Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS09185

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
2,055,327	+		LRK53_RS09180	0.63	-0.4
2,055,327	+		LRK53_RS09180	0.63	-1.2
2,055,327	+		LRK53_RS09180	0.63	-1.3
2,055,327	+		LRK53_RS09180	0.63	-0.1
2,055,328	-		LRK53_RS09180	0.63	-0.2
2,055,328	-		LRK53_RS09180	0.63	+0.6
2,055,394	-		LRK53_RS09180	0.67	+0.2
2,055,436	+		LRK53_RS09180	0.69	-2.5
2,055,436	+		LRK53_RS09180	0.69	-2.3
2,055,436	+		LRK53_RS09180	0.69	-0.8
2,055,473	-		LRK53_RS09180	0.71	-1.2
2,055,473	-		LRK53_RS09180	0.71	-0.8
2,055,654	+		LRK53_RS09180	0.81	-0.4
2,055,654	+		LRK53_RS09180	0.81	-1.2
2,055,782	+		LRK53_RS09180	0.88	-0.9
2,055,782	+		LRK53_RS09180	0.88	+1.6
2,055,789	+		LRK53_RS09180	0.88	-0.4
2,055,789	+		LRK53_RS09180	0.88	-1.8
2,055,789	+		LRK53_RS09180	0.88	-0.7
2,055,789	+		LRK53_RS09180	0.88	-0.7
2,055,789	+		LRK53_RS09180	0.88	+0.6
2,055,789	+		LRK53_RS09180	0.88	-0.4
2,055,789	+		LRK53_RS09180	0.88	-0.8
2,055,789	+		LRK53_RS09180	0.88	-1.7
2,055,789	+		LRK53_RS09180	0.88	+2.7
2,055,789	+		LRK53_RS09180	0.88	-1.3
2,055,789	+		LRK53_RS09180	0.88	-1.1
2,055,789	+		LRK53_RS09180	0.88	-0.8
2,055,789	+		LRK53_RS09180	0.88	+0.6
2,055,789	+		LRK53_RS09180	0.88	+0.1
2,055,789	+		LRK53_RS09180	0.88	-1.4
2,055,789	+		LRK53_RS09180	0.88	+0.1
2,055,789	+		LRK53_RS09180	0.88	+0.3
2,055,789	+		LRK53_RS09180	0.88	+0.6
2,055,790	-		LRK53_RS09180	0.88	+0.6
2,055,790	-		LRK53_RS09180	0.88	-0.8
2,055,790	-		LRK53_RS09180	0.88	-1.0
2,055,790	-		LRK53_RS09180	0.88	-0.4
2,055,790	-		LRK53_RS09180	0.88	-1.0
2,055,790	-		LRK53_RS09180	0.88	+1.2
2,055,790	-		LRK53_RS09180	0.88	-1.2
2,055,790	-		LRK53_RS09180	0.88	+0.6
2,055,858	+				+1.6
2,055,858	+				-0.6
2,055,858	+				-0.3
2,055,858	+				-1.4
2,055,858	+				-0.6
2,055,858	+				-1.5
2,055,858	+				-0.4
2,055,858	+				-0.5
2,055,858	+				-1.2
2,055,858	+				-0.7
2,055,858	+				-0.3
2,055,858	+				-1.3
2,055,858	+				+0.2
2,055,858	+				-1.2
2,055,859	-				+2.2
2,055,859	-				-0.3
2,055,859	-				-0.4
2,055,859	-				+0.7
2,055,859	-				-1.1
2,055,859	-				-2.8
2,055,859	-				+1.4
2,055,859	-				+3.3
2,055,991	-				+0.0
2,056,005	+				-0.6
2,056,008	+				-1.4
2,056,008	+				-1.8
2,056,008	+				-1.2
2,056,008	+				+0.6
2,056,009	-				-0.7
2,056,009	-				+0.2
2,056,009	-				-1.2
2,056,011	+				-0.3
2,056,011	+				-1.7
2,056,011	+				-0.8
2,056,011	+				-0.1
2,056,011	+				-0.4
2,056,011	+				+0.2
2,056,011	+				+0.4
2,056,011	+				-2.0
2,056,011	+				-0.3
2,056,011	+				-2.2
2,056,011	+				-1.1
2,056,011	+				+0.2
2,056,011	+				+1.2
2,056,011	+				-0.2
2,056,011	+				-0.5
2,056,011	+				-1.4
2,056,012	-				+0.6
2,056,012	-				+1.2
