Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS09600

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
2,156,888	+		LRK53_RS09590	0.69	+0.2
2,156,888	+		LRK53_RS09590	0.69	+1.2
2,156,888	+		LRK53_RS09590	0.69	-0.4
2,156,889	-		LRK53_RS09590	0.69	+0.2
2,156,889	-		LRK53_RS09590	0.69	-0.2
2,156,889	-		LRK53_RS09590	0.69	-0.4
2,156,889	-		LRK53_RS09590	0.69	+0.7
2,157,123	+				-0.3
2,157,124	-				-0.8
2,157,144	+				-0.8
2,157,207	+				-0.4
2,157,380	+		LRK53_RS09595	0.27	-0.7
2,157,380	+		LRK53_RS09595	0.27	+0.2
2,157,380	+		LRK53_RS09595	0.27	-1.2
2,157,380	+		LRK53_RS09595	0.27	+2.2
2,157,381	-		LRK53_RS09595	0.28	+0.7
2,157,575	+				-0.0
2,157,575	+				-2.0
2,157,684	+				-0.5
2,157,684	+				-0.9
2,157,684	+				+0.4
2,157,684	+				-1.8
2,157,684	+				-0.8
2,157,684	+				-0.1
2,157,684	+				-1.2
2,157,684	+				+0.4
2,157,684	+				-0.8
2,157,684	+				-1.8
2,157,684	+				-0.2
2,157,684	+				-0.8
2,157,684	+				+1.2
2,157,684	+				-1.4
2,157,684	+				+1.8
2,157,684	+				-2.5
2,157,684	+				-1.4
2,157,684	+				-0.4
2,157,684	+				+0.3
2,157,684	+				+1.2
2,157,684	+				-0.5
2,157,684	+				+0.4
2,157,684	+				+1.5
2,157,684	+				-1.2
2,157,684	+				-1.0
2,157,684	+				+0.3
2,157,684	+				-1.3
2,157,684	+				-1.3
2,157,685	-				+0.8
2,157,685	-				-0.4
2,157,685	-				+1.5
2,157,685	-				-0.1
2,157,685	-				-1.1
2,157,685	-				+0.2
2,157,685	-				+1.3
2,157,685	-				-0.3
2,157,685	-				-0.7
2,157,685	-				+0.2
2,157,685	-				+0.3
2,157,685	-				+0.2
2,157,685	-				+0.6
2,157,685	-				-0.2
2,157,685	-				+1.2
2,157,685	-				-0.5
2,157,685	-				-0.7
2,157,685	-				+0.2
2,157,685	-				-1.0
2,157,685	-				-1.3
2,157,685	-				-0.6
2,157,685	-				+0.2
2,157,685	-				-1.8
2,157,686	+				+2.2
2,157,686	+				-0.4
2,157,686	+				+1.2
2,157,686	+				+0.2
2,157,686	+				+1.6
2,157,686	+				+0.3
2,157,686	+				+2.7
2,157,686	+				+0.0
2,157,686	+				-0.7
2,157,686	+				+0.3
2,157,686	+				+0.3
2,157,686	+				-0.3
2,157,686	+				+0.3
2,157,686	+				+0.2
2,157,686	+				+0.8
2,157,686	+				+0.9
2,157,686	+				-1.2
2,157,686	+				+0.2
2,157,686	+				-0.0
2,157,686	+				+0.2
2,157,686	+				+0.0
2,157,686	+				-0.7
2,157,686	+				-0.5
2,157,686	+				+0.2
2,157,686	+				-0.2
2,157,686	+				-0.8
2,157,686	+				+0.1
2,157,686	+				-1.8
2,157,686	+				+0.5
2,157,686	+				+0.1
2,157,686	+				+0.6
2,157,686	+				-0.4
2,157,686	+				-0.4
2,157,686	+				-1.4
2,157,686	+				+0.2
2,157,686	+				-0.4
2,157,686	+				+2.5
2,157,686	+				-0.0
2,157,686	+				-0.5
2,157,686	+				+0.2
2,157,686	+				-0.5
2,157,686	+				-1.1
2,157,686	+				-1.4
2,157,686	+				+0.6
