Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS10345

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
2,311,268	-		LRK53_RS10335	0.59	-0.6
2,311,437	+				-0.4
2,311,438	-				-0.4
2,311,605	+		LRK53_RS10340	0.15	-0.4
2,311,707	+		LRK53_RS10340	0.32	-0.9
2,311,707	+		LRK53_RS10340	0.32	+0.6
2,311,707	+		LRK53_RS10340	0.32	+1.4
2,311,780	+		LRK53_RS10340	0.45	+1.3
2,311,780	+		LRK53_RS10340	0.45	-1.9
2,311,820	+		LRK53_RS10340	0.52	-0.1
2,311,820	+		LRK53_RS10340	0.52	-1.3
2,311,820	+		LRK53_RS10340	0.52	-0.2
2,311,821	-		LRK53_RS10340	0.52	-1.5
2,311,821	-		LRK53_RS10340	0.52	+0.6
2,311,821	-		LRK53_RS10340	0.52	+0.9
2,311,821	-		LRK53_RS10340	0.52	-1.7
2,311,826	+		LRK53_RS10340	0.53	-0.4
2,311,826	+		LRK53_RS10340	0.53	+0.1
2,311,826	+		LRK53_RS10340	0.53	+2.1
2,311,827	-		LRK53_RS10340	0.53	-1.4
2,311,827	-		LRK53_RS10340	0.53	+1.1
2,311,827	-		LRK53_RS10340	0.53	-0.5
2,311,827	-		LRK53_RS10340	0.53	-1.7
2,311,827	-		LRK53_RS10340	0.53	+1.1
2,311,827	-		LRK53_RS10340	0.53	-0.5
2,311,827	-		LRK53_RS10340	0.53	+0.6
2,311,970	+		LRK53_RS10340	0.78	-0.1
2,311,971	-		LRK53_RS10340	0.79	-0.6
2,311,971	-		LRK53_RS10340	0.79	-1.2
2,312,022	+		LRK53_RS10340	0.87	-1.0
2,312,022	+		LRK53_RS10340	0.87	-0.4
2,312,022	+		LRK53_RS10340	0.87	-0.4
2,312,022	+		LRK53_RS10340	0.87	-1.0
2,312,056	+				-0.9
2,312,056	+				+0.9
2,312,056	+				+0.1
2,312,056	+				+0.1
2,312,056	+				-1.2
2,312,056	+				-0.5
2,312,056	+				-0.6
2,312,056	+				-0.4
2,312,057	-				-0.5
2,312,057	-				-1.5
2,312,057	-				+2.4
2,312,057	-				+1.1
2,312,057	-				+0.1
2,312,145	-				-0.9
2,312,145	-				-1.2
2,312,145	-				-0.4
2,312,214	+				-1.6
2,312,214	+				+1.5
2,312,214	+				+0.1
2,312,215	-				-1.9
2,312,221	-				-2.4
2,312,250	+				+0.4
2,312,250	+				-1.1
2,312,250	+				+0.5
2,312,250	+				-1.4
2,312,250	+				+1.1
2,312,250	+				+0.2
2,312,250	+				+3.1
2,312,250	+				+0.7
2,312,250	+				-0.4
2,312,251	-				-2.7
2,312,285	+				+0.5
2,312,285	+				+1.1
2,312,286	-				+0.7
2,312,286	-				-0.4
2,312,286	-				+2.1
2,312,385	+				-1.2
2,312,392	-				+0.6
2,312,470	+				+0.1
2,312,471	-				+0.3
2,312,471	-				+1.4
2,312,471	-				-2.6
2,312,471	-				+0.6
2,312,527	+		LRK53_RS10345	0.12	-0.9
2,312,527	+		LRK53_RS10345	0.12	-0.6
2,312,527	+		LRK53_RS10345	0.12	-2.2
2,312,528	-		LRK53_RS10345	0.12	-0.1
2,312,641	-		LRK53_RS10345	0.16	-2.0
2,312,693	+		LRK53_RS10345	0.19	-0.5
2,312,693	+		LRK53_RS10345	0.19	+0.6
2,312,693	+		LRK53_RS10345	0.19	+0.6
2,312,693	+		LRK53_RS10345	0.19	-0.4
2,312,694	-		LRK53_RS10345	0.19	-0.7
2,312,694	-		LRK53_RS10345	0.19	+1.1
