Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS07190

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
1,618,341	+				-0.2
1,618,341	+				+1.5
1,618,341	+				+0.4
1,618,342	-				+1.1
1,618,342	-				+1.2
1,619,003	+				+0.6
1,619,003	+				+0.1
1,619,004	-				-0.9
1,619,004	-				-1.3
1,619,004	-				-0.5
1,619,040	+				-0.1
1,619,040	+				-1.7
1,619,040	+				+0.2
1,619,040	+				+0.1
1,619,040	+				+0.7
1,619,040	+				-0.2
1,619,040	+				-0.6
1,619,041	-				+1.1
1,619,041	-				+0.1
1,619,041	-				-0.4
1,619,067	+				+0.1
1,619,067	+				-0.9
1,619,067	+				-0.9
1,619,067	+				-0.4
1,619,067	+				+1.1
1,619,067	+				-0.7
1,619,067	+				-1.4
1,619,067	+				-0.2
1,619,067	+				+0.1
1,619,067	+				+0.0
1,619,067	+				-0.6
1,619,067	+				-0.4
1,619,067	+				+0.1
1,619,067	+				+0.1
1,619,067	+				+0.1
1,619,067	+				-0.9
1,619,067	+				-0.2
1,619,067	+				+1.1
1,619,067	+				+2.7
1,619,067	+				-1.6
1,619,067	+				+0.3
1,619,067	+				-0.3
1,619,067	+				-1.4
1,619,067	+				+1.3
1,619,067	+				-0.9
1,619,067	+				-2.3
1,619,067	+				+1.1
1,619,067	+				-1.9
1,619,068	-				-1.9
1,619,068	-				+0.3
1,619,068	-				-0.4
1,619,068	-				+1.5
1,619,068	-				+3.1
1,619,068	-				+0.7
1,619,068	-				-2.1
1,619,068	-				-0.4
1,619,068	-				-0.1
1,619,068	-				-1.7
1,619,068	-				+0.5
1,619,068	-				-2.3
1,619,068	-				-1.8
1,619,068	-				+0.8
1,619,068	-				+1.1
1,619,068	-				-0.9
1,619,068	-				-0.4
1,619,068	-				-0.6
1,619,068	-				+0.1
1,619,068	-				+1.6
1,619,068	-				+0.1
1,619,068	-				-1.9
1,619,068	-				-1.2
1,619,068	-				+0.1
1,619,068	-				-0.2
1,619,165	-				+1.1
1,619,656	+		LRK53_RS07190	0.31	+2.7
1,619,657	-		LRK53_RS07190	0.31	+1.4
1,619,657	-		LRK53_RS07190	0.31	-0.9
1,619,692	+		LRK53_RS07190	0.34	-1.4
1,619,692	+		LRK53_RS07190	0.34	+1.1
1,619,692	+		LRK53_RS07190	0.34	+0.7
1,619,692	+		LRK53_RS07190	0.34	+1.1
1,619,693	-		LRK53_RS07190	0.34	-0.3
1,619,693	-		LRK53_RS07190	0.34	+0.6
1,619,693	-		LRK53_RS07190	0.34	-0.3
1,619,693	-		LRK53_RS07190	0.34	-2.4
1,619,693	-		LRK53_RS07190	0.34	+0.4
1,619,693	-		LRK53_RS07190	0.34	+0.1
1,619,719	+		LRK53_RS07190	0.35	-0.4
1,619,719	+		LRK53_RS07190	0.35	-1.0
1,619,720	-		LRK53_RS07190	0.36	-0.4
1,619,740	+		LRK53_RS07190	0.37	-0.4
1,619,740	+		LRK53_RS07190	0.37	+0.6
1,619,741	-		LRK53_RS07190	0.37	+0.1
1,619,741	-		LRK53_RS07190	0.37	-2.0
1,619,912	-		LRK53_RS07190	0.48	-1.4
1,619,912	-		LRK53_RS07190	0.48	-0.6
1,619,912	-		LRK53_RS07190	0.48	-1.4
1,619,912	-		LRK53_RS07190	0.48	-0.9
1,619,912	-		LRK53_RS07190	0.48	+0.5
1,619,912	-		LRK53_RS07190	0.48	+0.2
1,619,912	-		LRK53_RS07190	0.48	-1.0
1,620,070	+		LRK53_RS07190	0.58	+0.6
1,620,070	+		LRK53_RS07190	0.58	+0.0
1,620,071	-		LRK53_RS07190	0.58	-1.4
1,620,286	+		LRK53_RS07190	0.72	+0.3
1,620,287	-		LRK53_RS07190	0.72	-1.4
1,620,287	-		LRK53_RS07190	0.72	-0.0
1,620,287	-		LRK53_RS07190	0.72	-1.2
1,620,287	-		LRK53_RS07190	0.72	+1.1
1,620,287	-		LRK53_RS07190	0.72	+1.1
1,620,318	-		LRK53_RS07190	0.74	-0.4
1,620,343	+		LRK53_RS07190	0.75	+1.2
