Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS11405

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
2,542,698	+		LRK53_RS11400	0.49	+1.2
2,542,735	+		LRK53_RS11400	0.51	-1.6
2,542,736	-		LRK53_RS11400	0.51	-1.6
2,542,736	-		LRK53_RS11400	0.51	+1.2
2,542,945	+		LRK53_RS11400	0.64	+0.4
2,542,945	+		LRK53_RS11400	0.64	-0.4
2,542,945	+		LRK53_RS11400	0.64	-0.0
2,542,945	+		LRK53_RS11400	0.64	-0.4
2,542,945	+		LRK53_RS11400	0.64	-2.1
2,542,945	+		LRK53_RS11400	0.64	-0.9
2,542,945	+		LRK53_RS11400	0.64	-1.1
2,542,945	+		LRK53_RS11400	0.64	-2.3
2,542,945	+		LRK53_RS11400	0.64	+0.8
2,542,946	-		LRK53_RS11400	0.64	-0.6
2,542,946	-		LRK53_RS11400	0.64	+0.0
2,543,610	+				-1.6
2,543,610	+				-0.4
2,543,611	-				+0.2
2,543,611	-				+2.8
2,543,611	-				-1.6
2,543,667	+		LRK53_RS11405	0.16	-0.1
2,543,667	+		LRK53_RS11405	0.16	-0.7
2,543,667	+		LRK53_RS11405	0.16	+0.2
2,543,667	+		LRK53_RS11405	0.16	-0.1
2,543,667	+		LRK53_RS11405	0.16	-2.1
2,543,667	+		LRK53_RS11405	0.16	-0.2
2,543,667	+		LRK53_RS11405	0.16	-0.0
2,543,667	+		LRK53_RS11405	0.16	+1.2
2,543,667	+		LRK53_RS11405	0.16	+1.2
2,543,667	+		LRK53_RS11405	0.16	-1.1
2,543,667	+		LRK53_RS11405	0.16	+0.5
2,543,668	-		LRK53_RS11405	0.16	-2.0
2,543,668	-		LRK53_RS11405	0.16	-0.8
2,543,668	-		LRK53_RS11405	0.16	-2.3
2,543,668	-		LRK53_RS11405	0.16	-0.2
2,543,668	-		LRK53_RS11405	0.16	+1.0
2,543,668	-		LRK53_RS11405	0.16	-0.3
2,543,668	-		LRK53_RS11405	0.16	-1.3
2,543,668	-		LRK53_RS11405	0.16	-1.4
2,543,668	-		LRK53_RS11405	0.16	+0.9
2,543,668	-		LRK53_RS11405	0.16	-0.4
2,543,668	-		LRK53_RS11405	0.16	+0.8
2,543,668	-		LRK53_RS11405	0.16	+0.6
2,543,668	-		LRK53_RS11405	0.16	-2.3
2,543,668	-		LRK53_RS11405	0.16	+0.3
2,543,668	-		LRK53_RS11405	0.16	-1.0
2,543,668	-		LRK53_RS11405	0.16	+0.8
2,543,668	-		LRK53_RS11405	0.16	+1.2
2,543,741	+		LRK53_RS11405	0.27	-1.6
2,543,741	+		LRK53_RS11405	0.27	-0.5
2,543,741	+		LRK53_RS11405	0.27	+1.2
2,543,741	+		LRK53_RS11405	0.27	-0.4
2,543,741	+		LRK53_RS11405	0.27	-1.6
2,543,741	+		LRK53_RS11405	0.27	+0.2
2,543,742	-		LRK53_RS11405	0.28	-1.9
2,543,742	-		LRK53_RS11405	0.28	-0.8
2,543,742	-		LRK53_RS11405	0.28	-1.8
2,543,742	-		LRK53_RS11405	0.28	-0.4
2,543,742	-		LRK53_RS11405	0.28	+0.8
2,543,742	-		LRK53_RS11405	0.28	-1.4
2,543,901	+		LRK53_RS11405	0.53	-0.7
2,543,901	+		LRK53_RS11405	0.53	-1.1
2,543,901	+		LRK53_RS11405	0.53	-1.3
