Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS06200

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
1,418,742	+				+0.1
1,418,742	+				-0.7
1,418,742	+				-3.5
1,418,742	+				-0.9
1,418,742	+				-0.4
1,418,742	+				+1.7
1,418,742	+				-0.9
1,418,743	-				+1.3
1,418,743	-				-0.4
1,418,743	-				-0.7
1,418,743	-				-0.0
1,418,743	-				+2.3
1,418,743	-				-0.1
1,418,743	-				-0.3
1,418,743	-				-0.2
1,418,743	-				+0.1
1,418,743	-				-0.8
1,418,768	-				+0.1
1,418,844	+		LRK53_RS06190	0.21	-1.1
1,418,845	-		LRK53_RS06190	0.23	+1.1
1,418,878	+				+1.1
1,418,878	+				-0.5
1,418,879	-				-0.4
1,418,879	-				-1.4
1,418,890	+				-0.5
1,418,890	+				+0.0
1,418,890	+				-0.9
1,418,890	+				-1.4
1,418,890	+				-1.0
1,418,890	+				+0.1
1,418,890	+				+1.6
1,418,890	+				-0.2
1,418,890	+				-1.3
1,418,890	+				-1.9
1,418,891	-				-0.9
1,418,891	-				-1.3
1,418,891	-				-1.2
1,418,891	-				-0.1
1,418,891	-				+1.1
1,418,891	-				-0.4
1,418,891	-				-0.3
1,418,891	-				+2.1
1,418,891	-				-0.2
1,418,891	-				-1.0
1,418,891	-				+0.6
1,418,891	-				+1.1
1,418,946	+		LRK53_RS06195	0.14	-0.3
1,418,946	+		LRK53_RS06195	0.14	+0.7
1,419,010	+		LRK53_RS06195	0.25	-0.9
1,419,061	+		LRK53_RS06195	0.33	-0.2
1,419,061	+		LRK53_RS06195	0.33	-0.7
1,419,061	+		LRK53_RS06195	0.33	+1.1
1,419,061	+		LRK53_RS06195	0.33	+0.3
1,419,061	+		LRK53_RS06195	0.33	+1.1
1,419,061	+		LRK53_RS06195	0.33	+0.1
1,419,061	+		LRK53_RS06195	0.33	-1.2
1,419,062	-		LRK53_RS06195	0.34	-0.6
1,419,062	-		LRK53_RS06195	0.34	-0.4
1,419,062	-		LRK53_RS06195	0.34	-0.4
1,419,062	-		LRK53_RS06195	0.34	-0.8
1,419,062	-		LRK53_RS06195	0.34	-1.4
1,419,302	+		LRK53_RS06195	0.74	+1.7
1,419,302	+		LRK53_RS06195	0.74	-0.9
1,419,303	-		LRK53_RS06195	0.74	-1.2
1,419,303	-		LRK53_RS06195	0.74	-1.4
1,419,304	+		LRK53_RS06195	0.74	-1.4
1,419,304	+		LRK53_RS06195	0.74	+0.1
1,419,304	+		LRK53_RS06195	0.74	+1.1
1,419,304	+		LRK53_RS06195	0.74	-0.2
1,419,304	+		LRK53_RS06195	0.74	-0.9
1,419,304	+		LRK53_RS06195	0.74	-0.9
1,419,304	+		LRK53_RS06195	0.74	-1.2
1,419,304	+		LRK53_RS06195	0.74	+0.7
1,419,304	+		LRK53_RS06195	0.74	-0.9
1,419,304	+		LRK53_RS06195	0.74	-0.9
1,419,305	-		LRK53_RS06195	0.74	-0.4
1,419,320	-		LRK53_RS06195	0.77	+0.8
1,419,320	-		LRK53_RS06195	0.77	-0.9
1,419,320	-		LRK53_RS06195	0.77	+1.1
1,419,432	+				-0.4
1,419,433	-				-0.9
1,419,694	+				+0.1
1,419,764	-				+0.6
1,419,845	-				+0.1
1,419,880	+				-0.1
1,419,974	-		LRK53_RS06200	0.16	+0.9
1,419,974	-		LRK53_RS06200	0.16	-2.4
1,420,063	-		LRK53_RS06200	0.22	+0.6
1,420,105	+		LRK53_RS06200	0.24	-0.5
1,420,105	+		LRK53_RS06200	0.24	+0.6
1,420,105	+		LRK53_RS06200	0.24	-0.8
1,420,106	-		LRK53_RS06200	0.24	-0.9
1,420,106	-		LRK53_RS06200	0.24	+0.1
1,420,106	-		LRK53_RS06200	0.24	-1.2
1,420,106	-		LRK53_RS06200	0.24	-0.6
1,420,108	+		LRK53_RS06200	0.25	-0.9
1,420,108	+		LRK53_RS06200	0.25	-0.6
1,420,108	+		LRK53_RS06200	0.25	-1.7
