Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS10505

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
2,347,725	+		LRK53_RS10495	0.87	-0.3
2,347,725	+		LRK53_RS10495	0.87	-0.7
2,347,783	+				-1.1
2,347,783	+				+0.2
2,347,783	+				-0.8
2,347,783	+				-2.8
2,347,783	+				+0.1
2,347,783	+				-1.0
2,347,783	+				+1.3
2,347,783	+				-0.5
2,347,784	-				-1.3
2,347,784	-				-1.5
2,347,784	-				+1.4
2,347,784	-				+0.5
2,347,784	-				+2.6
2,347,784	-				+1.5
2,347,879	+				-2.3
2,347,879	+				-0.5
2,347,879	+				-1.7
2,347,879	+				+0.4
2,347,879	+				-0.2
2,347,880	-				-0.0
2,347,962	+				-0.0
2,347,963	-				+1.9
2,347,998	+				-0.3
2,347,998	+				-0.2
2,347,998	+				+0.3
2,347,998	+				-0.9
2,347,998	+				-1.0
2,347,998	+				-1.3
2,347,999	-				-1.5
2,347,999	-				-2.4
2,347,999	-				-0.9
2,347,999	-				+1.1
2,347,999	-				-1.3
2,347,999	-				+0.1
2,347,999	-				+0.0
2,347,999	-				+0.8
2,347,999	-				+2.3
2,347,999	-				+0.9
2,348,002	+				-1.0
2,348,002	+				-2.2
2,348,002	+				+1.9
2,348,002	+				-0.4
2,348,002	+				+0.7
2,348,003	-				+1.1
2,348,003	-				-1.7
2,348,003	-				-0.1
2,348,003	-				+2.3
2,348,003	-				+1.3
2,348,003	-				-2.5
2,348,003	-				+0.6
2,348,003	-				+0.7
2,348,046	+				-1.7
2,348,046	+				-0.7
2,348,047	-				-0.5
2,348,047	-				+0.7
2,348,159	+				-0.3
2,348,159	+				-1.3
2,348,160	-				-1.1
2,348,223	+		LRK53_RS10500	0.20	-0.3
2,348,223	+		LRK53_RS10500	0.20	+0.7
2,348,223	+		LRK53_RS10500	0.20	-0.3
2,348,223	+		LRK53_RS10500	0.20	-1.7
2,348,223	+		LRK53_RS10500	0.20	-0.4
2,348,224	-		LRK53_RS10500	0.20	+0.4
2,348,326	+		LRK53_RS10500	0.48	+0.3
2,348,326	+		LRK53_RS10500	0.48	+0.2
2,348,326	+		LRK53_RS10500	0.48	-0.3
2,348,326	+		LRK53_RS10500	0.48	-0.1
2,348,327	-		LRK53_RS10500	0.48	-0.2
2,348,327	-		LRK53_RS10500	0.48	-0.4
2,348,508	+				-2.0
2,348,509	-				-0.3
2,348,574	+				+0.0
2,348,574	+				-1.1
2,348,574	+				-1.1
2,348,574	+				-1.2
2,348,574	+				-0.5
2,348,574	+				+3.3
2,348,575	-				-1.7
2,348,575	-				+0.0
2,348,575	-				+0.3
2,348,575	-				-1.3
2,348,586	+				-2.0
2,348,586	+				-1.4
2,348,587	-				-1.8
2,348,587	-				+0.3
2,348,587	-				-1.7
2,348,700	+				-0.1
2,348,720	+				-0.5
2,348,720	+				-0.8
2,348,720	+				+0.4
2,348,720	+				-0.8
2,348,720	+				+0.6
2,348,720	+				+0.4
2,348,720	+				+0.3
2,348,720	+				+0.3
2,348,720	+				-1.5
2,348,720	+				+3.3
2,348,720	+				+0.1
2,348,720	+				+1.0
2,348,720	+				-0.3
2,348,720	+				+0.9
2,348,720	+				+2.3
2,348,720	+				-0.5
2,348,720	+				+0.4
2,348,720	+				-2.3
2,348,720	+				-1.0
2,348,721	-				+0.3
2,348,721	-				+0.2
2,348,721	-				+0.3
2,348,721	-				+0.3
2,348,721	-				+0.1
2,348,721	-				+1.6
2,348,721	-				-1.5
2,348,721	-				-1.7
2,348,721	-				+0.7
2,348,721	-				+0.1
2,348,721	-				+0.1
2,348,721	-				+0.7
2,348,721	-				+2.9