2,543,901	+		LRK53_RS11405	0.53	-1.0
2,543,901	+		LRK53_RS11405	0.53	+0.6
2,543,902	-		LRK53_RS11405	0.53	+1.2
2,543,937	+		LRK53_RS11405	0.58	+0.8
2,543,937	+		LRK53_RS11405	0.58	+0.4
2,543,937	+		LRK53_RS11405	0.58	-1.1
2,543,937	+		LRK53_RS11405	0.58	-1.1
2,543,937	+		LRK53_RS11405	0.58	-1.6
2,543,937	+		LRK53_RS11405	0.58	-1.7
2,543,937	+		LRK53_RS11405	0.58	+0.3
2,543,937	+		LRK53_RS11405	0.58	-0.5
2,543,937	+		LRK53_RS11405	0.58	-1.1
2,543,937	+		LRK53_RS11405	0.58	-1.1
2,543,937	+		LRK53_RS11405	0.58	-0.9
2,543,937	+		LRK53_RS11405	0.58	-1.8
2,543,938	-		LRK53_RS11405	0.58	-0.2
2,543,938	-		LRK53_RS11405	0.58	-0.7
2,543,938	-		LRK53_RS11405	0.58	-1.0
2,543,938	-		LRK53_RS11405	0.58	+0.2
2,543,938	-		LRK53_RS11405	0.58	-1.2
2,543,938	-		LRK53_RS11405	0.58	-0.3
2,543,938	-		LRK53_RS11405	0.58	-1.8
2,543,938	-		LRK53_RS11405	0.58	+0.6
2,543,938	-		LRK53_RS11405	0.58	-0.4
2,543,938	-		LRK53_RS11405	0.58	-1.0
2,543,938	-		LRK53_RS11405	0.58	+2.2
2,543,938	-		LRK53_RS11405	0.58	-1.7
2,543,938	-		LRK53_RS11405	0.58	-0.6
2,543,938	-		LRK53_RS11405	0.58	-0.5
2,543,938	-		LRK53_RS11405	0.58	-1.0
2,543,938	-		LRK53_RS11405	0.58	-1.0
2,543,938	-		LRK53_RS11405	0.58	+0.2
2,543,938	-		LRK53_RS11405	0.58	-2.0
2,543,938	-		LRK53_RS11405	0.58	-1.0
2,544,198	+				-0.3
2,544,198	+				+1.2
2,544,198	+				-0.0
2,544,198	+				-1.9
2,544,198	+				-1.4
2,544,198	+				-1.0
2,544,198	+				-1.2
2,544,198	+				-0.8
2,544,198	+				+0.8
2,544,198	+				-1.7
2,544,198	+				-2.5
2,544,198	+				-1.0
2,544,198	+				-0.6
2,544,198	+				-1.8
2,544,198	+				+0.3
2,544,198	+				+0.1
2,544,199	-				+1.2
2,544,199	-				+1.2
2,544,199	-				+2.2
2,544,199	-				-1.5
2,544,199	-				-0.3
2,544,199	-				-0.4
2,544,199	-				-2.3
2,544,199	-				-0.4
2,544,199	-				-2.0
2,544,199	-				-1.1
2,544,199	-				-0.8
2,544,199	-				+0.0
2,544,199	-				-2.0
2,544,199	-				-2.1
2,544,199	-				-0.4
2,544,199	-				-0.4
2,544,199	-				+0.5
2,544,199	-				-1.7
2,544,199	-				-1.6
2,544,199	-				-1.4
2,544,199	-				+0.2
2,544,199	-				+0.8
2,544,199	-				-0.8
2,544,199	-				-0.4
2,544,208	+				-0.9
2,544,208	+				-1.6
2,544,208	+				-0.5
2,544,208	+				+0.5
2,544,208	+				+1.5
2,544,209	-				-1.2
2,544,209	-				-2.4
2,544,209	-				-1.1
2,544,209	-				-0.6
2,544,209	-				+2.2
2,544,213	+				+0.2
2,544,213	+				-0.3
2,544,213	+				-0.3
2,544,214	-				+0.8
2,544,214	-				-0.7