1,420,108	+		LRK53_RS06200	0.25	-0.2
1,420,108	+		LRK53_RS06200	0.25	-1.7
1,420,108	+		LRK53_RS06200	0.25	-1.0
1,420,108	+		LRK53_RS06200	0.25	-2.2
1,420,108	+		LRK53_RS06200	0.25	-0.4
1,420,109	-		LRK53_RS06200	0.25	-2.0
1,420,109	-		LRK53_RS06200	0.25	-0.4
1,420,109	-		LRK53_RS06200	0.25	-0.6
1,420,193	-		LRK53_RS06200	0.30	-0.2
1,420,315	+		LRK53_RS06200	0.38	+0.3
1,420,316	-		LRK53_RS06200	0.38	+2.7
1,420,504	+		LRK53_RS06200	0.51	+1.9
1,420,505	-		LRK53_RS06200	0.51	-1.4
1,420,811	-		LRK53_RS06200	0.71	-0.0
1,420,876	+		LRK53_RS06200	0.75	-2.1
1,421,152	+				+1.0
1,421,152	+				-0.3
1,421,152	+				-0.1
1,421,152	+				-0.1
1,421,152	+				-1.7
1,421,152	+				-0.4
1,421,153	-				+0.3
1,421,153	-				-1.4
1,421,153	-				-1.0
1,421,153	-				-0.0
1,421,153	-				-1.9
1,421,200	+				+0.0
1,421,211	-				+0.0
1,421,211	-				+0.1
1,421,255	+				+0.1
1,421,255	+				-3.3
1,421,256	-				-1.0
1,421,284	+				+0.7
1,421,284	+				-1.0
1,421,284	+				+1.6
1,421,285	-				+0.8
1,421,285	-				-0.7
1,421,285	-				+0.7
1,421,285	-				+0.1
1,421,285	-				+0.8
1,421,285	-				-0.5
1,421,285	-				+0.1
1,421,285	-				-2.0
1,421,367	+				+0.7
1,421,390	+				-0.7
1,421,390	+				-0.3
1,421,418	+				-1.0
1,421,461	+				+0.4
1,421,610	-				+1.3
1,421,714	-		LRK53_RS06205	0.11	-0.4
1,421,758	+		LRK53_RS06205	0.14	-0.7
1,421,758	+		LRK53_RS06205	0.14	-2.9
1,421,758	+		LRK53_RS06205	0.14	+1.1
1,421,758	+		LRK53_RS06205	0.14	+1.1
1,421,758	+		LRK53_RS06205	0.14	-0.7
1,421,758	+		LRK53_RS06205	0.14	+1.4
1,421,758	+		LRK53_RS06205	0.14	-0.2
1,421,758	+		LRK53_RS06205	0.14	+0.6
1,421,758	+		LRK53_RS06205	0.14	-0.4
1,421,759	-		LRK53_RS06205	0.14	-0.8
1,421,759	-		LRK53_RS06205	0.14	-1.4
1,421,759	-		LRK53_RS06205	0.14	-0.3
1,421,759	-		LRK53_RS06205	0.14	-0.4
1,421,759	-		LRK53_RS06205	0.14	-0.4
1,421,759	-		LRK53_RS06205	0.14	-1.4
1,421,759	-		LRK53_RS06205	0.14	-2.0
1,421,759	-		LRK53_RS06205	0.14	-0.9
1,421,759	-		LRK53_RS06205	0.14	-1.0
1,421,759	-		LRK53_RS06205	0.14	+1.6
1,421,759	-		LRK53_RS06205	0.14	-0.7
1,421,792	+		LRK53_RS06205	0.15	+1.1
1,421,792	+		LRK53_RS06205	0.15	-1.7
1,421,793	-		LRK53_RS06205	0.16	-1.9
1,421,836	-		LRK53_RS06205	0.18	-0.4
1,421,971	+		LRK53_RS06205	0.25	-0.7
1,421,971	+		LRK53_RS06205	0.25	-0.4
1,421,971	+		LRK53_RS06205	0.25	-0.4
1,421,971	+		LRK53_RS06205	0.25	-0.9
1,421,971	+		LRK53_RS06205	0.25	-0.4
1,421,971	+		LRK53_RS06205	0.25	+0.6
1,421,971	+		LRK53_RS06205	0.25	-0.4
1,421,972	-		LRK53_RS06205	0.25	-0.9
1,421,972	-		LRK53_RS06205	0.25	-1.4
1,421,972	-		LRK53_RS06205	0.25	+1.1
1,421,972	-		LRK53_RS06205	0.25	+0.1
1,421,972	-		LRK53_RS06205	0.25	-1.7
1,421,972	-		LRK53_RS06205	0.25	-0.9
1,421,972	-		LRK53_RS06205	0.25	+1.1
1,421,972	-		LRK53_RS06205	0.25	-0.7
1,421,972	-		LRK53_RS06205	0.25	+1.1
1,421,974	+		LRK53_RS06205	0.25	-0.3
1,421,974	+		LRK53_RS06205	0.25	-0.9
1,421,975	-		LRK53_RS06205	0.25	-0.9