.8
2,552,011	+				+0.4