Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS10460

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
2,336,793	+				-1.4
2,336,793	+				-1.7
2,336,793	+				-1.5
2,336,793	+				+0.6
2,336,793	+				-2.4
2,336,793	+				-0.1
2,336,793	+				-1.0
2,336,793	+				-0.1
2,336,793	+				+0.6
2,336,793	+				-1.0
2,336,793	+				-0.7
2,336,793	+				-0.9
2,336,793	+				-0.7
2,336,794	-				-1.0
2,336,794	-				-1.0
2,336,794	-				-2.3
2,336,794	-				-0.3
2,336,794	-				-1.2
2,337,282	+		LRK53_RS10455	0.58	-0.1
2,337,311	+		LRK53_RS10455	0.61	-0.3
2,337,311	+		LRK53_RS10455	0.61	+1.6
2,337,311	+		LRK53_RS10455	0.61	-1.2
2,337,311	+		LRK53_RS10455	0.61	-0.9
2,337,311	+		LRK53_RS10455	0.61	-0.1
2,337,311	+		LRK53_RS10455	0.61	+1.1
2,337,311	+		LRK53_RS10455	0.61	+0.6
2,337,311	+		LRK53_RS10455	0.61	-0.2
2,337,311	+		LRK53_RS10455	0.61	+0.5
2,337,311	+		LRK53_RS10455	0.61	+0.4
2,337,311	+		LRK53_RS10455	0.61	-1.2
2,337,311	+		LRK53_RS10455	0.61	+0.1
2,337,311	+		LRK53_RS10455	0.61	-1.7
2,337,311	+		LRK53_RS10455	0.61	-0.3
2,337,312	-		LRK53_RS10455	0.61	-1.4
2,337,312	-		LRK53_RS10455	0.61	+0.6
2,337,312	-		LRK53_RS10455	0.61	-2.3
2,337,312	-		LRK53_RS10455	0.61	+1.1
2,337,312	-		LRK53_RS10455	0.61	-0.3
2,337,312	-		LRK53_RS10455	0.61	-1.2
2,337,312	-		LRK53_RS10455	0.61	-0.0
2,337,312	-		LRK53_RS10455	0.61	-0.9
2,337,398	+		LRK53_RS10455	0.72	-1.3
2,337,398	+		LRK53_RS10455	0.72	-1.2
2,337,398	+		LRK53_RS10455	0.72	-0.6
2,337,398	+		LRK53_RS10455	0.72	+0.7
2,337,398	+		LRK53_RS10455	0.72	-0.0
2,337,399	-		LRK53_RS10455	0.72	+0.1
2,337,399	-		LRK53_RS10455	0.72	-1.4
2,337,399	-		LRK53_RS10455	0.72	+1.1
2,337,399	-		LRK53_RS10455	0.72	-0.2
2,337,572	+				-0.3
2,337,572	+				+1.1
2,337,572	+				+0.4
2,337,572	+				+0.5
2,337,572	+				+1.8
2,337,572	+				-0.2
2,337,572	+				+0.7
2,337,572	+				+0.1
2,337,572	+				-2.0
2,337,572	+				+1.1
2,337,572	+				-0.4
2,337,572	+				+0.1
2,337,573	-				+1.1
2,337,573	-				-1.3
2,337,573	-				-1.9
2,337,573	-				-0.8
2,337,573	-				-1.2
2,337,573	-				-0.1
2,337,573	-				+0.1
2,337,573	-				-2.0
2,337,573	-				-0.9
2,337,573	-				-1.0
2,337,573	-				-2.0
2,337,573	-				-1.2
2,337,573	-				-0.6
2,337,573	-				+0.6
2,337,898	+				+0.0
2,337,898	+				-0.3
2,337,898	+				+0.6
2,337,898	+				-0.9
2,337,898	+				-0.2
2,337,898	+				-1.2
2,337,898	+				-0.7
2,337,898	+				-0.4
2,337,898	+				-0.4
2,337,898	+				-1.4
2,337,898	+				-0.4
2,337,898	+				-2.9
2,337,899	-				-1.7
2,337,899	-				-0.4
2,337,899	-				+3.3
2,337,899	-				-2.2
2,337,899	-				+1.1
2,337,899	-				-0.4
2,337,899	-				-0.9
2,337,911	+		LRK53_RS10460	0.10	+0.1
2,337,911	+		LRK53_RS10460	0.10	+1.1
2,337,912	-		LRK53_RS10460	0.10	+0.6
2,337,912	-		LRK53_RS10460	0.10	-0.2
