Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS08710

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
1,956,372	+		LRK53_RS08705	0.35	-0.7
1,956,372	+		LRK53_RS08705	0.35	-0.5
1,956,372	+		LRK53_RS08705	0.35	-0.8
1,956,373	-		LRK53_RS08705	0.35	+0.7
1,956,373	-		LRK53_RS08705	0.35	+2.0
1,956,373	-		LRK53_RS08705	0.35	-0.8
1,956,373	-		LRK53_RS08705	0.35	+0.3
1,956,399	+		LRK53_RS08705	0.38	-0.8
1,956,399	+		LRK53_RS08705	0.38	+0.3
1,956,399	+		LRK53_RS08705	0.38	-1.1
1,956,399	+		LRK53_RS08705	0.38	-0.7
1,956,400	-		LRK53_RS08705	0.38	-0.4
1,956,400	-		LRK53_RS08705	0.38	-0.4
1,956,400	-		LRK53_RS08705	0.38	-2.5
1,956,400	-		LRK53_RS08705	0.38	-0.9
1,956,400	-		LRK53_RS08705	0.38	+0.2
1,956,400	-		LRK53_RS08705	0.38	-0.1
1,956,400	-		LRK53_RS08705	0.38	+0.6
1,956,400	-		LRK53_RS08705	0.38	-1.5
1,956,400	-		LRK53_RS08705	0.38	+1.2
1,956,402	+		LRK53_RS08705	0.38	+0.6
1,956,402	+		LRK53_RS08705	0.38	+0.3
1,956,446	+		LRK53_RS08705	0.43	-0.3
1,956,446	+		LRK53_RS08705	0.43	+0.5
1,956,446	+		LRK53_RS08705	0.43	-1.4
1,956,447	-		LRK53_RS08705	0.43	+0.5
1,956,447	-		LRK53_RS08705	0.43	+0.6
1,956,486	+		LRK53_RS08705	0.48	-1.1
1,956,780	+		LRK53_RS08705	0.82	-1.1
1,956,780	+		LRK53_RS08705	0.82	+2.2
1,956,780	+		LRK53_RS08705	0.82	-0.5
1,956,780	+		LRK53_RS08705	0.82	+1.7
1,956,780	+		LRK53_RS08705	0.82	-0.8
1,956,780	+		LRK53_RS08705	0.82	-0.2
1,956,781	-		LRK53_RS08705	0.83	+1.3
1,956,781	-		LRK53_RS08705	0.83	-1.4
1,956,781	-		LRK53_RS08705	0.83	+0.6
1,956,781	-		LRK53_RS08705	0.83	+0.2
1,956,781	-		LRK53_RS08705	0.83	-0.8
1,956,781	-		LRK53_RS08705	0.83	-0.8
1,956,781	-		LRK53_RS08705	0.83	-0.5
1,956,781	-		LRK53_RS08705	0.83	-1.4
1,956,781	-		LRK53_RS08705	0.83	-0.8
1,956,781	-		LRK53_RS08705	0.83	-0.9
1,956,939	+				-1.2
1,956,939	+				-1.8
1,956,939	+				-1.2
1,956,939	+				+1.8
1,956,939	+				+0.2
1,956,939	+				-1.4
1,956,939	+				-0.7
1,956,940	-				+0.2
1,956,940	-				-1.7
1,956,940	-				+0.3
1,956,940	-				+0.8
1,957,042	+				+1.7
1,957,042	+				-0.3
1,957,042	+				-0.8
1,957,042	+				-0.4
1,957,042	+				-0.4
1,957,043	-				+0.2
1,957,043	-				+1.5
1,957,043	-				+2.2
1,957,043	-				-0.1
1,957,043	-				-1.4
1,957,043	-				+0.2
1,957,043	-				-0.7
1,957,043	-				-0.2
1,957,043	-				-0.4
1,957,043	-				-0.3
1,957,043	-				-1.7
1,957,050	+				-0.9
1,957,197	+				+1.6
1,957,197	+				-0.6
1,957,213	+				-0.5
1,957,213	+				+0.8
1,957,297	+				-0.4
1,957,351	+				+0.1
1,957,352	-				-2.2
1,957,352	-				-0.5
1,957,352	-				-0.9
1,957,352	-				+0.4
1,957,454	+		LRK53_RS08710	0.18	-0.9
