Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS10540

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
2,354,079	-		LRK53_RS10535	0.38	-1.4
2,354,092	+		LRK53_RS10535	0.39	-1.4
2,354,092	+		LRK53_RS10535	0.39	+1.1
2,354,092	+		LRK53_RS10535	0.39	+1.4
2,354,092	+		LRK53_RS10535	0.39	-0.4
2,354,093	-		LRK53_RS10535	0.39	-0.7
2,354,093	-		LRK53_RS10535	0.39	+0.6
2,354,104	+		LRK53_RS10535	0.40	+0.1
2,354,104	+		LRK53_RS10535	0.40	-0.6
2,354,104	+		LRK53_RS10535	0.40	-1.2
2,354,104	+		LRK53_RS10535	0.40	+1.0
2,354,104	+		LRK53_RS10535	0.40	-0.6
2,354,105	-		LRK53_RS10535	0.40	-1.2
2,354,105	-		LRK53_RS10535	0.40	+0.1
2,354,105	-		LRK53_RS10535	0.40	+0.1
2,354,105	-		LRK53_RS10535	0.40	-0.2
2,354,105	-		LRK53_RS10535	0.40	-1.0
2,354,113	+		LRK53_RS10535	0.41	-0.8
2,354,113	+		LRK53_RS10535	0.41	-0.7
2,354,113	+		LRK53_RS10535	0.41	-0.5
2,354,114	-		LRK53_RS10535	0.41	-1.2
2,354,114	-		LRK53_RS10535	0.41	+0.5
2,354,114	-		LRK53_RS10535	0.41	+1.1
2,354,178	+		LRK53_RS10535	0.46	+0.1
2,354,178	+		LRK53_RS10535	0.46	-0.7
2,354,178	+		LRK53_RS10535	0.46	-1.2
2,354,178	+		LRK53_RS10535	0.46	+0.1
2,354,178	+		LRK53_RS10535	0.46	+0.1
2,354,178	+		LRK53_RS10535	0.46	-0.7
2,354,179	-		LRK53_RS10535	0.46	+1.1
2,354,179	-		LRK53_RS10535	0.46	-0.4
2,354,179	-		LRK53_RS10535	0.46	-0.4
2,354,179	-		LRK53_RS10535	0.46	-1.9
2,354,179	-		LRK53_RS10535	0.46	-0.4
2,354,179	-		LRK53_RS10535	0.46	-3.0
2,354,179	-		LRK53_RS10535	0.46	-1.4
2,354,366	+		LRK53_RS10535	0.62	+0.3
2,354,366	+		LRK53_RS10535	0.62	+0.1
2,354,366	+		LRK53_RS10535	0.62	-0.9
2,354,366	+		LRK53_RS10535	0.62	+0.1
2,354,366	+		LRK53_RS10535	0.62	-0.1
2,354,366	+		LRK53_RS10535	0.62	+0.5
2,354,367	-		LRK53_RS10535	0.62	+0.0
2,354,367	-		LRK53_RS10535	0.62	-0.2
2,354,367	-		LRK53_RS10535	0.62	-2.4
2,354,367	-		LRK53_RS10535	0.62	-0.7
2,354,367	-		LRK53_RS10535	0.62	+0.6
2,354,367	-		LRK53_RS10535	0.62	-1.5
2,354,367	-		LRK53_RS10535	0.62	-0.6
2,354,368	+		LRK53_RS10535	0.62	-1.0
2,354,368	+		LRK53_RS10535	0.62	-2.0
2,354,368	+		LRK53_RS10535	0.62	-0.6
2,354,368	+		LRK53_RS10535	0.62	+0.5
2,354,368	+		LRK53_RS10535	0.62	-1.6
2,354,368	+		LRK53_RS10535	0.62	-0.4
2,354,368	+		LRK53_RS10535	0.62	-1.5
2,354,368	+		LRK53_RS10535	0.62	-1.9
2,354,368	+		LRK53_RS10535	0.62	-1.5
2,354,368	+		LRK53_RS10535	0.62	-2.2
2,354,369	-		LRK53_RS10535	0.62	-2.2
2,354,369	-		LRK53_RS10535	0.62	-0.2
2,354,369	-		LRK53_RS10535	0.62	-0.9
2,354,369	-		LRK53_RS10535	0.62	-0.4
2,354,369	-		LRK53_RS10535	0.62	-1.9
2,354,369	-		LRK53_RS10535	0.62	-1.2
2,354,369	-		LRK53_RS10535	0.62	-1.1
2,354,369	-		LRK53_RS10535	0.62	+2.1
2,354,437	+		LRK53_RS10535	0.68	-1.4
2,354,438	-		LRK53_RS10535	0.68	+0.3
2,354,509	+		LRK53_RS10535	0.74	+0.0
2,354,510	-		LRK53_RS10535	0.74	-1.6
2,354,510	-		LRK53_RS10535	0.74	-0.8
2,354,594	+		LRK53_RS10535	0.81	+2.1
2,354,594	+		LRK53_RS10535	0.81	-0.6
2,354,594	+		LRK53_RS10535	0.81	-0.5
2,354,594	+		LRK53_RS10535	0.81	-2.0
2,354,595	-		LRK53_RS10535	0.81	+0.1