2,337,912	-		LRK53_RS10460	0.10	-1.2
2,337,912	-		LRK53_RS10460	0.10	-2.0
2,338,249	+		LRK53_RS10460	0.23	-0.2
2,338,249	+		LRK53_RS10460	0.23	-2.5
2,338,250	-		LRK53_RS10460	0.23	+0.7
2,338,250	-		LRK53_RS10460	0.23	-1.0
2,338,250	-		LRK53_RS10460	0.23	+0.1
2,338,341	+		LRK53_RS10460	0.26	-1.1
2,338,341	+		LRK53_RS10460	0.26	-2.7
2,338,341	+		LRK53_RS10460	0.26	-0.4
2,338,341	+		LRK53_RS10460	0.26	-1.7
2,338,342	-		LRK53_RS10460	0.26	-1.9
2,338,342	-		LRK53_RS10460	0.26	-1.0
2,338,342	-		LRK53_RS10460	0.26	-1.0
2,338,342	-		LRK53_RS10460	0.26	-0.8
2,338,342	-		LRK53_RS10460	0.26	-0.1
2,338,342	-		LRK53_RS10460	0.26	-1.0
2,338,342	-		LRK53_RS10460	0.26	-0.8
2,338,415	+		LRK53_RS10460	0.29	-1.4
2,338,711	+		LRK53_RS10460	0.39	-0.9
2,338,913	+		LRK53_RS10460	0.47	-1.7
2,338,913	+		LRK53_RS10460	0.47	-0.8
2,338,913	+		LRK53_RS10460	0.47	-1.4
2,338,913	+		LRK53_RS10460	0.47	+0.1
2,338,914	-		LRK53_RS10460	0.47	-0.3
2,338,914	-		LRK53_RS10460	0.47	-0.4
2,338,914	-		LRK53_RS10460	0.47	-1.4
2,338,914	-		LRK53_RS10460	0.47	-0.2
2,338,914	-		LRK53_RS10460	0.47	-1.9
2,338,914	-		LRK53_RS10460	0.47	-0.9
2,338,914	-		LRK53_RS10460	0.47	+0.1
2,338,914	-		LRK53_RS10460	0.47	-1.2
2,338,914	-		LRK53_RS10460	0.47	+0.1
2,338,914	-		LRK53_RS10460	0.47	-0.2
2,338,914	-		LRK53_RS10460	0.47	-1.6
2,339,158	+		LRK53_RS10460	0.56	-0.2
2,339,159	-		LRK53_RS10460	0.56	-0.4
2,339,159	-		LRK53_RS10460	0.56	+1.1
2,339,159	-		LRK53_RS10460	0.56	-1.0
2,339,273	+		LRK53_RS10460	0.60	+0.1
2,339,274	-		LRK53_RS10460	0.60	-0.9
2,339,351	+		LRK53_RS10460	0.63	-1.3
2,339,392	+		LRK53_RS10460	0.64	+1.1
2,339,392	+		LRK53_RS10460	0.64	-2.3
2,339,393	-		LRK53_RS10460	0.64	+0.8
2,339,393	-		LRK53_RS10460	0.64	-0.0
2,339,434	+		LRK53_RS10460	0.66	-1.9
2,339,434	+		LRK53_RS10460	0.66	+0.5
2,339,434	+		LRK53_RS10460	0.66	+0.6
2,339,434	+		LRK53_RS10460	0.66	+2.1
2,339,435	-		LRK53_RS10460	0.66	+0.3
2,339,435	-		LRK53_RS10460	0.66	-2.4
2,339,435	-		LRK53_RS10460	0.66	+0.1
2,339,435	-		LRK53_RS10460	0.66	+0.4
2,339,435	-		LRK53_RS10460	0.66	+0.1
2,339,461	+		LRK53_RS10460	0.67	-1.3
2,339,461	+		LRK53_RS10460	0.67	-2.8
2,339,462	-		LRK53_RS10460	0.67	-1.6
2,339,491	+		LRK53_RS10460	0.68	+1.1
2,339,491	+		LRK53_RS10460	0.68	-0.7
2,339,492	-		LRK53_RS10460	0.68	+0.4
2,339,492	-		LRK53_RS10460	0.68	+0.8
2,339,492	-		LRK53_RS10460	0.68	-0.7
2,339,647	+		LRK53_RS10460	0.74	+1.5
2,339,647	+		LRK53_RS10460	0.74	-1.2
2,339,647	+		LRK53_RS10460	0.74	-0.7
2,339,647	+		LRK53_RS10460	0.74	-0.9
2,339,647	+		LRK53_RS10460	0.74	-0.7
2,339,648	-		LRK53_RS10460	0.74	-1.8
2,339,648	-		LRK53_RS10460	0.74	+0.1
2,339,648	-		LRK53_RS10460	0.74	-2.7
2,339,668	+		LRK53_RS10460	0.74	-0.9
2,339,668	+		LRK53_RS10460	0.74	-1.9