1,957,454	+		LRK53_RS08710	0.18	+1.0
1,957,455	-		LRK53_RS08710	0.18	+1.1
1,957,757	+		LRK53_RS08710	0.53	+0.4
1,957,758	-		LRK53_RS08710	0.53	-0.8
1,957,857	-		LRK53_RS08710	0.65	-0.5
1,957,942	-		LRK53_RS08710	0.75	+0.1
1,957,948	+		LRK53_RS08710	0.75	+0.6
1,957,948	+		LRK53_RS08710	0.75	+1.1
1,957,949	-		LRK53_RS08710	0.76	-2.2
1,957,949	-		LRK53_RS08710	0.76	+1.1
1,957,978	+		LRK53_RS08710	0.79	+1.1
1,958,048	+		LRK53_RS08710	0.87	-0.4
1,958,048	+		LRK53_RS08710	0.87	+0.1
1,958,049	-		LRK53_RS08710	0.87	+0.4
1,958,049	-		LRK53_RS08710	0.87	+1.7
1,958,049	-		LRK53_RS08710	0.87	+0.1
1,958,049	-		LRK53_RS08710	0.87	+0.1
1,958,049	-		LRK53_RS08710	0.87	-0.2
1,958,049	-		LRK53_RS08710	0.87	-0.7
1,958,049	-		LRK53_RS08710	0.87	-1.0
1,958,050	+		LRK53_RS08710	0.87	+2.1
1,958,050	+		LRK53_RS08710	0.87	+0.1
1,958,050	+		LRK53_RS08710	0.87	+1.5
1,958,050	+		LRK53_RS08710	0.87	+0.3
1,958,050	+		LRK53_RS08710	0.87	-0.4
1,958,050	+		LRK53_RS08710	0.87	-1.9
1,958,050	+		LRK53_RS08710	0.87	+0.0
1,958,050	+		LRK53_RS08710	0.87	-0.2
1,958,050	+		LRK53_RS08710	0.87	-1.3
1,958,050	+		LRK53_RS08710	0.87	-0.7
1,958,050	+		LRK53_RS08710	0.87	+0.3
1,958,050	+		LRK53_RS08710	0.87	-0.3
1,958,050	+		LRK53_RS08710	0.87	+0.7
1,958,050	+		LRK53_RS08710	0.87	+0.3
1,958,050	+		LRK53_RS08710	0.87	+1.5
1,958,050	+		LRK53_RS08710	0.87	+0.4
1,958,050	+		LRK53_RS08710	0.87	-0.4
1,958,050	+		LRK53_RS08710	0.87	-0.1
1,958,051	-		LRK53_RS08710	0.87	-0.1
1,958,051	-		LRK53_RS08710	0.87	+2.1
1,958,051	-		LRK53_RS08710	0.87	-1.2
1,958,051	-		LRK53_RS08710	0.87	-1.4
1,958,051	-		LRK53_RS08710	0.87	-1.7
1,958,051	-		LRK53_RS08710	0.87	-1.3
1,958,051	-		LRK53_RS08710	0.87	-0.4
1,958,051	-		LRK53_RS08710	0.87	-2.3
1,958,051	-		LRK53_RS08710	0.87	-0.7
1,958,051	-		LRK53_RS08710	0.87	-0.3
1,958,051	-		LRK53_RS08710	0.87	+0.2
1,958,051	-		LRK53_RS08710	0.87	-0.7
1,958,051	-		LRK53_RS08710	0.87	-0.4
1,958,051	-		LRK53_RS08710	0.87	+0.9
1,958,051	-		LRK53_RS08710	0.87	+0.1
1,958,051	-		LRK53_RS08710	0.87	-1.9
1,958,051	-		LRK53_RS08710	0.87	+2.1
1,958,104	+				+0.7
1,958,104	+				+1.1
1,958,104	+				-0.6
1,958,105	-				-0.4
1,958,105	-				-0.9
1,958,159	+				-1.5
1,958,160	-				+1.6
1,958,160	-				-0.4
1,958,186	-				-0.6
1,958,187	+				+0.9
1,958,187	+				-0.2
1,958,187	+				-0.9
1,958,187	+				+0.3
1,958,187	+				+2.1
1,958,187	+				-0.3
1,958,187	+				-0.6
1,958,188	-				+0.4
1,958,188	-				-0.0
1,958,188	-				+0.5
1,958,188	-				-0.2
1,958,188	-				-0.0
1,958,188	-				+2.1
1,958,190	-				-0.6
1,958,190	-				-0.4
1,958,190	-				+0.4
1,958,304	+				-1.7
1,958,305	-				-1.4
