Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS10160

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
2,269,028	-		LRK53_RS10150	0.63	+2.9
2,269,041	+		LRK53_RS10150	0.64	+1.9
2,269,041	+		LRK53_RS10150	0.64	-1.3
2,269,041	+		LRK53_RS10150	0.64	-0.0
2,269,042	-		LRK53_RS10150	0.64	+0.0
2,269,101	+		LRK53_RS10150	0.68	+1.3
2,269,101	+		LRK53_RS10150	0.68	-0.7
2,269,102	-		LRK53_RS10150	0.68	-0.2
2,269,139	-		LRK53_RS10150	0.70	+0.3
2,269,176	+		LRK53_RS10150	0.73	-0.9
2,269,176	+		LRK53_RS10150	0.73	-0.1
2,269,177	-		LRK53_RS10150	0.73	-0.6
2,269,177	-		LRK53_RS10150	0.73	+0.7
2,269,200	+		LRK53_RS10150	0.74	-1.1
2,269,201	-		LRK53_RS10150	0.74	-1.2
2,269,356	+		LRK53_RS10150	0.84	+1.1
2,269,356	+		LRK53_RS10150	0.84	-0.0
2,269,357	-		LRK53_RS10150	0.84	-1.0
2,269,372	-		LRK53_RS10150	0.85	+0.3
2,269,372	-		LRK53_RS10150	0.85	+1.3
2,269,372	-		LRK53_RS10150	0.85	-0.0
2,269,372	-		LRK53_RS10150	0.85	-0.6
2,269,372	-		LRK53_RS10150	0.85	+0.7
2,269,425	+		LRK53_RS10150	0.89	-0.6
2,269,425	+		LRK53_RS10150	0.89	+0.5
2,269,425	+		LRK53_RS10150	0.89	-0.6
2,269,425	+		LRK53_RS10150	0.89	-1.5
2,269,425	+		LRK53_RS10150	0.89	+0.1
2,269,425	+		LRK53_RS10150	0.89	-0.7
2,269,425	+		LRK53_RS10150	0.89	-0.4
2,269,425	+		LRK53_RS10150	0.89	+0.3
2,269,426	-		LRK53_RS10150	0.89	-1.3
2,269,426	-		LRK53_RS10150	0.89	+0.7
2,269,426	-		LRK53_RS10150	0.89	+0.3
2,269,426	-		LRK53_RS10150	0.89	+1.3
2,269,426	-		LRK53_RS10150	0.89	-0.9
2,269,426	-		LRK53_RS10150	0.89	-1.0
2,269,426	-		LRK53_RS10150	0.89	+0.3
2,269,426	-		LRK53_RS10150	0.89	-1.6
2,269,426	-		LRK53_RS10150	0.89	-0.4
2,269,426	-		LRK53_RS10150	0.89	-0.6
2,269,426	-		LRK53_RS10150	0.89	+1.0
2,269,426	-		LRK53_RS10150	0.89	-0.2
2,269,426	-		LRK53_RS10150	0.89	+1.3
2,269,426	-		LRK53_RS10150	0.89	-1.5
2,269,448	-				-0.4
2,269,495	+				+0.7
2,269,495	+				-1.0
2,269,496	-				-0.7
2,269,496	-				-1.9
2,269,496	-				-1.5
2,269,506	+				+3.1
2,269,507	-				-1.1
2,269,663	+				-0.5
2,269,663	+				-1.1
2,269,663	+				+0.6
2,269,663	+				-0.9
2,269,663	+				+1.3
2,269,664	-				-0.3
2,269,664	-				-0.1
2,269,664	-				+0.3
2,269,664	-				-2.7
2,269,665	+				-0.0
2,269,665	+				-0.1
2,269,665	+				+0.4
2,269,666	-				-1.6
2,269,666	-				-0.5
2,269,717	+		LRK53_RS10155	0.22	-0.4
2,269,717	+		LRK53_RS10155	0.22	+0.3