2,544,214	-				-0.4
2,544,283	+				-2.3
2,544,283	+				-2.8
2,544,283	+				+1.2
2,544,283	+				-0.6
2,544,283	+				-0.8
2,544,283	+				+0.0
2,544,283	+				-1.1
2,544,283	+				-1.1
2,544,283	+				+1.2
2,544,283	+				-2.8
2,544,283	+				-1.1
2,544,283	+				+0.8
2,544,283	+				+0.1
2,544,283	+				+0.2
2,544,283	+				+1.1
2,544,283	+				+0.4
2,544,283	+				-2.1
2,544,283	+				-0.8
2,544,283	+				+1.9
2,544,283	+				-2.7
2,544,283	+				+1.2
2,544,283	+				-0.4
2,544,283	+				+1.2
2,544,284	-				-1.4
2,544,284	-				+0.6
2,544,284	-				-0.8
2,544,284	-				-1.6
2,544,284	-				-2.3
2,544,284	-				-0.4
2,544,284	-				+0.5
2,544,284	-				+2.8
2,544,284	-				+0.2
2,544,284	-				+1.2
2,544,284	-				+0.4
2,544,284	-				-0.4
2,544,284	-				+1.2
2,544,284	-				+1.9
2,544,284	-				-0.6
2,544,284	-				-2.1
2,544,284	-				+3.5
2,544,284	-				-2.8
2,544,284	-				-0.6
2,544,284	-				-0.7
2,544,284	-				-0.4
2,544,284	-				-0.5
2,544,284	-				-1.6
2,544,284	-				+0.2
2,544,284	-				+1.9
2,544,284	-				+0.6
2,544,284	-				+0.2
2,544,311	+				-0.4
2,544,311	+				+0.1
2,544,311	+				-0.3
2,544,349	+				-1.3
2,544,350	-				-2.3
2,544,392	-				-1.0
2,544,392	-				-2.0
2,544,407	-				-0.6
2,544,448	+				-1.1
2,544,587	+		LRK53_RS11410	0.18	-1.4
2,544,587	+		LRK53_RS11410	0.18	+1.4
2,544,587	+		LRK53_RS11410	0.18	+1.2
2,544,587	+		LRK53_RS11410	0.18	-0.8
2,544,588	-		LRK53_RS11410	0.18	-0.0
2,544,588	-		LRK53_RS11410	0.18	-1.1
2,544,683	+		LRK53_RS11410	0.24	-1.0
2,544,683	+		LRK53_RS11410	0.24	+1.2
2,544,711	+		LRK53_RS11410	0.26	-0.4
2,544,711	+		LRK53_RS11410	0.26	+0.6
2,544,712	-		LRK53_RS11410	0.26	-1.5
2,544,743	+		LRK53_RS11410	0.28	-1.3
2,544,744	-		LRK53_RS11410	0.28	+0.2
2,544,744	-		LRK53_RS11410	0.28	-0.1
2,544,744	-		LRK53_RS11410	0.28	-0.5
2,544,769	+		LRK53_RS11410	0.30	-0.7
2,544,769	+		LRK53_RS11410	0.30	-1.6
2,544,769	+		LRK53_RS11410	0.30	-1.9
2,544,769	+		LRK53_RS11410	0.30	+0.6
2,544,770	-		LRK53_RS11410	0.30	+1.2
2,544,770	-		LRK53_RS11410	0.30	-1.0
2,545,078	+		LRK53_RS11410	0.49	-0.4
2,545,078	+		LRK53_RS11410	0.49	-0.4
2,545,078	+		LRK53_RS11410	0.49	-0.4
2,545,079	-		LRK53_RS11410	0.49	-1.1
2,545,177	+		LRK53_RS11410	0.55	-0.4
2,545,177	+		LRK53_RS11410	0.55	+1.0
2,545,178	-		LRK53_RS11410	0.55	+1.2
2,545,178	-		LRK53_RS11410	0.55	+1.2
2,545,178	-		LRK53_RS11410	0.55	-2.1
2,545,178	-		LRK53_RS11410	0.55	+1.9