Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS06150

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
1,411,909	+		LRK53_RS06145	0.89	-2.3
1,411,909	+		LRK53_RS06145	0.89	+0.8
1,411,910	-		LRK53_RS06145	0.89	+1.0
1,411,910	-		LRK53_RS06145	0.89	-1.2
1,411,910	-		LRK53_RS06145	0.89	+1.8
1,411,911	+		LRK53_RS06145	0.90	-0.9
1,411,911	+		LRK53_RS06145	0.90	-0.5
1,411,911	+		LRK53_RS06145	0.90	-0.2
1,411,911	+		LRK53_RS06145	0.90	-0.4
1,411,911	+		LRK53_RS06145	0.90	-1.7
1,411,911	+		LRK53_RS06145	0.90	+1.2
1,411,911	+		LRK53_RS06145	0.90	-0.2
1,411,911	+		LRK53_RS06145	0.90	-0.6
1,411,911	+		LRK53_RS06145	0.90	-1.7
1,411,911	+		LRK53_RS06145	0.90	-0.0
1,411,911	+		LRK53_RS06145	0.90	-1.2
1,411,911	+		LRK53_RS06145	0.90	+0.2
1,411,911	+		LRK53_RS06145	0.90	-2.8
1,411,911	+		LRK53_RS06145	0.90	-0.9
1,411,911	+		LRK53_RS06145	0.90	-1.7
1,411,911	+		LRK53_RS06145	0.90	-1.2
1,411,911	+		LRK53_RS06145	0.90	-0.8
1,411,912	-		LRK53_RS06145	0.90	-1.0
1,411,912	-		LRK53_RS06145	0.90	+0.1
1,411,912	-		LRK53_RS06145	0.90	+0.6
1,411,912	-		LRK53_RS06145	0.90	-0.4
1,411,912	-		LRK53_RS06145	0.90	+1.2
1,411,912	-		LRK53_RS06145	0.90	-2.1
1,411,912	-		LRK53_RS06145	0.90	-0.6
1,411,912	-		LRK53_RS06145	0.90	+0.4
1,411,912	-		LRK53_RS06145	0.90	-0.4
1,411,912	-		LRK53_RS06145	0.90	+2.5
1,411,912	-		LRK53_RS06145	0.90	-1.9
1,411,912	-		LRK53_RS06145	0.90	-0.4
1,411,912	-		LRK53_RS06145	0.90	-0.8
1,411,912	-		LRK53_RS06145	0.90	+0.2
1,411,912	-		LRK53_RS06145	0.90	-0.3
1,412,089	+				+1.2
1,412,089	+				-0.0
1,412,090	-				-0.3
1,412,090	-				-0.8
1,412,095	+				+1.2
1,412,095	+				-0.6
1,412,095	+				+0.3
1,412,095	+				-0.8
1,412,095	+				-0.1
1,412,096	-				-0.4
1,412,096	-				+0.2
1,412,096	-				-0.7
1,412,096	-				+0.3
1,412,096	-				+1.7
1,412,148	-				-1.8
1,412,174	-				-0.5
1,412,174	-				-0.4
1,412,174	-				+0.6
1,412,174	-				-0.2
1,412,174	-				-0.4
1,412,174	-				+0.3
1,412,174	-				-1.3
1,412,410	+				-0.2
1,412,417	-				-0.4
1,412,481	+				-0.1
1,412,541	+				+0.9
1,412,559	-				+0.1
1,412,559	-				+1.2
1,412,583	+				+0.7
1,412,583	+				-0.9
1,412,584	-				-0.3
1,412,584	-				-1.4
1,412,584	-				-1.6
1,412,584	-				-0.8
1,412,596	-				-2.7
1,412,596	-				-2.3
1,412,636	+				-1.7
1,412,636	+				-0.3
1,412,637	-				-1.8
1,412,642	+				-1.8
1,412,723	+				-0.6
1,412,728	-				-0.3
1,412,754	+				-0.4
1,412,755	+				-0.8
1,412,755	+				+0.6