2,157,686	+				+1.2
2,157,686	+				-0.1
2,157,686	+				-0.0
2,157,686	+				-0.3
2,157,686	+				+3.5
2,157,686	+				-0.4
2,157,686	+				-0.8
2,157,686	+				+0.2
2,157,686	+				-1.2
2,157,686	+				-0.7
2,157,686	+				-1.4
2,157,686	+				+0.2
2,157,686	+				-1.2
2,157,686	+				+0.2
2,157,686	+				-1.2
2,157,686	+				+1.9
2,157,686	+				+0.1
2,157,686	+				-1.3
2,157,686	+				-0.4
2,157,686	+				-1.7
2,157,686	+				-1.7
2,157,686	+				+2.2
2,157,686	+				-0.3
2,157,686	+				+0.2
2,157,686	+				-1.4
2,157,686	+				-0.8
2,157,686	+				+1.4
2,157,686	+				-1.0
2,157,686	+				-1.4
2,157,686	+				-0.1
2,157,686	+				+0.4
2,157,686	+				-1.2
2,157,686	+				+0.6
2,157,686	+				-0.7
2,157,686	+				+1.3
2,157,686	+				-1.4
2,157,686	+				-2.0
2,157,686	+				-1.4
2,157,686	+				+0.5
2,157,686	+				+0.2
2,157,686	+				-2.7
2,157,686	+				-0.5
2,157,686	+				-0.5
2,157,687	-				-0.2
2,157,687	-				-1.0
2,157,687	-				-0.5
2,157,687	-				+0.6
2,157,687	-				-1.7
2,157,687	-				-2.2
2,157,687	-				-0.7
2,157,687	-				+1.7
2,157,687	-				-0.3
2,157,687	-				+0.6
2,157,687	-				-1.2
2,157,687	-				-1.8
2,157,687	-				+0.3
2,157,687	-				-1.4
2,157,687	-				-1.3
2,157,687	-				-2.4
2,157,687	-				-1.7
2,157,687	-				+0.2
2,157,687	-				+0.6
2,157,687	-				-1.8
2,157,687	-				+1.1
2,157,687	-				-0.9
2,157,687	-				+1.7
2,157,687	-				+0.3
2,157,687	-				-3.0
2,157,687	-				-0.1
2,157,687	-				-1.7
2,157,687	-				-1.7
2,157,687	-				+0.4
2,157,687	-				-0.7
2,157,687	-				-1.4
2,157,687	-				-0.7
2,157,687	-				-0.3
2,157,687	-				+1.2
2,157,687	-				-0.2
2,157,687	-				-1.2
2,157,687	-				-1.4
2,157,687	-				+0.6
2,157,687	-				-0.4
2,157,687	-				+0.3
2,157,687	-				-0.8
2,157,687	-				-0.1
2,157,687	-				+0.2
2,157,687	-				+0.1
2,157,687	-				-0.4
2,157,687	-				-1.2
2,157,687	-				+1.4
2,157,687	-				+0.7
2,157,687	-				+1.7
2,157,687	-				+0.2
2,157,687	-				+0.4
2,157,687	-				-0.3
2,157,687	-				+1.2
2,157,687	-				+0.3
2,157,687	-				+0.4
2,157,687	-				+0.2
2,157,687	-				+2.7
2,157,687	-				-0.4
2,157,687	-				-0.7
2,157,687	-				-0.3
2,157,687	-				-1.2
2,157,687	-				+0.2
2,157,687	-				+0.7
2,157,687	-				-0.7
2,157,687	-				-1.2
2,157,687	-				+1.3
2,157,687	-				+0.2
2,157,687	-				+0.6
2,157,687	-				+0.2
2,157,687	-				-0.7
2,157,687	-				-0.4
2,157,687	-				-0.7
2,157,687	-				-0.1
2,157,687	-				+0.2
2,157,687	-				-0.4
2,157,687	-				-0.7
2,157,687	-				+0.2
2,157,687	-				+0.7
2,157,687	-				+0.3
2,157,688	+				+0.3
2,157,688	+				+0.0
2,157,688	+				-2.8
2,157,688	+				+0.3
2,157,688	+				+0.4
2,157,688	+				+0.5
2,157,688	+				-0.7
