Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS10485

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
2,343,709	+		LRK53_RS10475	0.85	+0.4
2,343,710	-		LRK53_RS10475	0.85	-0.3
2,343,716	+		LRK53_RS10475	0.85	-1.2
2,343,717	-		LRK53_RS10475	0.86	-1.7
2,343,717	-		LRK53_RS10475	0.86	+0.2
2,343,717	-		LRK53_RS10475	0.86	-1.3
2,343,800	-				-0.9
2,343,812	+				-1.0
2,343,813	-				-2.3
2,343,813	-				-0.0
2,343,839	+				-0.4
2,343,921	+				-0.9
2,343,978	+				-0.3
2,343,979	-				-2.0
2,343,979	-				-0.9
2,344,015	+				-1.8
2,344,053	-				-0.3
2,344,306	+		LRK53_RS10480	0.66	-0.9
2,344,306	+		LRK53_RS10480	0.66	+3.1
2,344,306	+		LRK53_RS10480	0.66	-1.3
2,344,306	+		LRK53_RS10480	0.66	-1.0
2,344,307	-		LRK53_RS10480	0.67	-0.2
2,344,307	-		LRK53_RS10480	0.67	+0.9
2,344,307	-		LRK53_RS10480	0.67	-1.0
2,344,307	-		LRK53_RS10480	0.67	-0.7
2,344,307	-		LRK53_RS10480	0.67	+0.1
2,344,322	+		LRK53_RS10480	0.70	-2.6
2,344,323	-		LRK53_RS10480	0.71	-0.9
2,344,404	+				-0.7
2,344,404	+				-2.1
2,344,404	+				+0.1
2,344,405	-				+0.1
2,344,405	-				+0.1
2,344,422	+				-1.2
2,344,423	-				-1.6
2,344,423	-				-0.8
2,344,571	+				-0.3
2,344,572	-				-0.9
2,344,572	-				+0.1
2,344,676	+				-0.4
2,344,677	-				-0.7
2,344,677	-				-2.3
2,344,785	+		LRK53_RS10485	0.20	-0.4
2,344,785	+		LRK53_RS10485	0.20	-2.9
2,344,785	+		LRK53_RS10485	0.20	-0.4
2,344,786	-		LRK53_RS10485	0.21	-1.7
2,344,786	-		LRK53_RS10485	0.21	-3.4
2,344,805	+		LRK53_RS10485	0.24	+0.1
2,344,806	-		LRK53_RS10485	0.24	-0.9
2,344,862	+		LRK53_RS10485	0.35	-0.0
2,344,862	+		LRK53_RS10485	0.35	-0.2
2,344,890	+		LRK53_RS10485	0.40	-1.4
2,344,890	+		LRK53_RS10485	0.40	-1.9
2,344,917	+		LRK53_RS10485	0.45	-1.6
2,344,984	-		LRK53_RS10485	0.58	-0.5
2,344,984	-		LRK53_RS10485	0.58	-0.1
2,345,032	+		LRK53_RS10485	0.67	+1.1
2,345,073	+		LRK53_RS10485	0.75	-1.4
2,345,073	+		LRK53_RS10485	0.75	+0.1
2,345,074	-		LRK53_RS10485	0.75	-2.0
2,345,074	-		LRK53_RS10485	0.75	-1.3
2,345,074	-		LRK53_RS10485	0.75	-0.6
2,345,083	+		LRK53_RS10485	0.76	-0.9
2,345,083	+		LRK53_RS10485	0.76	-0.7
2,345,083	+		LRK53_RS10485	0.76	-0.3
2,345,084	-		LRK53_RS10485	0.77	+0.1
2,345,084	-		LRK53_RS10485	0.77	-3.0
2,345,149	+		LRK53_RS10485	0.89	-0.2
2,345,150	-		LRK53_RS10485	0.89	-0.9
2,345,150	-		LRK53_RS10485	0.89	+2.1
2,345,214	-				-1.3
2,345,214	-				-1.1
2,345,236	+				-1.5
2,345,236	+				-0.2
2,345,236	+				-0.3
2,345,236	+				-1.2
2,345,236	+				-1.1
2,345,237	-				+0.8
2,345,237	-				+0.1
2,345,237	-				+2.1
2,345,237	-				+0.3
2,345,237	-				-0.0
2,345,246	-				+0.6
2,345,246	-				-1.2
2,345,274	-				-1.4
2,345,419	+		LRK53_RS10490	0.18	-0.3
2,345,495	+		LRK53_RS10490	0.25	-0.9
2,345,495	+		LRK53_RS10490	0.25	+0.7
2,345,495	+		LRK53_RS10490	0.25	+0.3
2,345,496	-		LRK53_RS10490	0.25	-2.7
2,345,496	-		LRK53_RS10490	0.25	+1.1
2,345,496	-		LRK53_RS10490	0.25	-0.7
2,345,513	+		LRK53_RS10490	0.27	-0.3
2,345,514	-		LRK53_RS10490	0.27	-1.4
2,345,514	-		LRK53_RS10490	0.27	-0.0
2,345,514	-		LRK53_RS10490	0.27	+0.0
2,345,548	-		LRK53_RS10490	0.30	+2.7
2,345,616	+		LRK53_RS10490	0.37	-0.7
2,345,616	+		LRK53_RS10490	0.37	-0.6
2,345,617	-		LRK53_RS10490	0.37	-1.7
2,345,617	-		LRK53_RS10490	0.37	-1.4
2,345,635	+		LRK53_RS10490	0.39	-3.0