2,056,012	-				+0.6
2,056,012	-				-0.8
2,056,060	+				-1.0
2,056,153	+				+2.7
2,056,153	+				+0.2
2,056,154	-				-0.7
2,056,213	+		LRK53_RS09185	0.12	-0.2
2,056,214	-		LRK53_RS09185	0.12	-0.1
2,056,463	+		LRK53_RS09185	0.27	-2.0
2,056,489	+		LRK53_RS09185	0.28	+0.9
2,056,489	+		LRK53_RS09185	0.28	-0.2
2,056,489	+		LRK53_RS09185	0.28	+0.6
2,056,489	+		LRK53_RS09185	0.28	+1.2
2,056,489	+		LRK53_RS09185	0.28	+0.2
2,056,489	+		LRK53_RS09185	0.28	-1.5
2,056,489	+		LRK53_RS09185	0.28	+0.0
2,056,489	+		LRK53_RS09185	0.28	-1.8
2,056,489	+		LRK53_RS09185	0.28	+0.8
2,056,489	+		LRK53_RS09185	0.28	-0.5
2,056,489	+		LRK53_RS09185	0.28	+0.7
2,056,489	+		LRK53_RS09185	0.28	+0.6
2,056,489	+		LRK53_RS09185	0.28	-0.2
2,056,489	+		LRK53_RS09185	0.28	-1.0
2,056,490	-		LRK53_RS09185	0.28	+0.8
2,056,490	-		LRK53_RS09185	0.28	-2.0
2,056,490	-		LRK53_RS09185	0.28	-0.2
2,056,490	-		LRK53_RS09185	0.28	-0.4
2,056,540	+		LRK53_RS09185	0.31	-1.4
2,056,541	-		LRK53_RS09185	0.31	-1.4
2,056,607	-		LRK53_RS09185	0.35	-0.0
2,056,618	+		LRK53_RS09185	0.36	-1.6
2,056,618	+		LRK53_RS09185	0.36	+1.2
2,056,618	+		LRK53_RS09185	0.36	-1.8
2,056,618	+		LRK53_RS09185	0.36	-2.0
2,056,618	+		LRK53_RS09185	0.36	+0.3
2,056,618	+		LRK53_RS09185	0.36	-0.6
2,056,618	+		LRK53_RS09185	0.36	+0.2
2,056,618	+		LRK53_RS09185	0.36	+1.0
2,056,619	-		LRK53_RS09185	0.36	-0.0
2,056,619	-		LRK53_RS09185	0.36	-0.6
2,056,619	-		LRK53_RS09185	0.36	-0.2
2,056,619	-		LRK53_RS09185	0.36	+2.7
2,056,619	-		LRK53_RS09185	0.36	-1.2
2,056,619	-		LRK53_RS09185	0.36	-1.8
2,056,619	-		LRK53_RS09185	0.36	-2.3
2,056,619	-		LRK53_RS09185	0.36	+0.7
2,056,619	-		LRK53_RS09185	0.36	-0.6
2,056,619	-		LRK53_RS09185	0.36	-0.8
2,056,787	-		LRK53_RS09185	0.46	+1.7
2,056,912	+		LRK53_RS09185	0.53	-0.4
2,056,912	+		LRK53_RS09185	0.53	+1.3
2,056,912	+		LRK53_RS09185	0.53	+0.2
2,056,912	+		LRK53_RS09185	0.53	+1.2
2,056,912	+		LRK53_RS09185	0.53	+1.2
2,056,913	-		LRK53_RS09185	0.53	-0.7
2,056,913	-		LRK53_RS09185	0.53	-1.0
2,056,913	-		LRK53_RS09185	0.53	+0.4
2,056,913	-		LRK53_RS09185	0.53	+1.2
2,056,913	-		LRK53_RS09185	0.53	-2.3
2,056,913	-		LRK53_RS09185	0.53	+2.2
2,056,913	-		LRK53_RS09185	0.53	+1.9
2,056,913	-		LRK53_RS09185	0.53	+0.5
2,056,913	-		LRK53_RS09185	0.53	+2.5
2,057,342	-		LRK53_RS09185	0.78	-1.7
2,057,342	-		LRK53_RS09185	0.78	+1.2
2,057,452	+		LRK53_RS09185	0.85	-0.4
2,057,452	+		LRK53_RS09185	0.85	+1.4
2,057,545	+				+1.2
2,057,545	+				-0.8
2,057,545	+				+0.3
2,057,546	-				+0.6
2,057,705	+				-1.0
2,057,934	+		LRK53_RS09190	0.27	+2.6
2,057,935	-		LRK53_RS09190	0.27	+0.7
2,057,952	+		LRK53_RS09190	0.29	-0.0
2,057,952	+		LRK53_RS09190	0.29	-1.7
