Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS11345

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
2,527,967	+		LRK53_RS11340	0.64	+1.8
2,527,968	-		LRK53_RS11340	0.64	+1.8
2,528,132	+		LRK53_RS11340	0.72	+1.1
2,528,133	-		LRK53_RS11340	0.72	+1.8
2,528,412	+		LRK53_RS11340	0.86	-0.4
2,528,413	-		LRK53_RS11340	0.86	+0.2
2,528,413	-		LRK53_RS11340	0.86	-1.6
2,528,465	+		LRK53_RS11340	0.89	-1.8
2,528,465	+		LRK53_RS11340	0.89	-0.7
2,528,466	-		LRK53_RS11340	0.89	-0.6
2,528,693	+				+0.8
2,528,694	-				+0.0
2,528,694	-				+0.4
2,528,694	-				-0.5
2,528,812	+				-1.1
2,528,812	+				-0.8
2,528,812	+				-0.7
2,528,812	+				-1.3
2,528,812	+				-2.1
2,528,812	+				-2.0
2,528,812	+				-0.8
2,528,812	+				+0.6
2,528,812	+				+2.8
2,528,812	+				-0.8
2,528,812	+				-0.8
2,528,813	-				-1.6
2,528,813	-				-0.8
2,528,813	-				+0.9
2,528,813	-				-1.1
2,528,813	-				-0.6
2,528,813	-				-0.7
2,528,813	-				+0.3
2,528,813	-				-1.6
2,528,813	-				-0.2
2,528,813	-				-0.2
2,528,813	-				-0.4
2,528,813	-				+0.2
2,528,816	+				+0.4
2,528,816	+				-1.7
2,528,816	+				-0.1
2,528,816	+				+0.5
2,528,816	+				-1.0
2,528,816	+				+0.2
2,528,816	+				+0.2
2,528,816	+				-1.6
2,528,817	-				+0.2
2,528,884	+				+0.1
2,528,898	+				+0.2
2,528,898	+				-0.3
2,528,898	+				-0.5
2,528,908	-				-1.4
2,528,908	-				-1.1
2,528,911	-				+1.4
2,528,918	+				+0.2
2,528,930	+				-0.3
2,528,943	+				-0.2
2,528,943	+				+0.9
2,528,946	-				+0.7
2,528,965	+				-1.9
2,528,965	+				-1.1
2,528,965	+				+1.2
2,528,965	+				-0.4
2,528,965	+				-0.9
2,528,965	+				-2.1
2,528,965	+				+0.4
2,528,965	+				+1.8
2,528,965	+				-0.8
2,528,965	+				+1.6
2,528,965	+				+1.2
2,528,965	+				-1.5
2,528,965	+				+0.4
2,528,965	+				+0.2
2,528,965	+				-1.4
2,528,965	+				+0.2
2,528,965	+				-0.6
2,528,965	+				-1.4
2,528,965	+				+0.3
2,528,965	+				+0.0
2,528,965	+				-0.4
2,528,965	+				-0.7
2,528,966	-				+0.8
2,528,966	-				+0.2
2,528,966	-				-1.3
2,528,966	-				+0.8
2,528,970	+				+1.8
2,528,970	+				-0.8
2,528,970	+				+1.2
2,528,970	+				-1.8
2,528,970	+				-1.6
2,528,970	+				-0.8
2,528,970	+				-1.0
2,528,970	+				-0.6
2,528,970	+				-0.8
2,528,970	+				-0.4
2,528,971	-				-1.8
2,528,971	-				-0.9
2,528,971	-				+0.8
2,529,213	+		LRK53_RS11345	0.29	+0.2
2,529,214	-		LRK53_RS11345	0.29	+1.8
2,529,214	-		LRK53_RS11345	0.29	+1.2
2,529,237	+		LRK53_RS11345	0.32	-0.0
2,529,237	+		LRK53_RS11345	0.32	-0.7
2,529,237	+		LRK53_RS11345	0.32	+0.9
2,529,237	+		LRK53_RS11345	0.32	-1.5
2,529,237	+		LRK53_RS11345	0.32	+0.5