1,958,357	+		LRK53_RS08715	0.12	+1.1
1,958,357	+		LRK53_RS08715	0.12	-0.6
1,958,357	+		LRK53_RS08715	0.12	-1.5
1,958,358	-		LRK53_RS08715	0.12	-0.3
1,958,358	-		LRK53_RS08715	0.12	+0.1
1,958,358	-		LRK53_RS08715	0.12	+1.6
1,958,358	-		LRK53_RS08715	0.12	+2.5
1,958,406	+		LRK53_RS08715	0.15	-0.4
1,958,406	+		LRK53_RS08715	0.15	-1.2
1,958,407	-		LRK53_RS08715	0.15	-3.2
1,958,407	-		LRK53_RS08715	0.15	+0.5
1,958,407	-		LRK53_RS08715	0.15	-0.9
1,958,417	+		LRK53_RS08715	0.16	-1.2
1,958,417	+		LRK53_RS08715	0.16	-0.4
1,958,417	+		LRK53_RS08715	0.16	-0.0
1,958,418	-		LRK53_RS08715	0.16	+1.7
1,958,418	-		LRK53_RS08715	0.16	-0.3
1,958,418	-		LRK53_RS08715	0.16	-1.0
1,958,521	+		LRK53_RS08715	0.22	-0.4
1,958,522	-		LRK53_RS08715	0.22	+1.1
1,958,614	-		LRK53_RS08715	0.28	-1.3
1,958,662	+		LRK53_RS08715	0.31	+1.1
1,958,663	-		LRK53_RS08715	0.31	-0.1
1,958,663	-		LRK53_RS08715	0.31	-0.8
1,958,673	-		LRK53_RS08715	0.31	+0.5
1,958,673	-		LRK53_RS08715	0.31	-0.9
1,958,786	+		LRK53_RS08715	0.38	+1.1
1,958,786	+		LRK53_RS08715	0.38	-1.3
1,958,787	-		LRK53_RS08715	0.38	+0.8
1,958,787	-		LRK53_RS08715	0.38	-0.9
1,958,807	+		LRK53_RS08715	0.39	-1.9
1,958,808	-		LRK53_RS08715	0.39	+1.1
1,958,810	+		LRK53_RS08715	0.39	+0.1
1,958,810	+		LRK53_RS08715	0.39	+3.1
1,958,810	+		LRK53_RS08715	0.39	-0.6
1,958,810	+		LRK53_RS08715	0.39	-0.1
1,958,810	+		LRK53_RS08715	0.39	+0.4
1,958,810	+		LRK53_RS08715	0.39	+1.1
1,958,810	+		LRK53_RS08715	0.39	-0.4
1,958,810	+		LRK53_RS08715	0.39	-0.6
1,958,810	+		LRK53_RS08715	0.39	+0.1
1,958,810	+		LRK53_RS08715	0.39	-0.6
1,958,810	+		LRK53_RS08715	0.39	-0.1
1,958,810	+		LRK53_RS08715	0.39	-2.0
1,958,811	-		LRK53_RS08715	0.39	-0.1
1,958,811	-		LRK53_RS08715	0.39	-2.2
1,958,811	-		LRK53_RS08715	0.39	-1.0
1,958,811	-		LRK53_RS08715	0.39	+0.5
1,958,811	-		LRK53_RS08715	0.39	-0.5
1,958,811	-		LRK53_RS08715	0.39	+0.0
1,958,811	-		LRK53_RS08715	0.39	-0.4
1,958,811	-		LRK53_RS08715	0.39	-0.9
1,958,845	+		LRK53_RS08715	0.41	-1.2
1,958,845	+		LRK53_RS08715	0.41	-1.2
1,958,845	+		LRK53_RS08715	0.41	-0.9
1,958,846	-		LRK53_RS08715	0.42	-0.9
1,958,846	-		LRK53_RS08715	0.42	-0.5
1,958,846	-		LRK53_RS08715	0.42	-2.0
1,958,906	+		LRK53_RS08715	0.45	-0.3
1,958,907	-		LRK53_RS08715	0.45	-0.5
1,958,907	-		LRK53_RS08715	0.45	-0.3
1,958,907	-		LRK53_RS08715	0.45	-0.4
1,958,907	-		LRK53_RS08715	0.45	-0.3
1,959,004	+		LRK53_RS08715	0.51	-2.6
1,959,005	-		LRK53_RS08715	0.51	+0.1
1,959,050	+		LRK53_RS08715	0.54	+0.6
1,959,050	+		LRK53_RS08715	0.54	-1.8
1,959,137	+		LRK53_RS08715	0.59	+0.7
1,959,137	+		LRK53_RS08715	0.59	-0.4