2,269,717	+		LRK53_RS10155	0.22	-0.2
2,269,717	+		LRK53_RS10155	0.22	-0.6
2,269,718	-		LRK53_RS10155	0.23	+0.4
2,269,718	-		LRK53_RS10155	0.23	+0.3
2,269,718	-		LRK53_RS10155	0.23	-0.0
2,269,718	-		LRK53_RS10155	0.23	+0.2
2,269,718	-		LRK53_RS10155	0.23	+0.6
2,269,808	+		LRK53_RS10155	0.47	-0.1
2,269,808	+		LRK53_RS10155	0.47	+0.6
2,269,808	+		LRK53_RS10155	0.47	+1.0
2,269,808	+		LRK53_RS10155	0.47	-0.6
2,269,808	+		LRK53_RS10155	0.47	+0.3
2,269,809	-		LRK53_RS10155	0.48	-1.5
2,269,809	-		LRK53_RS10155	0.48	-0.1
2,269,822	+		LRK53_RS10155	0.51	-0.6
2,269,996	+				-1.3
2,269,996	+				+1.2
2,269,996	+				+1.3
2,269,996	+				-1.0
2,269,996	+				+1.3
2,269,996	+				-1.1
2,269,996	+				+0.6
2,269,997	-				+0.3
2,269,997	-				-1.7
2,269,997	-				-1.2
2,269,997	-				-0.1
2,269,997	-				-1.0
2,269,997	-				+0.3
2,269,997	-				-1.0
2,269,997	-				-0.5
2,270,016	+				-1.6
2,270,017	-				-1.0
2,270,017	-				+1.3
2,270,304	+		LRK53_RS10160	0.75	-0.7
2,270,305	-		LRK53_RS10160	0.75	-0.9
2,270,305	-		LRK53_RS10160	0.75	-1.2
2,270,374	+				-0.3
2,270,374	+				-0.7
2,270,375	-				+0.3
2,270,375	-				-1.9
2,270,375	-				+1.3
2,270,375	-				-1.6
2,270,375	-				+0.1
2,270,375	-				-0.0
2,270,375	-				-0.2
2,270,381	-				-0.5
2,270,381	-				+0.3
2,270,438	+				+1.0
2,270,491	-				-0.1
2,270,548	-				+0.8
2,270,566	+				+0.2
2,270,567	-				+0.0
2,270,567	-				-1.2
2,270,567	-				+0.3
2,270,580	+				-0.0
2,270,580	+				+1.9
2,270,581	-				+0.1
2,270,581	-				-0.1
2,270,581	-				+0.7
2,270,581	-				-0.3
2,270,581	-				-1.3
2,270,581	-				-0.3
2,270,581	-				+0.5
2,270,647	+				-0.0
2,270,647	+				+0.1
2,270,647	+				+0.3
2,270,647	+				-0.4
2,270,647	+				+1.3
2,270,647	+				+0.7
2,270,647	+				+1.3
2,270,647	+				+0.3
2,270,647	+				+0.8
2,270,648	-				-1.2
2,270,703	+				-0.5
2,270,703	+				-0.9
2,270,703	+				+0.6
2,270,704	-				-1.3
2,270,704	-				-1.3
2,270,704	-				-0.2
2,270,704	-				+1.6
2,270,790	+		LRK53_RS10165	0.10	+2.0
2,270,790	+		LRK53_RS10165	0.10	+0.3
2,270,790	+		LRK53_RS10165	0.10	-1.5
2,270,791	-		LRK53_RS10165	0.10	-0.1
2,270,791	-		LRK53_RS10165	0.10	+0.1
2,270,791	-		LRK53_RS10165	0.10	+0.1
2,270,791	-		LRK53_RS10165	0.10	+0.1
2,270,850	+		LRK53_RS10165	0.12	+0.2
2,270,850	+		LRK53_RS10165	0.12	-0.3
2,270,851	-		LRK53_RS10165	0.12	-0.5
2,270,858	+		LRK53_RS10165	0.12	+0.2