2,312,694	-		LRK53_RS10345	0.19	-1.9
2,312,742	+		LRK53_RS10345	0.21	-1.2
2,312,744	+		LRK53_RS10345	0.21	-0.9
2,312,744	+		LRK53_RS10345	0.21	-0.2
2,312,744	+		LRK53_RS10345	0.21	-1.4
2,312,745	-		LRK53_RS10345	0.21	+0.8
2,312,745	-		LRK53_RS10345	0.21	-1.6
2,312,745	-		LRK53_RS10345	0.21	+0.6
2,312,785	+		LRK53_RS10345	0.22	+1.1
2,312,785	+		LRK53_RS10345	0.22	-0.8
2,312,785	+		LRK53_RS10345	0.22	-0.9
2,312,785	+		LRK53_RS10345	0.22	-1.9
2,312,786	-		LRK53_RS10345	0.23	+1.1
2,313,038	+		LRK53_RS10345	0.33	-1.4
2,313,038	+		LRK53_RS10345	0.33	-1.6
2,313,038	+		LRK53_RS10345	0.33	-0.4
2,313,038	+		LRK53_RS10345	0.33	+0.9
2,313,038	+		LRK53_RS10345	0.33	-2.0
2,313,038	+		LRK53_RS10345	0.33	-0.2
2,313,039	-		LRK53_RS10345	0.33	-0.4
2,313,039	-		LRK53_RS10345	0.33	+0.3
2,313,039	-		LRK53_RS10345	0.33	+0.6
2,313,040	+		LRK53_RS10345	0.33	+0.6
2,313,040	+		LRK53_RS10345	0.33	+0.1
2,313,040	+		LRK53_RS10345	0.33	-1.9
2,313,040	+		LRK53_RS10345	0.33	+0.3
2,313,041	-		LRK53_RS10345	0.33	+1.1
2,313,041	-		LRK53_RS10345	0.33	-0.3
2,313,041	-		LRK53_RS10345	0.33	-1.5
2,313,068	+		LRK53_RS10345	0.34	-1.2
2,313,068	+		LRK53_RS10345	0.34	+0.6
2,313,068	+		LRK53_RS10345	0.34	-0.4
2,313,069	-		LRK53_RS10345	0.35	-1.3
2,313,069	-		LRK53_RS10345	0.35	-1.2
2,313,165	+		LRK53_RS10345	0.39	-0.2
2,313,278	+		LRK53_RS10345	0.43	+0.4
2,313,360	-		LRK53_RS10345	0.47	+0.6
2,313,360	-		LRK53_RS10345	0.47	-1.7
2,313,490	-		LRK53_RS10345	0.52	-1.7
2,313,665	+		LRK53_RS10345	0.60	+1.0
2,313,666	-		LRK53_RS10345	0.60	+1.1
2,313,909	+		LRK53_RS10345	0.70	+0.3
2,313,909	+		LRK53_RS10345	0.70	-0.9
2,313,910	-		LRK53_RS10345	0.70	+0.1
2,314,084	+		LRK53_RS10345	0.78	+3.5
2,314,084	+		LRK53_RS10345	0.78	-0.2
2,314,084	+		LRK53_RS10345	0.78	-0.4
2,314,085	-		LRK53_RS10345	0.78	+0.6
2,314,117	-		LRK53_RS10345	0.79	+0.1
2,314,117	-		LRK53_RS10345	0.79	+0.1
2,314,117	-		LRK53_RS10345	0.79	+0.7
2,314,153	+		LRK53_RS10345	0.80	+0.0
2,314,153	+		LRK53_RS10345	0.80	-1.0
2,314,153	+		LRK53_RS10345	0.80	+0.8
2,314,153	+		LRK53_RS10345	0.80	-0.3
2,314,153	+		LRK53_RS10345	0.80	-0.4
2,314,153	+		LRK53_RS10345	0.80	+0.1
2,314,153	+		LRK53_RS10345	0.80	+1.5
2,314,153	+		LRK53_RS10345	0.80	-0.6
2,314,153	+		LRK53_RS10345	0.80	-0.6
2,314,154	-		LRK53_RS10345	0.80	-0.9
2,314,154	-		LRK53_RS10345	0.80	-0.2
2,314,154	-		LRK53_RS10345	0.80	+0.0
2,314,154	-		LRK53_RS10345	0.80	+0.4
2,314,154	-		LRK53_RS10345	0.80	-0.3
2,314,154	-		LRK53_RS10345	0.80	+1.5
2,314,154	-		LRK53_RS10345	0.80	+0.1
2,314,154	-		LRK53_RS10345	0.80	-0.7
2,314,154	-		LRK53_RS10345	0.80	-0.7