2,348,721	-				-1.4
2,348,721	-				+0.6
2,348,721	-				+0.3
2,348,722	+				-0.3
2,348,722	+				-1.9
2,348,722	+				-1.5
2,348,722	+				-1.3
2,348,723	-				-0.6
2,348,723	-				+1.2
2,348,723	-				-1.0
2,348,723	-				-0.4
2,348,723	-				+0.3
2,348,779	+				+0.1
2,348,779	+				+1.3
2,348,779	+				+0.0
2,348,779	+				-0.1
2,348,779	+				-1.9
2,348,780	-				-1.3
2,348,780	-				-0.2
2,348,780	-				-0.4
2,348,780	-				-0.3
2,348,780	-				+1.3
2,348,780	-				-1.1
2,349,083	-		LRK53_RS10505	0.35	+1.3
2,349,251	-		LRK53_RS10505	0.51	-0.9
2,349,251	-		LRK53_RS10505	0.51	-0.3
2,349,251	-		LRK53_RS10505	0.51	-2.2
2,349,272	+		LRK53_RS10505	0.53	-0.0
2,349,272	+		LRK53_RS10505	0.53	-1.0
2,349,272	+		LRK53_RS10505	0.53	-1.6
2,349,272	+		LRK53_RS10505	0.53	-1.3
2,349,272	+		LRK53_RS10505	0.53	-1.0
2,349,272	+		LRK53_RS10505	0.53	-1.3
2,349,272	+		LRK53_RS10505	0.53	-0.6
2,349,273	-		LRK53_RS10505	0.53	-0.0
2,349,273	-		LRK53_RS10505	0.53	-0.7
2,349,273	-		LRK53_RS10505	0.53	-0.3
2,349,273	-		LRK53_RS10505	0.53	-1.3
2,349,273	-		LRK53_RS10505	0.53	-0.7
2,349,273	-		LRK53_RS10505	0.53	-1.9
2,349,273	-		LRK53_RS10505	0.53	-0.9
2,349,273	-		LRK53_RS10505	0.53	-0.8
2,349,273	-		LRK53_RS10505	0.53	-0.0
2,349,273	-		LRK53_RS10505	0.53	+2.3
2,349,273	-		LRK53_RS10505	0.53	-1.0
2,349,273	-		LRK53_RS10505	0.53	+0.2
2,349,632	+		LRK53_RS10505	0.86	-0.8
2,349,632	+		LRK53_RS10505	0.86	-1.6
2,349,632	+		LRK53_RS10505	0.86	-1.3
2,349,632	+		LRK53_RS10505	0.86	-2.0
2,349,632	+		LRK53_RS10505	0.86	-0.8
2,349,632	+		LRK53_RS10505	0.86	-0.7
2,349,632	+		LRK53_RS10505	0.86	-0.7
2,349,632	+		LRK53_RS10505	0.86	-2.2
2,349,632	+		LRK53_RS10505	0.86	-0.5
2,349,632	+		LRK53_RS10505	0.86	-1.0
2,349,633	-		LRK53_RS10505	0.86	+1.3
2,349,633	-		LRK53_RS10505	0.86	+1.6
2,349,633	-		LRK53_RS10505	0.86	+0.3
2,349,646	+		LRK53_RS10505	0.87	+0.3
2,349,647	-		LRK53_RS10505	0.88	-0.5
2,349,647	-		LRK53_RS10505	0.88	+2.9
2,349,727	+				-1.0
2,349,728	-				-0.7
2,349,780	+				+0.2
2,349,781	-				+0.6
2,349,781	-				+1.3
2,349,781	-				-0.2
2,349,792	+				-0.7
2,349,803	+				-1.0
2,349,803	+				-1.3
2,349,803	+				-0.7
2,349,803	+				-1.9
2,349,804	-				-2.2
2,349,804	-				-0.3
2,349,804	-				+3.6
2,349,804	-				+0.3
2,349,804	-				+0.2
2,349,804	-				-1.8
2,349,804	-				+1.3
2,349,804	-				-0.7
2,349,967	+				-0.5
2,349,973	+				-1.3
2,349,973	+				-0.6
2,349,973	+				-2.2
2,349,973	+				-1.9
2,349,973	+				+1.1
2,349,973	+				-0.1
2,349,973	+				-0.7
2,349,973	+				-1.9
2,349,973	+				-0.2
2,349,973	+				+2.9
2,349,973	+				-0.5
2,349,973	+				-1.7
2,349,973	+				+0.8
2,349,973	+				-0.6
2,349,973	+				+0.9
2,349,973	+				+0.3
2,349,974	-				-1.1
2,349,974	-				-0.5
2,349,974	-				+1.3
2,349,974	-				+0.3
2,349,974	-				+2.9
2,349,974	-				-0.3
2,350,036	+		LRK53_RS10515	0.26	-1.5