2,157,688	+				-0.3
2,157,688	+				-0.7
2,157,688	+				-1.0
2,157,688	+				+1.2
2,157,688	+				+1.3
2,157,688	+				-0.1
2,157,688	+				+0.2
2,157,688	+				-0.3
2,157,688	+				+0.3
2,157,688	+				+1.2
2,157,688	+				-0.7
2,157,688	+				+1.2
2,157,688	+				-1.7
2,157,688	+				-0.8
2,157,688	+				-0.2
2,157,688	+				-0.4
2,157,688	+				-0.4
2,157,688	+				-1.6
2,157,688	+				+1.2
2,157,688	+				-1.7
2,157,688	+				+2.0
2,157,688	+				-0.0
2,157,688	+				+0.3
2,157,688	+				-0.3
2,157,688	+				+0.7
2,157,688	+				-0.2
2,157,688	+				+0.2
2,157,688	+				-0.8
2,157,688	+				+0.7
2,157,688	+				-0.4
2,157,688	+				+0.7
2,157,688	+				+0.2
2,157,688	+				-0.7
2,157,688	+				-1.0
2,157,688	+				+1.2
2,157,688	+				-0.9
2,157,688	+				-0.2
2,157,688	+				+1.2
2,157,688	+				-0.8
2,157,688	+				-0.8
2,157,688	+				-1.8
2,157,688	+				+0.3
2,157,688	+				-0.8
2,157,688	+				-0.3
2,157,688	+				+0.1
2,157,688	+				-0.3
2,157,688	+				-0.1
2,157,688	+				+0.2
2,157,688	+				-1.7
2,157,688	+				-0.8
2,157,688	+				-2.2
2,157,688	+				+0.2
2,157,688	+				-1.2
2,157,688	+				-1.7
2,157,688	+				-0.2
2,157,688	+				-0.7
2,157,688	+				+1.2
2,157,688	+				-1.2
2,157,688	+				-0.6
2,157,688	+				-0.7
2,157,688	+				-2.2
2,157,688	+				-0.8
2,157,688	+				-0.2
2,157,688	+				+0.2
2,157,688	+				+1.2
2,157,688	+				+0.3
2,157,688	+				+0.5
2,157,689	-				+0.3
2,157,689	-				+0.0
2,157,689	-				+0.9
2,157,689	-				-0.4
2,157,689	-				-0.0
2,157,689	-				+0.6
2,157,689	-				-0.3
2,157,689	-				-0.8
2,157,689	-				-0.5
2,157,689	-				+0.2
2,157,689	-				-1.8
2,157,689	-				-1.4
2,157,689	-				-0.5
2,157,689	-				+0.7
2,157,689	-				-1.4
2,157,689	-				-0.3
2,157,689	-				-2.2
2,157,689	-				-1.6
2,157,689	-				+1.3
2,157,689	-				-2.5
2,157,689	-				-0.6
2,157,689	-				-1.2
2,157,689	-				-0.1
2,157,689	-				+1.4
2,157,689	-				-1.0
2,157,689	-				-0.2
2,157,689	-				-0.4
2,157,689	-				-1.7
2,157,689	-				-0.8
2,157,689	-				+0.2
2,157,689	-				-0.4
2,157,689	-				+0.4
2,157,689	-				-0.3
2,157,689	-				-1.7
2,157,689	-				-0.8
2,157,689	-				+1.3
2,157,689	-				-0.4
2,157,689	-				-0.3
2,157,689	-				-0.2
2,157,689	-				-0.7
2,157,689	-				+0.7
2,157,689	-				+1.2
2,157,689	-				-1.8
2,157,689	-				-0.8
2,157,689	-				-0.0
2,157,689	-				+0.6
2,157,689	-				+0.5
2,157,689	-				+0.9
2,157,689	-				-0.5
2,157,689	-				-1.0
2,157,689	-				+0.9
2,157,689	-				-0.9
2,157,689	-				-0.4
2,157,689	-				-1.2
2,157,689	-				-0.8
2,157,689	-				+0.9
2,157,689	-				+0.7
2,157,689	-				-0.4
2,157,689	-				-1.5
2,157,689	-				-0.4
2,157,689	-				+0.8