2,345,635	+		LRK53_RS10490	0.39	-1.2
2,345,636	-		LRK53_RS10490	0.39	-0.2
2,345,652	+		LRK53_RS10490	0.40	-0.4
2,345,653	-		LRK53_RS10490	0.40	-0.3
2,345,653	-		LRK53_RS10490	0.40	-1.2
2,345,668	+		LRK53_RS10490	0.42	-0.4
2,345,669	-		LRK53_RS10490	0.42	+0.9
2,345,669	-		LRK53_RS10490	0.42	-1.4
2,345,669	-		LRK53_RS10490	0.42	-0.5
2,345,684	+		LRK53_RS10490	0.43	-1.6
2,345,685	-		LRK53_RS10490	0.43	-0.4
2,345,685	-		LRK53_RS10490	0.43	-2.7
2,345,687	+		LRK53_RS10490	0.44	-1.2
2,345,742	-		LRK53_RS10490	0.49	-0.8
2,345,774	+		LRK53_RS10490	0.52	-0.6
2,345,775	-		LRK53_RS10490	0.52	-0.1
2,345,775	-		LRK53_RS10490	0.52	-0.2
2,345,775	-		LRK53_RS10490	0.52	-0.0
2,345,775	-		LRK53_RS10490	0.52	+0.4
2,345,775	-		LRK53_RS10490	0.52	-0.3
2,345,775	-		LRK53_RS10490	0.52	+2.9
2,345,837	+		LRK53_RS10490	0.58	-1.4
2,345,847	+		LRK53_RS10490	0.59	-0.1
2,345,847	+		LRK53_RS10490	0.59	+0.7
2,345,847	+		LRK53_RS10490	0.59	-1.3
2,345,847	+		LRK53_RS10490	0.59	-0.2
2,345,860	+		LRK53_RS10490	0.60	-0.2
2,345,861	-		LRK53_RS10490	0.60	-0.4
2,345,864	+		LRK53_RS10490	0.61	+0.4
2,345,864	+		LRK53_RS10490	0.61	+1.1
2,345,864	+		LRK53_RS10490	0.61	+1.1
2,345,864	+		LRK53_RS10490	0.61	+0.4
2,345,864	+		LRK53_RS10490	0.61	-0.2
2,345,864	+		LRK53_RS10490	0.61	+0.7
2,345,963	+		LRK53_RS10490	0.70	-1.9
2,345,963	+		LRK53_RS10490	0.70	+0.1
2,345,963	+		LRK53_RS10490	0.70	-2.4
2,345,963	+		LRK53_RS10490	0.70	-1.1
2,345,963	+		LRK53_RS10490	0.70	-0.9
2,345,963	+		LRK53_RS10490	0.70	-1.8
2,345,963	+		LRK53_RS10490	0.70	+0.1
2,345,963	+		LRK53_RS10490	0.70	+0.6
2,345,963	+		LRK53_RS10490	0.70	-0.8
2,345,963	+		LRK53_RS10490	0.70	+1.7
2,345,963	+		LRK53_RS10490	0.70	-1.4
2,345,963	+		LRK53_RS10490	0.70	+0.4
2,345,963	+		LRK53_RS10490	0.70	-0.4
2,345,963	+		LRK53_RS10490	0.70	-0.6
2,345,963	+		LRK53_RS10490	0.70	+1.1
2,345,964	-		LRK53_RS10490	0.70	-1.7
2,345,964	-		LRK53_RS10490	0.70	+0.1
2,345,964	-		LRK53_RS10490	0.70	-1.2
2,345,964	-		LRK53_RS10490	0.70	-2.9
2,345,964	-		LRK53_RS10490	0.70	+0.6
2,345,964	-		LRK53_RS10490	0.70	-0.2
2,345,964	-		LRK53_RS10490	0.70	+0.1
2,345,964	-		LRK53_RS10490	0.70	-0.3
2,345,964	-		LRK53_RS10490	0.70	-1.4
2,345,964	-		LRK53_RS10490	0.70	-1.2
2,345,964	-		LRK53_RS10490	0.70	+1.1
2,345,964	-		LRK53_RS10490	0.70	+0.3
2,345,964	-		LRK53_RS10490	0.70	+0.1
2,346,004	+		LRK53_RS10490	0.74	-0.4
2,346,004	+		LRK53_RS10490	0.74	-1.7
2,346,005	-		LRK53_RS10490	0.74	-0.6
2,346,152	+		LRK53_RS10490	0.89	-0.2
2,346,152	+		LRK53_RS10490	0.89	+0.2
2,346,152	+		LRK53_RS10490	0.89	-0.9
2,346,152	+		LRK53_RS10490	0.89	-0.5
2,346,152	+		LRK53_RS10490	0.89	-1.2
2,346,152	+		LRK53_RS10490	0.89	+2.1
2,346,152	+		LRK53_RS10490	0.89	-1.4
2,346,152	+		LRK53_RS10490	0.89	+2.5
2,346,152	+		LRK53_RS10490	0.89	-0.1
2,346,152	+		LRK53_RS10490	0.89	-2.0
2,346,152	+		LRK53_RS10490	0.89	+0.7
2,346,152	+		LRK53_RS10490	0.89	+0.5
2,346,152	+		LRK53_RS10490	0.89	-1.3
2,346,153	-		LRK53_RS10490	0.89	-2.9
2,346,153	-		LRK53_RS10490	0.89	-2.4
2,346,153	-		LRK53_RS10490	0.89	+0.6
2,346,153	-		LRK53_RS10490	0.89	+0.4
2,346,153	-		LRK53_RS10490	0.89	+0.6
2,346,153	-		LRK53_RS10490	0.89	-0.3
2,346,153	-		LRK53_RS10490	0.89	+0.4
2,346,153	-		LRK53_RS10490	0.89	-0.9
2,346,177	+				+0.4
2,346,178	-				-1.2