2,314,154	-		LRK53_RS10345	0.80	+1.1
2,314,222	+		LRK53_RS10345	0.83	-1.8
2,314,222	+		LRK53_RS10345	0.83	-1.0
2,314,222	+		LRK53_RS10345	0.83	+3.5
2,314,222	+		LRK53_RS10345	0.83	-1.6
2,314,241	+		LRK53_RS10345	0.84	-1.0
2,314,241	+		LRK53_RS10345	0.84	-0.4
2,314,256	+		LRK53_RS10345	0.85	-0.2
2,314,256	+		LRK53_RS10345	0.85	-0.9
2,314,256	+		LRK53_RS10345	0.85	-0.9
2,314,256	+		LRK53_RS10345	0.85	+0.5
2,314,256	+		LRK53_RS10345	0.85	-0.4
2,314,256	+		LRK53_RS10345	0.85	+1.1
2,314,256	+		LRK53_RS10345	0.85	+1.0
2,314,256	+		LRK53_RS10345	0.85	+0.1
2,314,256	+		LRK53_RS10345	0.85	+2.1
2,314,257	-		LRK53_RS10345	0.85	+0.6
2,314,257	-		LRK53_RS10345	0.85	-0.4
2,314,257	-		LRK53_RS10345	0.85	-1.0
2,314,257	-		LRK53_RS10345	0.85	+0.3
2,314,257	-		LRK53_RS10345	0.85	+1.1
2,314,262	+		LRK53_RS10345	0.85	+0.1
2,314,262	+		LRK53_RS10345	0.85	-2.7
2,314,263	-		LRK53_RS10345	0.85	+0.0
2,314,399	+				+1.6
2,314,399	+				-1.4
2,314,400	-				-2.0
2,314,587	+				-0.7
2,314,587	+				+1.7
2,314,587	+				+0.6
2,314,588	-				-1.2
2,314,588	-				+0.1
2,314,588	-				-1.4
2,314,650	+				-1.6
2,314,693	+				-0.4
2,314,693	+				-0.4
2,314,694	-				-0.7
2,314,722	+				-1.5
2,314,723	-				+1.9
2,314,723	-				+0.1
2,314,765	+				-0.2
2,314,781	-				-1.5
2,314,781	-				+0.4
2,314,843	+				+0.0
2,314,843	+				-0.6
2,314,843	+				+0.5
2,314,843	+				+0.1
2,314,844	-				-1.2
2,314,844	-				+0.6
2,314,844	-				+0.4
2,314,844	-				+1.1
2,314,844	-				-1.9
2,314,976	+				-0.9
2,314,976	+				-0.9
2,314,976	+				-0.9
2,314,976	+				-1.2
2,314,976	+				-1.4
2,314,976	+				-0.9
2,314,976	+				-2.3
2,314,977	-				-1.4
2,314,977	-				+0.4
2,314,977	-				-1.2
2,314,977	-				+0.3
2,314,977	-				-1.4
2,315,041	+				-2.2
2,315,041	+				+2.7
2,315,041	+				+2.1
2,315,041	+				-1.2
2,315,041	+				-0.3
2,315,041	+				-1.2
2,315,042	-				-0.4
2,315,042	-				+1.1
2,315,042	-				-0.7
2,315,042	-				+0.7
2,315,140	+		LRK53_RS10350	0.13	-0.1
2,315,140	+		LRK53_RS10350	0.13	-1.7
2,315,141	-		LRK53_RS10350	0.13	+0.5
2,315,141	-		LRK53_RS10350	0.13	-0.6
2,315,209	+		LRK53_RS10350	0.15	-2.0
2,315,210	-		LRK53_RS10350	0.15	-0.4
2,315,448	+		LRK53_RS10350	0.23	-1.4
2,315,448	+		LRK53_RS10350	0.23	+0.1
2,315,522	-		LRK53_RS10350	0.26	+1.1
2,315,522	-		LRK53_RS10350	0.26	-1.3
2,315,522	-		LRK53_RS10350	0.26	-1.7
2,315,559	+		LRK53_RS10350	0.27	-0.1
2,315,559	+		LRK53_RS10350	0.27	-0.9
2,315,559	+		LRK53_RS10350	0.27	-0.9
2,315,559	+		LRK53_RS10350	0.27	-1.0
2,315,559	+		LRK53_RS10350	0.27	-2.9
2,315,611	-		LRK53_RS10350	0.29	+1.1
2,315,611	-		LRK53_RS10350	0.29	-0.4