2,339,668	+		LRK53_RS10460	0.74	-1.8
2,339,669	-		LRK53_RS10460	0.74	+1.6
2,339,669	-		LRK53_RS10460	0.74	+0.7
2,339,881	+		LRK53_RS10460	0.82	-0.4
2,339,881	+		LRK53_RS10460	0.82	+0.6
2,339,881	+		LRK53_RS10460	0.82	+1.1
2,339,881	+		LRK53_RS10460	0.82	-0.3
2,339,881	+		LRK53_RS10460	0.82	+0.1
2,339,882	-		LRK53_RS10460	0.82	-1.2
2,339,932	+		LRK53_RS10460	0.84	-0.9
2,339,932	+		LRK53_RS10460	0.84	+1.1
2,339,932	+		LRK53_RS10460	0.84	+0.1
2,339,933	-		LRK53_RS10460	0.84	-2.7
2,339,933	-		LRK53_RS10460	0.84	-0.4
2,340,043	+		LRK53_RS10460	0.88	+2.5
2,340,043	+		LRK53_RS10460	0.88	+0.1
2,340,043	+		LRK53_RS10460	0.88	-1.7
2,340,044	-		LRK53_RS10460	0.88	+1.6
2,340,044	-		LRK53_RS10460	0.88	-1.0
2,340,044	-		LRK53_RS10460	0.88	+0.6
2,340,281	+				+0.8
2,340,281	+				+1.1
2,340,282	-				-1.2
2,340,393	+				+1.7
2,340,393	+				-1.1
2,340,393	+				-2.3
2,340,393	+				-0.3
2,340,394	-				-0.0
2,340,394	-				-1.4
2,340,456	+				-1.2
2,340,477	+		LRK53_RS10465	0.10	-1.2
2,340,477	+		LRK53_RS10465	0.10	-1.4
2,340,478	-		LRK53_RS10465	0.10	+1.1
2,340,478	-		LRK53_RS10465	0.10	-0.9
2,340,588	+		LRK53_RS10465	0.20	-1.0
2,340,589	-		LRK53_RS10465	0.20	-0.4
2,340,589	-		LRK53_RS10465	0.20	-0.1
2,340,589	-		LRK53_RS10465	0.20	-0.6
2,340,653	+		LRK53_RS10465	0.26	-1.2
2,340,653	+		LRK53_RS10465	0.26	+0.5
2,340,653	+		LRK53_RS10465	0.26	-2.1
2,340,653	+		LRK53_RS10465	0.26	-0.9
2,340,654	-		LRK53_RS10465	0.26	-1.1
2,340,666	+		LRK53_RS10465	0.27	+1.1
2,340,666	+		LRK53_RS10465	0.27	-1.9
2,340,666	+		LRK53_RS10465	0.27	-1.7
2,340,666	+		LRK53_RS10465	0.27	+1.1
2,340,666	+		LRK53_RS10465	0.27	+0.7
2,340,666	+		LRK53_RS10465	0.27	+0.1
2,340,666	+		LRK53_RS10465	0.27	-1.7
2,340,666	+		LRK53_RS10465	0.27	+2.7
2,340,666	+		LRK53_RS10465	0.27	-0.9
2,340,666	+		LRK53_RS10465	0.27	-1.7
2,340,667	-		LRK53_RS10465	0.27	+0.1
2,340,667	-		LRK53_RS10465	0.27	+0.6
2,340,667	-		LRK53_RS10465	0.27	-0.4
2,340,667	-		LRK53_RS10465	0.27	+0.3
2,340,667	-		LRK53_RS10465	0.27	+1.1
2,340,667	-		LRK53_RS10465	0.27	+0.1
2,340,667	-		LRK53_RS10465	0.27	-0.9
2,340,667	-		LRK53_RS10465	0.27	-2.4
2,340,667	-		LRK53_RS10465	0.27	-1.5
2,340,667	-		LRK53_RS10465	0.27	-0.2
2,340,667	-		LRK53_RS10465	0.27	+0.7
2,340,667	-		LRK53_RS10465	0.27	+0.9
2,340,771	+		LRK53_RS10465	0.36	+1.1
2,340,771	+		LRK53_RS10465	0.36	-2.6
2,340,771	+		LRK53_RS10465	0.36	+1.1
2,340,771	+		LRK53_RS10465	0.36	-0.3
2,340,772	-		LRK53_RS10465	0.36	-0.3
2,340,772	-		LRK53_RS10465	0.36	-0.7
2,340,772	-		LRK53_RS10465	0.36	-2.4
2,340,772	-		LRK53_RS10465	0.36	+0.3
2,340,772	-		LRK53_RS10465	0.36	-0.4
2,341,099	+		LRK53_RS10465	0.65	+0.6
2,341,100	-		LRK53_RS10465	0.65	+1.1
2,341,100	-		LRK53_RS10465	0.65	-1.4