2,529,237	+		LRK53_RS11345	0.32	-2.0
2,529,237	+		LRK53_RS11345	0.32	+0.2
2,529,237	+		LRK53_RS11345	0.32	-0.4
2,529,238	-		LRK53_RS11345	0.32	-1.4
2,529,238	-		LRK53_RS11345	0.32	-1.1
2,529,238	-		LRK53_RS11345	0.32	-0.5
2,529,333	+		LRK53_RS11345	0.43	-0.9
2,529,333	+		LRK53_RS11345	0.43	-0.4
2,529,333	+		LRK53_RS11345	0.43	-0.4
2,529,333	+		LRK53_RS11345	0.43	+0.2
2,529,333	+		LRK53_RS11345	0.43	+0.4
2,529,333	+		LRK53_RS11345	0.43	-1.7
2,529,333	+		LRK53_RS11345	0.43	+0.2
2,529,333	+		LRK53_RS11345	0.43	-0.4
2,529,333	+		LRK53_RS11345	0.43	-0.8
2,529,333	+		LRK53_RS11345	0.43	-0.4
2,529,333	+		LRK53_RS11345	0.43	+2.2
2,529,333	+		LRK53_RS11345	0.43	-2.8
2,529,333	+		LRK53_RS11345	0.43	+0.6
2,529,333	+		LRK53_RS11345	0.43	-1.1
2,529,333	+		LRK53_RS11345	0.43	-0.4
2,529,333	+		LRK53_RS11345	0.43	-0.8
2,529,333	+		LRK53_RS11345	0.43	-2.0
2,529,333	+		LRK53_RS11345	0.43	-1.1
2,529,334	-		LRK53_RS11345	0.43	-1.2
2,529,334	-		LRK53_RS11345	0.43	-2.0
2,529,334	-		LRK53_RS11345	0.43	-0.4
2,529,334	-		LRK53_RS11345	0.43	-0.9
2,529,334	-		LRK53_RS11345	0.43	+0.4
2,529,334	-		LRK53_RS11345	0.43	-1.1
2,529,334	-		LRK53_RS11345	0.43	+0.8
2,529,334	-		LRK53_RS11345	0.43	+0.2
2,529,334	-		LRK53_RS11345	0.43	+0.2
2,529,334	-		LRK53_RS11345	0.43	+0.2
2,529,334	-		LRK53_RS11345	0.43	-2.0
2,529,567	+		LRK53_RS11345	0.68	-0.4
2,529,567	+		LRK53_RS11345	0.68	-0.4
2,529,567	+		LRK53_RS11345	0.68	+1.8
2,529,567	+		LRK53_RS11345	0.68	-1.1
2,529,567	+		LRK53_RS11345	0.68	-0.6
2,529,567	+		LRK53_RS11345	0.68	-0.9
2,529,567	+		LRK53_RS11345	0.68	-0.4
2,529,567	+		LRK53_RS11345	0.68	-0.6
2,529,568	-		LRK53_RS11345	0.68	-1.1
2,529,568	-		LRK53_RS11345	0.68	-0.7
2,529,568	-		LRK53_RS11345	0.68	-0.8
2,529,568	-		LRK53_RS11345	0.68	-0.8
2,529,568	-		LRK53_RS11345	0.68	+0.2
2,529,568	-		LRK53_RS11345	0.68	+0.6
2,529,726	+		LRK53_RS11345	0.86	-0.6
2,529,726	+		LRK53_RS11345	0.86	+1.2
2,529,726	+		LRK53_RS11345	0.86	+1.2
2,529,726	+		LRK53_RS11345	0.86	+1.0
2,529,726	+		LRK53_RS11345	0.86	-0.7
2,529,726	+		LRK53_RS11345	0.86	+0.4
2,529,726	+		LRK53_RS11345	0.86	-0.6
2,529,726	+		LRK53_RS11345	0.86	+1.2
2,529,726	+		LRK53_RS11345	0.86	+0.4
2,529,726	+		LRK53_RS11345	0.86	-0.1
2,529,727	-		LRK53_RS11345	0.86	+0.1
2,529,727	-		LRK53_RS11345	0.86	-1.0
2,529,727	-		LRK53_RS11345	0.86	-1.4
2,529,727	-		LRK53_RS11345	0.86	-0.2
2,529,727	-		LRK53_RS11345	0.86	-0.4
2,529,753	+		LRK53_RS11345	0.89	-1.1
2,529,753	+		LRK53_RS11345	0.89	-1.6
2,529,753	+		LRK53_RS11345	0.89	+2.2
2,529,753	+		LRK53_RS11345	0.89	+0.2
