Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS09835

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
2,207,280	+		LRK53_RS09830	0.13	-1.4
2,207,280	+		LRK53_RS09830	0.13	-1.6
2,207,281	-		LRK53_RS09830	0.13	-1.6
2,207,281	-		LRK53_RS09830	0.13	+1.2
2,207,281	-		LRK53_RS09830	0.13	+1.2
2,207,281	-		LRK53_RS09830	0.13	-0.8
2,207,281	-		LRK53_RS09830	0.13	-0.4
2,207,302	-		LRK53_RS09830	0.15	+0.2
2,207,302	-		LRK53_RS09830	0.15	+0.7
2,207,407	+		LRK53_RS09830	0.27	-0.8
2,207,407	+		LRK53_RS09830	0.27	-2.8
2,207,407	+		LRK53_RS09830	0.27	-0.8
2,207,407	+		LRK53_RS09830	0.27	+0.2
2,207,407	+		LRK53_RS09830	0.27	-0.8
2,207,407	+		LRK53_RS09830	0.27	-0.4
2,207,408	-		LRK53_RS09830	0.27	-0.4
2,207,574	-		LRK53_RS09830	0.45	-0.8
2,208,164	+				-1.6
2,208,165	-				+0.2
2,208,165	-				-0.6
2,208,165	-				-1.4
2,208,165	-				+0.3
2,208,314	+		LRK53_RS09835	0.13	-0.4
2,208,314	+		LRK53_RS09835	0.13	-0.8
2,208,315	-		LRK53_RS09835	0.13	-0.3
2,208,315	-		LRK53_RS09835	0.13	+0.4
2,208,389	+		LRK53_RS09835	0.17	-1.2
2,208,390	-		LRK53_RS09835	0.17	+0.3
2,208,419	+		LRK53_RS09835	0.19	-0.2
2,208,458	-		LRK53_RS09835	0.21	-1.4
2,208,609	+		LRK53_RS09835	0.29	-0.9
2,208,609	+		LRK53_RS09835	0.29	+0.8
2,208,609	+		LRK53_RS09835	0.29	+0.2
2,208,609	+		LRK53_RS09835	0.29	-0.3
2,208,609	+		LRK53_RS09835	0.29	+1.2
2,208,609	+		LRK53_RS09835	0.29	+2.2
2,208,609	+		LRK53_RS09835	0.29	-0.8
2,208,609	+		LRK53_RS09835	0.29	-0.3
2,208,609	+		LRK53_RS09835	0.29	-1.9
2,208,609	+		LRK53_RS09835	0.29	+1.2
2,208,609	+		LRK53_RS09835	0.29	+0.7
2,208,609	+		LRK53_RS09835	0.29	+0.5
2,208,609	+		LRK53_RS09835	0.29	-1.0
2,208,609	+		LRK53_RS09835	0.29	-1.0
2,208,609	+		LRK53_RS09835	0.29	-0.8
2,208,609	+		LRK53_RS09835	0.29	+1.2
2,208,609	+		LRK53_RS09835	0.29	-0.8
2,208,609	+		LRK53_RS09835	0.29	+0.3
2,208,609	+		LRK53_RS09835	0.29	-0.8
2,208,609	+		LRK53_RS09835	0.29	-1.8
2,208,609	+		LRK53_RS09835	0.29	-0.4
2,208,609	+		LRK53_RS09835	0.29	-0.3
2,208,609	+		LRK53_RS09835	0.29	-1.4
2,208,609	+		LRK53_RS09835	0.29	-0.6
2,208,609	+		LRK53_RS09835	0.29	-0.5
2,208,609	+		LRK53_RS09835	0.29	+0.9
2,208,609	+		LRK53_RS09835	0.29	+1.2
2,208,609	+		LRK53_RS09835	0.29	+0.9
