Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS10765

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
2,404,070	+		LRK53_RS10755	0.33	-0.3
2,404,070	+		LRK53_RS10755	0.33	+1.2
2,404,070	+		LRK53_RS10755	0.33	-0.2
2,404,070	+		LRK53_RS10755	0.33	-1.7
2,404,070	+		LRK53_RS10755	0.33	+0.2
2,404,070	+		LRK53_RS10755	0.33	-0.0
2,404,071	-		LRK53_RS10755	0.33	-0.5
2,404,071	-		LRK53_RS10755	0.33	-0.9
2,404,071	-		LRK53_RS10755	0.33	-1.5
2,404,071	-		LRK53_RS10755	0.33	-0.8
2,404,071	-		LRK53_RS10755	0.33	+0.2
2,404,193	+		LRK53_RS10755	0.52	+1.2
2,404,193	+		LRK53_RS10755	0.52	-1.0
2,404,194	-		LRK53_RS10755	0.52	-1.4
2,404,194	-		LRK53_RS10755	0.52	+0.6
2,404,194	-		LRK53_RS10755	0.52	-0.4
2,404,325	+		LRK53_RS10755	0.73	+1.2
2,404,325	+		LRK53_RS10755	0.73	+0.1
2,404,325	+		LRK53_RS10755	0.73	-1.2
2,404,326	-		LRK53_RS10755	0.73	+0.2
2,404,326	-		LRK53_RS10755	0.73	-1.2
2,404,326	-		LRK53_RS10755	0.73	-1.2
2,404,326	-		LRK53_RS10755	0.73	+0.2
2,404,331	+		LRK53_RS10755	0.74	+0.2
2,404,451	+				+1.7
2,404,451	+				-1.4
2,404,451	+				+0.6
2,404,451	+				+0.2
2,404,451	+				+0.3
2,404,451	+				-0.9
2,404,451	+				-1.9
2,404,451	+				-1.4
2,404,452	-				-2.6
2,404,452	-				-0.4
2,404,452	-				-1.7
2,404,452	-				-0.8
2,404,452	-				-0.5
2,404,452	-				-1.5
2,404,452	-				-0.8
2,404,469	+				+0.2
2,404,469	+				-0.7
2,404,469	+				+0.0
2,404,469	+				-0.1
2,404,469	+				+0.2
2,404,469	+				+0.2
2,404,469	+				-1.0
2,404,469	+				-2.2
2,404,469	+				+1.2
2,404,469	+				-0.6
2,404,469	+				+0.2
2,404,469	+				+0.6
2,404,469	+				-0.2
2,404,469	+				-1.1
2,404,469	+				-0.7
2,404,469	+				+0.1
2,404,469	+				-0.1
2,404,469	+				+1.3
2,404,469	+				-0.4
2,404,469	+				-0.7
2,404,469	+				-0.4
2,404,469	+				-0.4
2,404,469	+				-0.7
2,404,469	+				-0.1
2,404,469	+				+0.1
2,404,469	+				-0.1
2,404,469	+				+1.7
2,404,469	+				+0.9
2,404,469	+				+1.7
2,404,469	+				-0.6
2,404,469	+				-0.8
2,404,469	+				-1.0
2,404,469	+				-0.1
2,404,469	+				+1.2
2,404,470	-				-0.7
2,404,470	-				-0.8
2,404,470	-				-0.3
2,404,470	-				+0.5
2,404,470	-				-2.5
2,404,470	-				+0.2
2,404,470	-				-0.1
2,404,470	-				-0.4
2,404,470	-				-1.3
2,404,470	-				-0.1
2,404,470	-				-1.4
2,404,470	-				+0.2
2,404,470	-				+2.2
2,404,470	-				-1.8
2,404,470	-				-0.1
2,404,470	-				-0.8
2,404,470	-				-0.9
2,404,470	-				+0.3
2,404,470	-				+0.6
2,404,470	-				-0.3
2,404,470	-				+0.6
2,404,470	-				+2.6
2,404,470	-				-0.2
2,404,470	-				-1.1
2,404,470	-				-1.9
2,404,470	-				+0.4
2,404,470	-				+1.5
2,404,470	-				+0.2
2,404,470	-				-0.7
2,404,470	-				+0.2
2,404,470	-				-0.1
2,404,470	-				-1.2
2,404,470	-				+0.2
2,404,470	-				+0.6
2,404,470	-				-2.4
2,404,470	-				-1.5
2,404,470	-				-1.2
2,404,470	-				-0.4
2,404,470	-				-0.0
2,404,470	-				-0.4
2,404,470	-				+2.7
2,404,470	-				-0.2