2,350,036	+		LRK53_RS10515	0.26	-0.9
2,350,036	+		LRK53_RS10515	0.26	-2.2
2,350,036	+		LRK53_RS10515	0.26	-2.2
2,350,036	+		LRK53_RS10515	0.26	+1.6
2,350,036	+		LRK53_RS10515	0.26	+0.1
2,350,036	+		LRK53_RS10515	0.26	+0.2
2,350,036	+		LRK53_RS10515	0.26	-1.5
2,350,036	+		LRK53_RS10515	0.26	+0.8
2,350,036	+		LRK53_RS10515	0.26	-0.2
2,350,036	+		LRK53_RS10515	0.26	-0.5
2,350,036	+		LRK53_RS10515	0.26	-1.0
2,350,036	+		LRK53_RS10515	0.26	+2.5
2,350,036	+		LRK53_RS10515	0.26	+0.6
2,350,036	+		LRK53_RS10515	0.26	+0.9
2,350,037	-		LRK53_RS10515	0.26	+1.3
2,350,037	-		LRK53_RS10515	0.26	-0.1
2,350,037	-		LRK53_RS10515	0.26	-1.5
2,350,037	-		LRK53_RS10515	0.26	-1.8
2,350,037	-		LRK53_RS10515	0.26	+1.5
2,350,037	-		LRK53_RS10515	0.26	+0.3
2,350,037	-		LRK53_RS10515	0.26	-0.0
2,350,080	+		LRK53_RS10515	0.42	-0.9
2,350,080	+		LRK53_RS10515	0.42	-0.7
2,350,080	+		LRK53_RS10515	0.42	-2.2
2,350,080	+		LRK53_RS10515	0.42	-1.0
2,350,080	+		LRK53_RS10515	0.42	+0.7
2,350,080	+		LRK53_RS10515	0.42	+0.1
2,350,080	+		LRK53_RS10515	0.42	-0.6
2,350,080	+		LRK53_RS10515	0.42	-2.3
2,350,080	+		LRK53_RS10515	0.42	+0.1
2,350,080	+		LRK53_RS10515	0.42	-0.3
2,350,080	+		LRK53_RS10515	0.42	+0.1
2,350,080	+		LRK53_RS10515	0.42	-0.9
2,350,080	+		LRK53_RS10515	0.42	-0.0
2,350,080	+		LRK53_RS10515	0.42	+0.5
2,350,081	-		LRK53_RS10515	0.42	-1.3
2,350,081	-		LRK53_RS10515	0.42	+2.3
2,350,081	-		LRK53_RS10515	0.42	-1.5
2,350,081	-		LRK53_RS10515	0.42	-2.0
2,350,081	-		LRK53_RS10515	0.42	-0.9
2,350,081	-		LRK53_RS10515	0.42	-1.0
2,350,081	-		LRK53_RS10515	0.42	-1.8
2,350,081	-		LRK53_RS10515	0.42	-0.7
2,350,081	-		LRK53_RS10515	0.42	-0.3
2,350,081	-		LRK53_RS10515	0.42	-1.3
2,350,144	+		LRK53_RS10515	0.65	-0.6
2,350,144	+		LRK53_RS10515	0.65	-0.1
2,350,144	+		LRK53_RS10515	0.65	-0.3
2,350,144	+		LRK53_RS10515	0.65	+0.6
2,350,145	-		LRK53_RS10515	0.66	-0.3
2,350,145	-		LRK53_RS10515	0.66	-1.6
2,350,145	-		LRK53_RS10515	0.66	+0.9
2,350,145	-		LRK53_RS10515	0.66	-0.4
2,350,145	-		LRK53_RS10515	0.66	-0.7
2,350,145	-		LRK53_RS10515	0.66	-1.2
2,350,145	-		LRK53_RS10515	0.66	-0.5
2,350,479	+				-0.8
2,350,479	+				+0.4
2,350,479	+				-0.2
2,350,480	-				+2.6
2,350,480	-				+0.3
2,350,480	-				-0.5
2,350,480	-				+0.3
2,350,480	-				-0.3
2,350,509	+				+1.7
2,350,509	+				-1.7
2,350,510	-				-0.0
2,350,510	-				+0.7
2,350,553	-				+0.4
2,350,626	+				+0.6
2,350,626	+				+0.7
2,350,626	+				-0.0
2,350,626	+				-0.4
2,350,626	+				-0.9
2,350,626	+				-1.0
2,350,627	-				-0.9
2,350,627	-				-1.2
2,350,627	-				+1.1
2,350,760	+		LRK53_RS10525	0.12	-0.1
2,350,760	+		LRK53_RS10525	0.12	-1.0
2,350,760	+		LRK53_RS10525	0.12	+0.3
2,350,761	-		LRK53_RS10525	0.12	-2.4
2,350,761	-		LRK53_RS10525	0.12	+0.4
2,350,761	-		LRK53_RS10525	0.12	-0.0
2,350,761	-		LRK53_RS10525	0.12	-0.9
2,350,761	-		LRK53_RS10525	0.12	-0.3