2,208,609	+		LRK53_RS09835	0.29	-1.0
2,208,609	+		LRK53_RS09835	0.29	-0.3
2,208,609	+		LRK53_RS09835	0.29	-1.3
2,208,610	-		LRK53_RS09835	0.29	-0.8
2,208,610	-		LRK53_RS09835	0.29	-0.5
2,208,610	-		LRK53_RS09835	0.29	-1.8
2,208,610	-		LRK53_RS09835	0.29	+0.4
2,208,610	-		LRK53_RS09835	0.29	+0.0
2,208,610	-		LRK53_RS09835	0.29	-1.2
2,208,610	-		LRK53_RS09835	0.29	-1.4
2,208,610	-		LRK53_RS09835	0.29	-1.7
2,208,610	-		LRK53_RS09835	0.29	-1.7
2,208,610	-		LRK53_RS09835	0.29	-0.6
2,208,610	-		LRK53_RS09835	0.29	+0.6
2,208,610	-		LRK53_RS09835	0.29	+1.0
2,208,610	-		LRK53_RS09835	0.29	-1.0
2,208,610	-		LRK53_RS09835	0.29	+2.2
2,208,610	-		LRK53_RS09835	0.29	-1.4
2,208,610	-		LRK53_RS09835	0.29	-0.7
2,208,610	-		LRK53_RS09835	0.29	+1.7
2,208,610	-		LRK53_RS09835	0.29	+1.4
2,208,610	-		LRK53_RS09835	0.29	+0.6
2,208,610	-		LRK53_RS09835	0.29	-2.3
2,208,610	-		LRK53_RS09835	0.29	+0.8
2,208,610	-		LRK53_RS09835	0.29	-1.2
2,208,610	-		LRK53_RS09835	0.29	-0.8
2,208,610	-		LRK53_RS09835	0.29	+0.8
2,208,610	-		LRK53_RS09835	0.29	+0.6
2,208,610	-		LRK53_RS09835	0.29	+2.7
2,208,610	-		LRK53_RS09835	0.29	-0.5
2,208,610	-		LRK53_RS09835	0.29	-0.8
2,208,610	-		LRK53_RS09835	0.29	-0.3
2,208,610	-		LRK53_RS09835	0.29	+1.0
2,208,610	-		LRK53_RS09835	0.29	+1.2
2,208,610	-		LRK53_RS09835	0.29	-0.4
2,208,610	-		LRK53_RS09835	0.29	+3.2
2,208,610	-		LRK53_RS09835	0.29	-2.0
2,208,610	-		LRK53_RS09835	0.29	+0.2
2,208,610	-		LRK53_RS09835	0.29	+0.3
2,208,610	-		LRK53_RS09835	0.29	-1.8
2,208,610	-		LRK53_RS09835	0.29	+1.2
2,208,610	-		LRK53_RS09835	0.29	-0.8
2,208,610	-		LRK53_RS09835	0.29	-1.9
2,208,610	-		LRK53_RS09835	0.29	-0.1
2,208,610	-		LRK53_RS09835	0.29	+1.2
2,208,610	-		LRK53_RS09835	0.29	-0.3
2,208,610	-		LRK53_RS09835	0.29	+1.2
2,208,696	+		LRK53_RS09835	0.34	-0.2
2,208,697	-		LRK53_RS09835	0.34	-0.4
2,208,697	-		LRK53_RS09835	0.34	-2.0
2,208,704	+		LRK53_RS09835	0.35	-0.4
2,208,704	+		LRK53_RS09835	0.35	-0.6
2,208,704	+		LRK53_RS09835	0.35	-0.2
2,208,704	+		LRK53_RS09835	0.35	-1.2
2,208,704	+		LRK53_RS09835	0.35	+0.2
2,208,705	-		LRK53_RS09835	0.35	-0.0
2,208,705	-		LRK53_RS09835	0.35	-0.2
2,208,705	-		LRK53_RS09835	0.35	-0.0
2,208,705	-		LRK53_RS09835	0.35	+0.8