2,404,470	-				+0.2
2,404,470	-				+1.7
2,404,470	-				-4.0
2,404,470	-				-0.2
2,404,470	-				+0.4
2,404,470	-				+0.2
2,404,470	-				+1.2
2,404,470	-				-0.4
2,404,470	-				-1.1
2,404,470	-				-0.6
2,404,470	-				-0.4
2,404,470	-				-0.4
2,404,470	-				-0.6
2,404,470	-				-1.4
2,404,470	-				-0.4
2,404,470	-				-1.3
2,404,470	-				+1.2
2,404,484	+				+0.9
2,404,484	+				-0.6
2,404,549	-				-0.9
2,404,699	+		LRK53_RS10760	0.41	-0.7
2,404,699	+		LRK53_RS10760	0.41	-0.9
2,404,699	+		LRK53_RS10760	0.41	-1.8
2,404,699	+		LRK53_RS10760	0.41	+1.5
2,404,699	+		LRK53_RS10760	0.41	+0.4
2,404,700	-		LRK53_RS10760	0.42	+0.0
2,404,700	-		LRK53_RS10760	0.42	-2.5
2,404,700	-		LRK53_RS10760	0.42	-0.8
2,404,762	+		LRK53_RS10760	0.56	-1.4
2,404,762	+		LRK53_RS10760	0.56	-1.4
2,404,762	+		LRK53_RS10760	0.56	-1.8
2,404,762	+		LRK53_RS10760	0.56	-1.2
2,404,762	+		LRK53_RS10760	0.56	-1.2
2,404,763	-		LRK53_RS10760	0.56	-2.7
2,404,763	-		LRK53_RS10760	0.56	+1.0
2,404,763	-		LRK53_RS10760	0.56	-0.5
2,404,783	-		LRK53_RS10760	0.60	-0.4
2,404,998	+				-0.5
2,404,999	-				-0.1
2,405,010	+				+0.3
2,405,010	+				+0.3
2,405,010	+				+0.2
2,405,010	+				+0.6
2,405,011	-				-1.2
2,405,011	-				-1.6
2,405,011	-				+2.4
2,405,011	-				-0.2
2,405,011	-				-0.1
2,405,011	-				+0.8
2,405,011	-				-0.0
2,405,011	-				+0.2
2,405,029	+				-0.3
2,405,029	+				-2.2
2,405,040	+				+0.2
2,405,040	+				-1.0
2,405,040	+				-1.0
2,405,041	-				-1.8
2,405,043	+				-1.5
2,405,044	-				+0.2
2,405,136	+		LRK53_RS10765	0.11	-1.4
2,405,136	+		LRK53_RS10765	0.11	-0.7
2,405,136	+		LRK53_RS10765	0.11	+0.4
2,405,136	+		LRK53_RS10765	0.11	-0.8
2,405,136	+		LRK53_RS10765	0.11	-1.6
2,405,137	-		LRK53_RS10765	0.12	+0.5
2,405,137	-		LRK53_RS10765	0.12	+0.3
2,405,137	-		LRK53_RS10765	0.12	-2.5
2,405,137	-		LRK53_RS10765	0.12	-0.8
2,405,137	-		LRK53_RS10765	0.12	-0.5
2,405,137	-		LRK53_RS10765	0.12	-0.4
2,405,137	-		LRK53_RS10765	0.12	-1.7
2,405,163	+		LRK53_RS10765	0.14	-0.6
2,405,163	+		LRK53_RS10765	0.14	+0.2
2,405,163	+		LRK53_RS10765	0.14	-1.1
2,405,163	+		LRK53_RS10765	0.14	-0.7
2,405,163	+		LRK53_RS10765	0.14	-0.4
2,405,163	+		LRK53_RS10765	0.14	-2.3
2,405,164	-		LRK53_RS10765	0.14	-0.0
2,405,164	-		LRK53_RS10765	0.14	-0.3
2,405,164	-		LRK53_RS10765	0.14	-0.2
2,405,164	-		LRK53_RS10765	0.14	-0.8
2,405,164	-		LRK53_RS10765	0.14	-0.9
2,405,164	-		LRK53_RS10765	0.14	+2.5
2,405,164	-		LRK53_RS10765	0.14	-0.8
2,405,164	-		LRK53_RS10765	0.14	+0.6
2,405,164	-		LRK53_RS10765	0.14	-1.8
2,405,164	-		LRK53_RS10765	0.14	-0.2
2,405,164	-		LRK53_RS10765	0.14	-0.4
2,405,164	-		LRK53_RS10765	0.14	+0.2
2,405,164	-		LRK53_RS10765	0.14	-1.4
2,405,164	-		LRK53_RS10765	0.14	-0.8
2,405,164	-		LRK53_RS10765	0.14	+1.2
2,405,169	-		LRK53_RS10765	0.15	-1.0
2,405,169	-		LRK53_RS10765	0.15	+0.2
2,405,169	-		LRK53_RS10765	0.15	-0.8
2,405,181	+		LRK53_RS10765	0.16	-2.0