1,620,343	+		LRK53_RS07190	0.75	-1.0
1,620,343	+		LRK53_RS07190	0.75	+1.4
1,620,343	+		LRK53_RS07190	0.75	+0.4
1,620,343	+		LRK53_RS07190	0.75	+0.1
1,620,343	+		LRK53_RS07190	0.75	-1.9
1,620,344	-		LRK53_RS07190	0.75	-1.2
1,620,344	-		LRK53_RS07190	0.75	-0.6
1,620,344	-		LRK53_RS07190	0.75	+0.0
1,620,344	-		LRK53_RS07190	0.75	+1.5
1,620,344	-		LRK53_RS07190	0.75	-0.2
1,620,344	-		LRK53_RS07190	0.75	-1.7
1,620,344	-		LRK53_RS07190	0.75	+0.4
1,620,344	-		LRK53_RS07190	0.75	-0.3
1,620,344	-		LRK53_RS07190	0.75	-1.2
1,620,344	-		LRK53_RS07190	0.75	-0.2
1,620,452	-		LRK53_RS07190	0.82	-0.1
1,620,452	-		LRK53_RS07190	0.82	+0.7
1,620,641	-				-0.7
1,621,109	+				+0.3
1,621,109	+				-0.3
1,621,109	+				-0.4
1,621,109	+				-1.2
1,621,109	+				-1.1
1,621,194	+		LRK53_RS07200	0.20	-0.7
1,621,195	-		LRK53_RS07200	0.21	+0.1
1,621,262	+		LRK53_RS07200	0.43	-1.8
1,621,263	-		LRK53_RS07200	0.43	-0.1
1,621,263	-		LRK53_RS07200	0.43	-1.9
1,621,263	-		LRK53_RS07200	0.43	-0.9
1,621,372	-		LRK53_RS07200	0.80	-0.4
1,621,372	-		LRK53_RS07200	0.80	-2.3
1,621,438	+				+0.6
1,621,478	-				+0.1
1,621,483	+				-0.1
1,621,483	+				+0.2
1,621,483	+				+0.1
1,621,483	+				-0.6
1,621,484	-				-2.6
1,621,486	+				+2.1
1,621,486	+				+0.1
1,621,486	+				-0.5
1,621,486	+				-0.1
1,621,486	+				-2.0
1,621,486	+				+0.1
1,621,486	+				-1.1
1,621,487	-				+1.1
1,621,487	-				+1.1
1,621,487	-				-0.1
1,621,487	-				-1.2
1,621,487	-				+3.1
1,621,495	+				-0.1
1,621,495	+				-1.9
1,621,495	+				-0.4
1,621,496	-				+1.1
1,621,518	+				-0.7
1,621,519	+				-2.2
1,621,519	+				-0.9
1,621,519	+				-0.2
1,621,519	+				+1.1
1,621,519	+				+2.1
1,621,519	+				-0.4
1,621,519	+				-0.7
1,621,519	+				-2.0
1,621,519	+				+0.4
1,621,520	-				-0.4
1,621,520	-				-1.2
1,621,520	-				+1.9
1,621,520	-				-0.2
1,621,520	-				+0.1
1,621,520	-				-1.7
1,621,520	-				+2.7
1,621,520	-				-1.0
1,621,520	-				+0.4
1,621,520	-				-1.4
1,621,520	-				-0.2
1,621,520	-				-1.7
1,621,520	-				-1.4
1,621,520	-				-0.4
1,621,576	+				-1.9
1,621,577	-				+1.1
1,621,603	+				+2.7
1,621,603	+				+0.1
1,621,603	+				-1.7
1,621,603	+				+0.7
1,621,603	+				-1.2
1,621,603	+				-0.2
1,621,603	+				+1.1
1,621,603	+				-2.2
1,621,604	-				+1.8
1,621,604	-				-0.4
1,621,604	-				-2.0
1,621,604	-				-0.7
1,621,604	-				-0.2
1,621,627	+				-0.5
1,621,627	+				-1.2
1,621,627	+				+0.1
1,621,628	-				+3.1
1,621,628	-				+0.0
1,621,628	-				-2.9
1,621,628	-				+0.1
1,621,628	-				-1.2
1,621,628	-				+1.1
1,621,628	-				-0.1
1,621,628	-				+0.1
1,621,628	-				-0.9
1,621,639	+				-1.2
1,621,639	+				+2.1
1,621,639	+				+2.1
1,621,654	+		LRK53_RS07205	0.10	+0.4
1,621,655	-		LRK53_RS07205	0.10	-0.4
1,621,655	-		LRK53_RS07205	0.10	-0.2
1,621,708	+		LRK53_RS07205	0.13	-0.0
1,621,708	+		LRK53_RS07205	0.13	-0.3
1,621,709	-		LRK53_RS07205	0.13	-2.0
1,621,709	-		LRK53_RS07205	0.13	-0.1
1,621,709	-		LRK53_RS07205	0.13	-1.2
1,621,709	-		LRK53_RS07205	0.13	-0.1
1,621,709	-		LRK53_RS07205	0.13	-1.2
1,621,709	-		LRK53_RS07205	0.13	+1.1
1,621,709	-		LRK53_RS07205	0.13	+1.7