2,057,952	+		LRK53_RS09190	0.29	-2.2
2,057,952	+		LRK53_RS09190	0.29	-0.8
2,057,952	+		LRK53_RS09190	0.29	+0.3
2,057,952	+		LRK53_RS09190	0.29	+0.3
2,057,953	-		LRK53_RS09190	0.29	+1.6
2,057,953	-		LRK53_RS09190	0.29	+0.2
2,058,003	+		LRK53_RS09190	0.37	-0.7
2,058,003	+		LRK53_RS09190	0.37	+1.2
2,058,084	+		LRK53_RS09190	0.49	-0.3
2,058,084	+		LRK53_RS09190	0.49	+0.7
2,058,084	+		LRK53_RS09190	0.49	-1.8
2,058,084	+		LRK53_RS09190	0.49	+0.2
2,058,084	+		LRK53_RS09190	0.49	+1.2
2,058,084	+		LRK53_RS09190	0.49	+1.2
2,058,085	-		LRK53_RS09190	0.49	-0.3
2,058,085	-		LRK53_RS09190	0.49	-0.3
2,058,085	-		LRK53_RS09190	0.49	+0.2
2,058,085	-		LRK53_RS09190	0.49	-1.2
2,058,085	-		LRK53_RS09190	0.49	-0.2
2,058,270	+		LRK53_RS09190	0.76	-0.4
2,058,271	-		LRK53_RS09190	0.76	-1.4
2,058,294	+		LRK53_RS09190	0.80	-0.9
2,058,304	+		LRK53_RS09190	0.81	-1.4
2,058,318	+		LRK53_RS09190	0.83	+1.9
2,058,318	+		LRK53_RS09190	0.83	+0.3
2,058,318	+		LRK53_RS09190	0.83	+1.0
2,058,318	+		LRK53_RS09190	0.83	-1.5
2,058,318	+		LRK53_RS09190	0.83	-0.4
2,058,318	+		LRK53_RS09190	0.83	-0.1
2,058,318	+		LRK53_RS09190	0.83	-2.7
2,058,318	+		LRK53_RS09190	0.83	-0.0
2,058,318	+		LRK53_RS09190	0.83	-0.1
2,058,318	+		LRK53_RS09190	0.83	-3.9
2,058,318	+		LRK53_RS09190	0.83	-1.4
2,058,318	+		LRK53_RS09190	0.83	-0.7
2,058,319	-		LRK53_RS09190	0.83	+0.3
2,058,319	-		LRK53_RS09190	0.83	-0.6
2,058,319	-		LRK53_RS09190	0.83	-0.2
2,058,319	-		LRK53_RS09190	0.83	+1.2
2,058,319	-		LRK53_RS09190	0.83	+0.7
2,058,319	-		LRK53_RS09190	0.83	-0.7
2,058,319	-		LRK53_RS09190	0.83	+0.2
2,058,319	-		LRK53_RS09190	0.83	-2.0
2,058,319	-		LRK53_RS09190	0.83	-0.5
2,058,319	-		LRK53_RS09190	0.83	-0.8
2,058,319	-		LRK53_RS09190	0.83	-1.7
2,058,319	-		LRK53_RS09190	0.83	-1.4
2,058,319	-		LRK53_RS09190	0.83	-0.8
2,058,319	-		LRK53_RS09190	0.83	-1.1
2,058,319	-		LRK53_RS09190	0.83	+0.1
2,058,419	+				-1.4
2,058,419	+				-0.7
2,058,420	-				-0.7
2,058,420	-				+1.2
2,058,420	-				+0.2
2,058,420	-				+0.4
2,058,420	-				-1.7
2,058,420	-				-0.6
2,058,420	-				-0.1
2,058,420	-				-0.4
2,058,420	-				+0.3
2,058,420	-				+1.7
2,058,420	-				+1.2
2,058,420	-				-0.3
2,058,420	-				+0.2
2,058,420	-				+0.2
2,058,420	-				-0.5
2,058,420	-				+0.5
2,058,429	+				-2.3
2,058,429	+				-1.8
2,058,430	-				-0.7
2,058,472	-				-1.4
2,058,472	-				+0.4
2,058,546	+				-1.3
2,058,546	+				+0.3
2,058,712	+		LRK53_RS09195	0.15	+1.2
2,058,712	+		LRK53_RS09195	0.15	-1.2
2,058,712	+		LRK53_RS09195	0.15	+2.2
2,058,712	+		LRK53_RS09195	0.15	-1.3
2,058,712	+		LRK53_RS09195	0.15	-0.8
2,058,712	+		LRK53_RS09195	0.15	-0.7
2,058,712	+		LRK53_RS09195	0.15	-1.0
2,058,712	+		LRK53_RS09195	0.15	+1.2