2,208,705	-		LRK53_RS09835	0.35	+0.2
2,208,705	-		LRK53_RS09835	0.35	-1.6
2,208,915	+		LRK53_RS09835	0.46	+0.7
2,208,915	+		LRK53_RS09835	0.46	+0.3
2,208,915	+		LRK53_RS09835	0.46	-0.6
2,208,915	+		LRK53_RS09835	0.46	+0.8
2,208,916	-		LRK53_RS09835	0.46	-0.5
2,208,916	-		LRK53_RS09835	0.46	+0.3
2,209,336	+		LRK53_RS09835	0.70	-0.1
2,209,336	+		LRK53_RS09835	0.70	+1.2
2,209,336	+		LRK53_RS09835	0.70	-1.6
2,209,336	+		LRK53_RS09835	0.70	+0.6
2,209,336	+		LRK53_RS09835	0.70	+0.0
2,209,336	+		LRK53_RS09835	0.70	-0.4
2,209,336	+		LRK53_RS09835	0.70	-0.3
2,209,336	+		LRK53_RS09835	0.70	-1.8
2,209,336	+		LRK53_RS09835	0.70	-1.2
2,209,336	+		LRK53_RS09835	0.70	-0.3
2,209,337	-		LRK53_RS09835	0.70	+0.3
2,209,337	-		LRK53_RS09835	0.70	-0.8
2,209,337	-		LRK53_RS09835	0.70	-1.4
2,209,337	-		LRK53_RS09835	0.70	+0.2
2,209,337	-		LRK53_RS09835	0.70	+0.2
2,209,337	-		LRK53_RS09835	0.70	+0.2
2,209,337	-		LRK53_RS09835	0.70	-0.2
2,209,484	+		LRK53_RS09835	0.78	-0.7
2,209,485	-		LRK53_RS09835	0.78	-0.6
2,209,559	+		LRK53_RS09835	0.82	+0.2
2,209,559	+		LRK53_RS09835	0.82	+1.7
2,209,559	+		LRK53_RS09835	0.82	+0.2
2,209,559	+		LRK53_RS09835	0.82	-1.3
2,209,559	+		LRK53_RS09835	0.82	-0.2
2,209,559	+		LRK53_RS09835	0.82	-0.5
2,209,559	+		LRK53_RS09835	0.82	-2.5
2,209,560	-		LRK53_RS09835	0.82	-2.7
2,209,560	-		LRK53_RS09835	0.82	-0.4
2,209,560	-		LRK53_RS09835	0.82	+2.7
2,209,560	-		LRK53_RS09835	0.82	-0.3
2,209,560	-		LRK53_RS09835	0.82	-2.0
2,209,560	-		LRK53_RS09835	0.82	+0.2
2,209,560	-		LRK53_RS09835	0.82	+0.1
2,209,560	-		LRK53_RS09835	0.82	-0.0
2,209,560	-		LRK53_RS09835	0.82	+2.4
2,209,560	-		LRK53_RS09835	0.82	-0.9
2,209,560	-		LRK53_RS09835	0.82	+0.2
2,209,561	+		LRK53_RS09835	0.82	-0.6
2,209,561	+		LRK53_RS09835	0.82	-0.9
2,209,561	+		LRK53_RS09835	0.82	+0.6
2,209,561	+		LRK53_RS09835	0.82	+0.4
2,209,561	+		LRK53_RS09835	0.82	-0.3
2,209,561	+		LRK53_RS09835	0.82	-3.2
2,209,562	-		LRK53_RS09835	0.82	-1.7
2,209,562	-		LRK53_RS09835	0.82	-1.8
2,209,562	-		LRK53_RS09835	0.82	-0.6
2,209,562	-		LRK53_RS09835	0.82	-0.0
2,209,564	-		LRK53_RS09835	0.82	+0.7
2,209,772	+				-0.2
2,209,772	+				-0.3
2,209,772	+				-0.2
2,209,772	+				-1.4