2,270,858	+		LRK53_RS10165	0.12	-0.7
2,270,858	+		LRK53_RS10165	0.12	-0.3
2,270,904	+		LRK53_RS10165	0.14	-0.8
2,270,905	-		LRK53_RS10165	0.14	-0.1
2,270,905	-		LRK53_RS10165	0.14	+3.6
2,270,905	-		LRK53_RS10165	0.14	+2.1
2,270,926	+		LRK53_RS10165	0.15	-0.4
2,270,926	+		LRK53_RS10165	0.15	+0.3
2,270,927	-		LRK53_RS10165	0.15	-2.2
2,270,927	-		LRK53_RS10165	0.15	-0.5
2,270,927	-		LRK53_RS10165	0.15	+0.1
2,270,927	-		LRK53_RS10165	0.15	-0.2
2,270,934	-		LRK53_RS10165	0.15	-0.9
2,271,044	-		LRK53_RS10165	0.19	-1.0
2,271,066	+		LRK53_RS10165	0.20	-1.2
2,271,067	-		LRK53_RS10165	0.20	+0.5
2,271,118	+		LRK53_RS10165	0.21	-1.5
2,271,147	+		LRK53_RS10165	0.22	-0.6
2,271,147	+		LRK53_RS10165	0.22	-0.5
2,271,147	+		LRK53_RS10165	0.22	+1.0
2,271,147	+		LRK53_RS10165	0.22	+0.7
2,271,246	+		LRK53_RS10165	0.26	-1.1
2,271,246	+		LRK53_RS10165	0.26	+0.4
2,271,247	-		LRK53_RS10165	0.26	-0.9
2,271,247	-		LRK53_RS10165	0.26	-0.1
2,271,247	-		LRK53_RS10165	0.26	+1.3
2,271,247	-		LRK53_RS10165	0.26	-2.1
2,271,247	-		LRK53_RS10165	0.26	+0.3
2,271,297	+		LRK53_RS10165	0.27	+1.3
2,271,297	+		LRK53_RS10165	0.27	-2.3
2,271,297	+		LRK53_RS10165	0.27	-0.4
2,271,297	+		LRK53_RS10165	0.27	+0.3
2,271,297	+		LRK53_RS10165	0.27	-0.4
2,271,297	+		LRK53_RS10165	0.27	-0.3
2,271,297	+		LRK53_RS10165	0.27	-0.2
2,271,297	+		LRK53_RS10165	0.27	+3.9
2,271,297	+		LRK53_RS10165	0.27	+1.5
2,271,297	+		LRK53_RS10165	0.27	+0.1
2,271,297	+		LRK53_RS10165	0.27	+0.1
2,271,298	-		LRK53_RS10165	0.27	-1.0
2,271,298	-		LRK53_RS10165	0.27	-0.2
2,271,298	-		LRK53_RS10165	0.27	-1.5
2,271,298	-		LRK53_RS10165	0.27	+1.7
2,271,298	-		LRK53_RS10165	0.27	-1.0
2,271,298	-		LRK53_RS10165	0.27	-0.1
2,271,298	-		LRK53_RS10165	0.27	-1.5
2,271,298	-		LRK53_RS10165	0.27	+0.1
2,271,298	-		LRK53_RS10165	0.27	-0.3
2,271,298	-		LRK53_RS10165	0.27	+1.3
2,271,298	-		LRK53_RS10165	0.27	-0.7
2,271,298	-		LRK53_RS10165	0.27	+1.3
2,271,298	-		LRK53_RS10165	0.27	-0.7
2,271,298	-		LRK53_RS10165	0.27	-0.6
2,271,298	-		LRK53_RS10165	0.27	-0.4
2,271,298	-		LRK53_RS10165	0.27	-0.3
2,271,301	+		LRK53_RS10165	0.27	+0.2
2,271,301	+		LRK53_RS10165	0.27	-2.2
2,271,319	-		LRK53_RS10165	0.28	-0.1
2,271,355	-		LRK53_RS10165	0.29	-0.5
2,271,355	-		LRK53_RS10165	0.29	-1.6
2,271,387	+		LRK53_RS10165	0.30	-1.4
2,271,387	+		LRK53_RS10165	0.30	+0.3
2,271,388	-		LRK53_RS10165	0.30	-1.3