2,405,182	-		LRK53_RS10765	0.16	-0.7
2,405,182	-		LRK53_RS10765	0.16	-0.1
2,405,182	-		LRK53_RS10765	0.16	+2.7
2,405,182	-		LRK53_RS10765	0.16	-0.2
2,405,498	+		LRK53_RS10765	0.48	-1.0
2,405,498	+		LRK53_RS10765	0.48	-3.2
2,405,762	+		LRK53_RS10765	0.75	-0.6
2,405,763	-		LRK53_RS10765	0.75	+0.6
2,405,763	-		LRK53_RS10765	0.75	+0.2
2,405,807	+		LRK53_RS10765	0.80	-0.7
2,405,992	+				-2.2
2,405,992	+				-0.4
2,405,992	+				-0.3
2,405,992	+				-2.5
2,405,992	+				-0.8
2,405,993	-				-2.3
2,405,993	-				+0.2
2,405,993	-				-1.4
2,405,993	-				-1.0
2,405,993	-				-0.8
2,405,993	-				-1.3
2,406,030	+				-0.4
2,406,033	+				-0.6
2,406,034	-				-1.7
2,406,079	+				-1.4
2,406,080	-				+1.2
2,406,080	-				-1.2
2,406,080	-				+0.6
2,406,080	-				-0.7
2,406,080	-				+0.6
2,406,080	-				+0.8
2,406,159	+				+0.7
2,406,159	+				-0.7
2,406,159	+				+0.7
2,406,160	-				+0.2
2,406,160	-				-0.4
2,406,160	-				-0.8
2,406,160	-				-2.8
2,406,195	+				-1.5
2,406,195	+				+0.1
2,406,196	-				-1.1
2,406,196	-				-0.5
2,406,196	-				-0.7
2,406,196	-				+1.3
2,406,196	-				-2.4
2,406,196	-				+0.0
2,406,242	-				-1.2
2,406,242	-				-1.2
2,406,242	-				-1.3
2,406,242	-				-0.8
2,406,242	-				+1.2
2,406,248	-				-0.6
2,406,248	-				-1.4
2,406,248	-				-0.5
2,406,267	+				-0.4
2,406,267	+				+0.0
2,406,267	+				-0.8
2,406,267	+				-0.8
2,406,267	+				-1.4
2,406,268	-				-0.2
2,406,268	-				-2.0
2,406,268	-				-0.7
2,406,268	-				-1.1
2,406,448	+		LRK53_RS10770	0.17	-3.4
2,406,448	+		LRK53_RS10770	0.17	-0.8
2,406,448	+		LRK53_RS10770	0.17	-1.5
2,406,448	+		LRK53_RS10770	0.17	-2.2
2,406,448	+		LRK53_RS10770	0.17	-0.6
2,406,448	+		LRK53_RS10770	0.17	-1.2
2,406,448	+		LRK53_RS10770	0.17	-2.2
2,406,449	-		LRK53_RS10770	0.17	-3.0
2,406,449	-		LRK53_RS10770	0.17	-1.2
2,406,449	-		LRK53_RS10770	0.17	-0.4
2,406,449	-		LRK53_RS10770	0.17	-0.2
2,406,449	-		LRK53_RS10770	0.17	+0.0
2,406,449	-		LRK53_RS10770	0.17	+1.2
2,406,449	-		LRK53_RS10770	0.17	-1.0
2,406,449	-		LRK53_RS10770	0.17	+0.2
2,406,449	-		LRK53_RS10770	0.17	-2.8
2,406,449	-		LRK53_RS10770	0.17	-2.3
2,406,505	+		LRK53_RS10770	0.26	-0.5
2,406,505	+		LRK53_RS10770	0.26	-0.1
2,406,506	-		LRK53_RS10770	0.26	-1.8
2,406,506	-		LRK53_RS10770	0.26	-2.0
2,406,506	-		LRK53_RS10770	0.26	-1.7
2,406,506	-		LRK53_RS10770	0.26	+0.2
2,406,506	-		LRK53_RS10770	0.26	-1.0
2,406,506	-		LRK53_RS10770	0.26	-1.6
2,406,580	+		LRK53_RS10770	0.37	-0.5
2,406,580	+		LRK53_RS10770	0.37	-0.1
2,406,581	-		LRK53_RS10770	0.37	-0.9
2,406,581	-		LRK53_RS10770	0.37	+1.2
2,406,581	-		LRK53_RS10770	0.37	-0.3
2,406,581	-		LRK53_RS10770	0.37	+0.2
2,406,581	-		LRK53_RS10770	0.37	+0.2
2,406,581	-		LRK53_RS10770	0.37	-0.8
2,406,581	-		LRK53_RS10770	0.37	-0.3
2,406,899	+		LRK53_RS10770	0.86	+0.0
2,406,900	-		LRK53_RS10770	0.86	-0.4
2,406,918	-		LRK53_RS10770	0.88	+0.2
2,406,918	-		LRK53_RS10770	0.88	+0.3