2,529,753	+		LRK53_RS11345	0.89	-1.1
2,529,753	+		LRK53_RS11345	0.89	-0.7
2,529,753	+		LRK53_RS11345	0.89	+0.2
2,529,753	+		LRK53_RS11345	0.89	-1.6
2,529,753	+		LRK53_RS11345	0.89	-0.8
2,529,753	+		LRK53_RS11345	0.89	-0.7
2,529,753	+		LRK53_RS11345	0.89	-1.4
2,529,753	+		LRK53_RS11345	0.89	-0.7
2,529,753	+		LRK53_RS11345	0.89	+1.2
2,529,754	-		LRK53_RS11345	0.89	-0.1
2,529,754	-		LRK53_RS11345	0.89	+0.8
2,529,754	-		LRK53_RS11345	0.89	-0.4
2,529,754	-		LRK53_RS11345	0.89	+1.2
2,529,754	-		LRK53_RS11345	0.89	-1.6
2,529,754	-		LRK53_RS11345	0.89	-2.4
2,529,754	-		LRK53_RS11345	0.89	-0.2
2,529,754	-		LRK53_RS11345	0.89	-0.1
2,529,754	-		LRK53_RS11345	0.89	-0.7
2,529,754	-		LRK53_RS11345	0.89	-0.9
2,529,754	-		LRK53_RS11345	0.89	+1.0
2,530,136	+				-0.8
2,530,157	+				-0.4
2,530,157	+				-0.4
2,530,157	+				-1.6
2,530,157	+				+1.2
2,530,158	-				-1.3
2,530,158	-				-0.1
2,530,158	-				+0.1
2,530,292	+		LRK53_RS11355	0.34	-0.7
2,530,292	+		LRK53_RS11355	0.34	+0.9
2,530,293	-		LRK53_RS11355	0.34	-1.7
2,530,293	-		LRK53_RS11355	0.34	+1.2
2,530,293	-		LRK53_RS11355	0.34	-0.4
2,530,293	-		LRK53_RS11355	0.34	+0.2
2,530,293	-		LRK53_RS11355	0.34	-1.0
2,530,293	-		LRK53_RS11355	0.34	-0.8
2,530,293	-		LRK53_RS11355	0.34	-1.4
2,530,293	-		LRK53_RS11355	0.34	-1.1
2,530,293	-		LRK53_RS11355	0.34	+0.8
2,530,463	+		LRK53_RS11355	0.70	-0.7
2,530,463	+		LRK53_RS11355	0.70	-0.4
2,530,463	+		LRK53_RS11355	0.70	+0.2
2,530,463	+		LRK53_RS11355	0.70	+0.6
2,530,464	-		LRK53_RS11355	0.70	-0.9
2,530,464	-		LRK53_RS11355	0.70	-0.4
2,530,464	-		LRK53_RS11355	0.70	-0.2
2,530,464	-		LRK53_RS11355	0.70	-1.2
2,530,464	-		LRK53_RS11355	0.70	-1.1
2,530,521	+		LRK53_RS11355	0.82	-2.2
2,530,521	+		LRK53_RS11355	0.82	-2.3
2,530,521	+		LRK53_RS11355	0.82	-0.5
2,530,521	+		LRK53_RS11355	0.82	-2.3
2,530,521	+		LRK53_RS11355	0.82	+0.5
2,530,521	+		LRK53_RS11355	0.82	+1.0
2,530,522	-		LRK53_RS11355	0.82	+0.4
2,530,522	-		LRK53_RS11355	0.82	+0.2
2,530,522	-		LRK53_RS11355	0.82	-0.8
2,530,522	-		LRK53_RS11355	0.82	-0.7
2,530,522	-		LRK53_RS11355	0.82	+0.6
2,530,522	-		LRK53_RS11355	0.82	-0.7
2,530,587	+				-1.5
2,530,588	-				-0.5
2,530,611	+				-0.3
2,530,611	+				+1.2
2,530,611	+				-2.6
2,530,612	-				-1.0
2,530,612	-				-0.8
2,530,612	-				-0.4
2,530,612	-				-1.9
2,530,612	-				+0.6
2,530,612	-				-0.0
2,530,612	-				-1.1
2,530,641	+				-1.1
2,530,642	-				+0.2
2,530,642	-				-0.4
2,530,642	-				-1.0
2,530,642	-				+1.2
2,530,642	-				-0.3
2,530,642	-				-1.4
2,530,642	-				-0.1
2,530,642	-				-1.7
2,530,642	-				-0.1
2,530,642	-				+0.2