2,157,689	-				-0.7
2,157,689	-				-0.6
2,157,846	+		LRK53_RS09600	0.12	-1.4
2,157,846	+		LRK53_RS09600	0.12	-1.1
2,157,846	+		LRK53_RS09600	0.12	-0.4
2,157,846	+		LRK53_RS09600	0.12	+0.2
2,157,846	+		LRK53_RS09600	0.12	-1.7
2,157,846	+		LRK53_RS09600	0.12	-1.8
2,157,846	+		LRK53_RS09600	0.12	-2.8
2,157,847	-		LRK53_RS09600	0.12	-0.2
2,157,847	-		LRK53_RS09600	0.12	-0.2
2,157,847	-		LRK53_RS09600	0.12	+0.7
2,157,847	-		LRK53_RS09600	0.12	-1.0
2,157,847	-		LRK53_RS09600	0.12	-2.5
2,158,002	+		LRK53_RS09600	0.28	+1.2
2,158,029	+		LRK53_RS09600	0.31	-0.3
2,158,029	+		LRK53_RS09600	0.31	+0.6
2,158,029	+		LRK53_RS09600	0.31	+0.3
2,158,029	+		LRK53_RS09600	0.31	-0.1
2,158,029	+		LRK53_RS09600	0.31	-1.2
2,158,029	+		LRK53_RS09600	0.31	-0.9
2,158,029	+		LRK53_RS09600	0.31	+1.7
2,158,029	+		LRK53_RS09600	0.31	+0.7
2,158,029	+		LRK53_RS09600	0.31	-1.4
2,158,029	+		LRK53_RS09600	0.31	-2.7
2,158,029	+		LRK53_RS09600	0.31	+2.2
2,158,029	+		LRK53_RS09600	0.31	-1.3
2,158,029	+		LRK53_RS09600	0.31	+1.6
2,158,029	+		LRK53_RS09600	0.31	-1.4
2,158,029	+		LRK53_RS09600	0.31	-0.4
2,158,029	+		LRK53_RS09600	0.31	-0.4
2,158,029	+		LRK53_RS09600	0.31	-1.7
2,158,030	-		LRK53_RS09600	0.31	-0.8
2,158,030	-		LRK53_RS09600	0.31	-0.1
2,158,030	-		LRK53_RS09600	0.31	+1.2
2,158,030	-		LRK53_RS09600	0.31	-1.4
2,158,030	-		LRK53_RS09600	0.31	-0.4
2,158,030	-		LRK53_RS09600	0.31	+0.2
2,158,030	-		LRK53_RS09600	0.31	-0.1
2,158,030	-		LRK53_RS09600	0.31	+0.5
2,158,030	-		LRK53_RS09600	0.31	-0.8
2,158,030	-		LRK53_RS09600	0.31	-0.7
2,158,030	-		LRK53_RS09600	0.31	+1.8
2,158,030	-		LRK53_RS09600	0.31	-0.6
2,158,030	-		LRK53_RS09600	0.31	-0.1
2,158,030	-		LRK53_RS09600	0.31	+0.3
2,158,030	-		LRK53_RS09600	0.31	+1.4
2,158,030	-		LRK53_RS09600	0.31	+2.7
2,158,296	+		LRK53_RS09600	0.60	+1.2
2,158,297	-		LRK53_RS09600	0.60	-0.3
2,158,297	-		LRK53_RS09600	0.60	-0.4
2,158,308	+		LRK53_RS09600	0.61	+1.9
2,158,308	+		LRK53_RS09600	0.61	-1.9
2,158,308	+		LRK53_RS09600	0.61	+1.2
2,158,308	+		LRK53_RS09600	0.61	-1.1
2,158,308	+		LRK53_RS09600	0.61	-0.5
2,158,308	+		LRK53_RS09600	0.61	+0.5
2,158,308	+		LRK53_RS09600	0.61	-0.3
2,158,308	+		LRK53_RS09600	0.61	-0.6
2,158,308	+		LRK53_RS09600	0.61	-0.6
2,158,308	+		LRK53_RS09600	0.61	+1.5
2,158,308	+		LRK53_RS09600	0.61	+1.2
2,158,308	+		LRK53_RS09600	0.61	-2.3
2,158,308	+		LRK53_RS09600	0.61	-0.4
2,158,309	-		LRK53_RS09600	0.61	-2.0
2,158,309	-		LRK53_RS09600	0.61	+2.7
2,158,309	-		LRK53_RS09600	0.61	+2.2
2,158,309	-		LRK53_RS09600	0.61	+0.0
2,158,309	-		LRK53_RS09600	0.61	+0.4
2,158,309	-		LRK53_RS09600	0.61	+0.2
2,158,309	-		LRK53_RS09600	0.61	+0.3