2,209,773	-				-0.5
2,209,773	-				-0.4
2,209,773	-				-1.2
2,209,773	-				-0.8
2,209,773	-				-0.3
2,209,773	-				+1.7
2,209,811	+				-0.8
2,209,811	+				+0.0
2,209,811	+				-1.2
2,209,811	+				+0.5
2,209,812	-				-0.5
2,209,812	-				-0.0
2,209,812	-				+0.1
2,209,812	-				+0.4
2,209,812	-				-1.1
2,209,812	-				-1.2
2,209,812	-				-1.2
2,210,027	+		LRK53_RS09840	0.20	-0.8
2,210,027	+		LRK53_RS09840	0.20	+0.6
2,210,027	+		LRK53_RS09840	0.20	+2.2
2,210,027	+		LRK53_RS09840	0.20	+1.2
2,210,027	+		LRK53_RS09840	0.20	+0.2
2,210,027	+		LRK53_RS09840	0.20	-1.1
2,210,027	+		LRK53_RS09840	0.20	-0.1
2,210,028	-		LRK53_RS09840	0.21	-0.8
2,210,028	-		LRK53_RS09840	0.21	-1.2
2,210,028	-		LRK53_RS09840	0.21	+0.0
2,210,028	-		LRK53_RS09840	0.21	-0.4
2,210,093	+		LRK53_RS09840	0.39	+0.2
2,210,093	+		LRK53_RS09840	0.39	+3.5
2,210,093	+		LRK53_RS09840	0.39	+2.3
2,210,093	+		LRK53_RS09840	0.39	-0.2
2,210,093	+		LRK53_RS09840	0.39	+0.6
2,210,093	+		LRK53_RS09840	0.39	-1.4
2,210,093	+		LRK53_RS09840	0.39	-0.4
2,210,093	+		LRK53_RS09840	0.39	-0.5
2,210,093	+		LRK53_RS09840	0.39	+0.6
2,210,093	+		LRK53_RS09840	0.39	-0.4
2,210,093	+		LRK53_RS09840	0.39	-2.5
2,210,093	+		LRK53_RS09840	0.39	+0.8
2,210,093	+		LRK53_RS09840	0.39	-2.2
2,210,093	+		LRK53_RS09840	0.39	+0.3
2,210,093	+		LRK53_RS09840	0.39	-2.0
2,210,093	+		LRK53_RS09840	0.39	+0.1
2,210,093	+		LRK53_RS09840	0.39	-0.1
2,210,093	+		LRK53_RS09840	0.39	+0.2
2,210,093	+		LRK53_RS09840	0.39	-3.2
2,210,093	+		LRK53_RS09840	0.39	+0.3
2,210,093	+		LRK53_RS09840	0.39	-1.6
2,210,093	+		LRK53_RS09840	0.39	-1.4
2,210,093	+		LRK53_RS09840	0.39	-0.2
2,210,093	+		LRK53_RS09840	0.39	+1.3
2,210,093	+		LRK53_RS09840	0.39	+0.2
2,210,093	+		LRK53_RS09840	0.39	-0.5
2,210,093	+		LRK53_RS09840	0.39	-0.6
2,210,093	+		LRK53_RS09840	0.39	-0.4
2,210,093	+		LRK53_RS09840	0.39	-2.0
2,210,093	+		LRK53_RS09840	0.39	-0.8
2,210,093	+		LRK53_RS09840	0.39	-0.4
2,210,093	+		LRK53_RS09840	0.39	+1.2
2,210,093	+		LRK53_RS09840	0.39	+0.2
2,210,094	-		LRK53_RS09840	0.39	-1.6
2,210,094	-		LRK53_RS09840	0.39	+1.2
2,210,094	-		LRK53_RS09840	0.39	-0.8
2,210,094	-		LRK53_RS09840	0.39	+0.2
2,210,094	-		LRK53_RS09840	0.39	-0.4