2,354,836	-				-2.0
2,354,847	-				-2.6
2,354,847	-				+0.9
2,354,896	-				+0.1
2,355,036	+		LRK53_RS10540	0.17	+0.1
2,355,036	+		LRK53_RS10540	0.17	-0.0
2,355,036	+		LRK53_RS10540	0.17	+2.7
2,355,036	+		LRK53_RS10540	0.17	-2.3
2,355,036	+		LRK53_RS10540	0.17	+1.1
2,355,036	+		LRK53_RS10540	0.17	+0.8
2,355,036	+		LRK53_RS10540	0.17	-1.9
2,355,036	+		LRK53_RS10540	0.17	-0.4
2,355,037	-		LRK53_RS10540	0.17	+1.1
2,355,037	-		LRK53_RS10540	0.17	-2.4
2,355,037	-		LRK53_RS10540	0.17	-2.4
2,355,037	-		LRK53_RS10540	0.17	-0.1
2,355,037	-		LRK53_RS10540	0.17	-1.4
2,355,037	-		LRK53_RS10540	0.17	-2.2
2,355,037	-		LRK53_RS10540	0.17	+0.1
2,355,037	-		LRK53_RS10540	0.17	-0.1
2,355,037	-		LRK53_RS10540	0.17	-0.4
2,355,037	-		LRK53_RS10540	0.17	+1.7
2,355,037	-		LRK53_RS10540	0.17	-2.2
2,355,336	+		LRK53_RS10540	0.43	+0.6
2,355,336	+		LRK53_RS10540	0.43	-0.0
2,355,336	+		LRK53_RS10540	0.43	+0.1
2,355,336	+		LRK53_RS10540	0.43	+0.0
2,355,336	+		LRK53_RS10540	0.43	-0.2
2,355,337	-		LRK53_RS10540	0.43	+2.1
2,355,337	-		LRK53_RS10540	0.43	+0.0
2,355,337	-		LRK53_RS10540	0.43	+0.9
2,355,337	-		LRK53_RS10540	0.43	+0.3
2,355,337	-		LRK53_RS10540	0.43	+1.4
2,355,337	-		LRK53_RS10540	0.43	-0.3
2,355,566	+		LRK53_RS10540	0.62	-1.2
2,355,575	+		LRK53_RS10540	0.63	+0.7
2,355,575	+		LRK53_RS10540	0.63	-0.9
2,355,575	+		LRK53_RS10540	0.63	+1.1
2,355,576	-		LRK53_RS10540	0.63	-0.4
2,355,576	-		LRK53_RS10540	0.63	+0.1
2,355,579	+		LRK53_RS10540	0.63	-1.2
2,355,579	+		LRK53_RS10540	0.63	-1.0
2,355,579	+		LRK53_RS10540	0.63	+0.7
2,355,579	+		LRK53_RS10540	0.63	-0.4
2,355,579	+		LRK53_RS10540	0.63	-1.7
2,355,579	+		LRK53_RS10540	0.63	+0.1
2,355,580	-		LRK53_RS10540	0.63	+0.5
2,355,580	-		LRK53_RS10540	0.63	+1.6
2,355,580	-		LRK53_RS10540	0.63	-0.7
2,355,580	-		LRK53_RS10540	0.63	-0.4
2,356,160	+				+0.1
2,356,160	+				+0.8
2,356,160	+				+1.1
2,356,160	+				+0.3
2,356,160	+				-1.7
2,356,161	-				-0.4
2,356,161	-				-0.4
2,356,196	+				-1.7
2,356,289	+		LRK53_RS10545	0.13	-2.2
2,356,289	+		LRK53_RS10545	0.13	+0.9
2,356,290	-		LRK53_RS10545	0.13	+0.9
2,356,409	+		LRK53_RS10545	0.19	-0.2
2,356,409	+		LRK53_RS10545	0.19	+1.1
2,356,481	+		LRK53_RS10545	0.22	+1.1
2,356,481	+		LRK53_RS10545	0.22	-1.2
2,356,481	+		LRK53_RS10545	0.22	-1.7
2,356,481	+		LRK53_RS10545	0.22	+0.9
2,356,482	-		LRK53_RS10545	0.22	-1.0
2,356,482	-		LRK53_RS10545	0.22	-1.9
2,356,613	+		LRK53_RS10545	0.28	+0.2
2,356,671	+		LRK53_RS10545	0.31	-0.7
2,356,696	+		LRK53_RS10545	0.32	+0.5
2,356,696	+		LRK53_RS10545	0.32	-1.9
2,356,696	+		LRK53_RS10545	0.32	-0.4
2,356,697	-		LRK53_RS10545	0.32	-1.4
2,356,697	-		LRK53_RS10545	0.32	-1.4
2,356,697	-		LRK53_RS10545	0.32	-0.4
2,356,697	-		LRK53_RS10545	0.32	+2.1
2,356,886	+		LRK53_RS10545	0.41	+1.1
2,356,886	+		LRK53_RS10545	0.41	+0.1
2,356,886	+		LRK53_RS10545	0.41	-0.2
2,356,886	+		LRK53_RS10545	0.41	-0.6
2,356,887	-		LRK53_RS10545	0.41	+0.6
2,356,887	-		LRK53_RS10545	0.41	-0.3
2,356,887	-		LRK53_RS10545	0.41	+0.1