2,158,309	-		LRK53_RS09600	0.61	-1.5
2,158,320	+		LRK53_RS09600	0.62	+2.2
2,158,320	+		LRK53_RS09600	0.62	+0.4
2,158,321	-		LRK53_RS09600	0.62	-1.4
2,158,321	-		LRK53_RS09600	0.62	+0.6
2,158,435	+		LRK53_RS09600	0.75	-0.2
2,158,435	+		LRK53_RS09600	0.75	-1.3
2,158,435	+		LRK53_RS09600	0.75	-1.2
2,158,435	+		LRK53_RS09600	0.75	+0.6
2,158,436	-		LRK53_RS09600	0.75	-1.7
2,158,436	-		LRK53_RS09600	0.75	+0.6
2,158,581	+				-1.4
2,158,582	-				+0.5
2,158,629	+				-0.4
2,158,629	+				+0.6
2,158,629	+				+0.7
2,158,630	-				-1.2
2,158,630	-				-0.3
2,158,672	-				-0.4
2,158,787	+		LRK53_RS09605	0.20	+0.7
2,158,787	+		LRK53_RS09605	0.20	+0.6
2,158,787	+		LRK53_RS09605	0.20	-0.7
2,158,787	+		LRK53_RS09605	0.20	-0.6
2,158,788	-		LRK53_RS09605	0.20	-1.2
2,158,788	-		LRK53_RS09605	0.20	-0.3
2,158,855	-		LRK53_RS09605	0.37	-0.0
2,158,855	-		LRK53_RS09605	0.37	-1.7
2,159,069	+				+0.7
2,159,069	+				-0.8
2,159,069	+				+1.7
2,159,069	+				-0.1
2,159,069	+				-0.7
2,159,070	-				+1.2
2,159,070	-				+1.3
2,159,070	-				-0.3
2,159,070	-				-0.2
2,159,070	-				-1.8
2,159,170	+				-0.8
2,159,170	+				+0.6
2,159,171	-				-0.8
2,159,171	-				-1.5
2,159,171	-				-0.8
2,159,171	-				+0.1
2,159,171	-				-1.0
2,159,217	+				-0.3
2,159,217	+				-1.8
2,159,217	+				+0.3
2,159,217	+				-0.0
2,159,217	+				-1.5
2,159,217	+				-2.4
2,159,217	+				-2.5
2,159,217	+				+1.2
2,159,217	+				+1.2
2,159,217	+				-0.3
2,159,217	+				+0.4
2,159,217	+				-0.4
2,159,217	+				-1.4
2,159,217	+				+0.2
2,159,217	+				-0.6
2,159,217	+				-0.4
2,159,217	+				-0.8
2,159,217	+				-0.5
2,159,217	+				-1.0
2,159,217	+				-0.2
2,159,217	+				+0.7
2,159,217	+				-0.8
2,159,217	+				-1.1
2,159,217	+				-1.0
2,159,217	+				+0.3
2,159,217	+				-0.3
2,159,218	-				-1.6
2,159,218	-				-0.7
2,159,218	-				-0.6
2,159,218	-				-0.2
2,159,218	-				-0.4
2,159,218	-				-0.4
2,159,218	-				-0.1
2,159,218	-				+0.5
2,159,218	-				-0.7
2,159,218	-				-0.0
2,159,218	-				+1.2
2,159,218	-				-1.4
2,159,218	-				-0.7
2,159,218	-				-0.4
2,159,218	-				-0.7
2,159,218	-				-0.7
2,159,218	-				-0.3
2,159,218	-				+0.2
2,159,218	-				-1.2
2,159,218	-				-0.7
2,159,218	-				+0.9
2,159,218	-				-0.8
2,159,218	-				+3.5
2,159,218	-				-1.7
2,159,218	-				-0.2
2,159,218	-				+0.2
2,159,218	-				+0.4
2,159,262	+				-0.2
2,159,263	-				+1.2
2,159,295	+				-0.8
2,159,295	+				-1.3
2,159,295	+				-0.0
2,159,295	+				-0.3
2,159,295	+				-1.0
2,159,295	+				-0.6
2,159,295	+				-0.4
2,159,296	-				+0.7
2,159,296	-				-1.2
2,159,296	-				-0.6
2,159,296	-				+0.2
2,159,346	+				-0.8
2,159,347	-				-0.8