2,210,094	-		LRK53_RS09840	0.39	+0.0
2,210,094	-		LRK53_RS09840	0.39	-0.5
2,210,094	-		LRK53_RS09840	0.39	-1.3
2,210,094	-		LRK53_RS09840	0.39	+3.7
2,210,094	-		LRK53_RS09840	0.39	-0.3
2,210,094	-		LRK53_RS09840	0.39	+0.2
2,210,094	-		LRK53_RS09840	0.39	-0.3
2,210,094	-		LRK53_RS09840	0.39	-0.3
2,210,094	-		LRK53_RS09840	0.39	-1.4
2,210,094	-		LRK53_RS09840	0.39	+0.2
2,210,094	-		LRK53_RS09840	0.39	+0.7
2,210,094	-		LRK53_RS09840	0.39	+1.2
2,210,094	-		LRK53_RS09840	0.39	-0.2
2,210,094	-		LRK53_RS09840	0.39	-1.7
2,210,094	-		LRK53_RS09840	0.39	-0.3
2,210,094	-		LRK53_RS09840	0.39	-1.2
2,210,094	-		LRK53_RS09840	0.39	+0.8
2,210,094	-		LRK53_RS09840	0.39	-1.7
2,210,094	-		LRK53_RS09840	0.39	-0.9
2,210,094	-		LRK53_RS09840	0.39	-0.5
2,210,094	-		LRK53_RS09840	0.39	-1.8
2,210,094	-		LRK53_RS09840	0.39	-0.4
2,210,094	-		LRK53_RS09840	0.39	-0.3
2,210,094	-		LRK53_RS09840	0.39	-0.2
2,210,094	-		LRK53_RS09840	0.39	-0.6
2,210,136	+		LRK53_RS09840	0.50	-1.4
2,210,137	-		LRK53_RS09840	0.51	+0.7
2,210,150	-		LRK53_RS09840	0.54	+0.1
2,210,150	-		LRK53_RS09840	0.54	-0.3
2,210,150	-		LRK53_RS09840	0.54	+0.9
2,210,441	+				-0.7
2,210,441	+				+0.0
2,210,441	+				-2.0
2,210,441	+				+0.1
2,210,441	+				-0.5
2,210,441	+				+0.2
2,210,441	+				-0.6
2,210,441	+				+1.3
2,210,533	+				+0.2
2,210,578	+				-0.4
2,210,578	+				-0.3
2,210,578	+				+0.1
2,210,579	-				-0.2
2,210,579	-				+0.4
2,210,579	-				+0.2
2,210,594	-				-0.7
2,210,594	-				-0.2
2,210,594	-				+1.2
2,210,594	-				-0.8
2,210,621	+				-0.2
2,210,622	-				+1.2
2,210,622	-				-0.3
2,210,641	+				-0.6
2,210,641	+				-1.8
2,210,642	-				+0.5
2,210,642	-				-0.3
2,210,642	-				-0.0
2,210,816	+				+0.2
2,210,816	+				-0.8
2,210,817	-				+1.2
2,210,817	-				+3.2
2,210,817	-				+0.5
2,210,817	-				-1.6
2,210,817	-				-0.5
2,210,817	-				-1.4
2,210,817	-				-1.8
2,210,833	+				-0.2
2,210,833	+				-0.1
2,210,833	+				+1.2
2,210,833	+				+2.5
2,210,833	+				-0.2
2,210,833	+				+1.2
2,210,833	+				+1.2
2,210,833	+				-1.2
2,210,833	+				-1.4
2,210,833	+				-2.8
2,210,833	+				-1.8
2,210,834	-				+0.2
2,210,834	-				-1.2
2,210,834	-				-1.5
2,210,834	-				-1.7
2,210,834	-				-0.4
2,210,834	-				-0.8
2,210,834	-				-0.8