1,412,755	+				-0.4
1,412,755	+				-0.8
1,412,755	+				-0.0
1,412,755	+				+2.2
1,412,756	-				+2.4
1,412,756	-				-1.0
1,412,756	-				+0.2
1,412,756	-				-0.8
1,412,876	+		LRK53_RS06150	0.16	-1.3
1,412,876	+		LRK53_RS06150	0.16	-1.0
1,412,876	+		LRK53_RS06150	0.16	+1.2
1,412,877	-		LRK53_RS06150	0.16	-0.7
1,412,905	-		LRK53_RS06150	0.19	+1.1
1,412,996	+		LRK53_RS06150	0.30	-0.2
1,412,997	-		LRK53_RS06150	0.30	-0.1
1,413,042	+		LRK53_RS06150	0.36	-1.4
1,413,042	+		LRK53_RS06150	0.36	-0.8
1,413,042	+		LRK53_RS06150	0.36	+1.6
1,413,042	+		LRK53_RS06150	0.36	-0.1
1,413,042	+		LRK53_RS06150	0.36	-0.3
1,413,042	+		LRK53_RS06150	0.36	+0.7
1,413,042	+		LRK53_RS06150	0.36	-1.8
1,413,042	+		LRK53_RS06150	0.36	+2.2
1,413,042	+		LRK53_RS06150	0.36	-0.4
1,413,043	-		LRK53_RS06150	0.36	-1.8
1,413,043	-		LRK53_RS06150	0.36	+0.8
1,413,043	-		LRK53_RS06150	0.36	+0.2
1,413,043	-		LRK53_RS06150	0.36	+0.2
1,413,043	-		LRK53_RS06150	0.36	-0.8
1,413,043	-		LRK53_RS06150	0.36	-0.7
1,413,043	-		LRK53_RS06150	0.36	+1.2
1,413,043	-		LRK53_RS06150	0.36	+1.2
1,413,043	-		LRK53_RS06150	0.36	-1.0
1,413,043	-		LRK53_RS06150	0.36	+1.2
1,413,043	-		LRK53_RS06150	0.36	-0.3
1,413,054	+		LRK53_RS06150	0.37	-0.8
1,413,054	+		LRK53_RS06150	0.37	+1.2
1,413,054	+		LRK53_RS06150	0.37	-1.1
1,413,054	+		LRK53_RS06150	0.37	+3.2
1,413,054	+		LRK53_RS06150	0.37	+0.2
1,413,054	+		LRK53_RS06150	0.37	+0.2
1,413,054	+		LRK53_RS06150	0.37	-0.7
1,413,054	+		LRK53_RS06150	0.37	-1.2
1,413,055	-		LRK53_RS06150	0.37	-0.0
1,413,055	-		LRK53_RS06150	0.37	-0.4
1,413,055	-		LRK53_RS06150	0.37	+0.2
1,413,138	+		LRK53_RS06150	0.47	-2.0
1,413,138	+		LRK53_RS06150	0.47	-0.0
1,413,138	+		LRK53_RS06150	0.47	-0.4
1,413,138	+		LRK53_RS06150	0.47	-0.4
1,413,139	-		LRK53_RS06150	0.47	-0.3
1,413,139	-		LRK53_RS06150	0.47	-1.2
1,413,139	-		LRK53_RS06150	0.47	+1.2
1,413,139	-		LRK53_RS06150	0.47	-1.1
1,413,174	+		LRK53_RS06150	0.51	+0.2
1,413,174	+		LRK53_RS06150	0.51	+0.1
1,413,174	+		LRK53_RS06150	0.51	-0.4
1,413,174	+		LRK53_RS06150	0.51	-0.8
1,413,174	+		LRK53_RS06150	0.51	+0.6
1,413,174	+		LRK53_RS06150	0.51	+1.2
1,413,174	+		LRK53_RS06150	0.51	-0.1
1,413,174	+		LRK53_RS06150	0.51	+1.2
1,413,175	-		LRK53_RS06150	0.52	-1.2
1,413,175	-		LRK53_RS06150	0.52	+1.5
1,413,175	-		LRK53_RS06150	0.52	-0.8
1,413,332	+		LRK53_RS06150	0.70	+0.3
1,413,335	+		LRK53_RS06150	0.71	+1.2
1,413,335	+		LRK53_RS06150	0.71	+0.3
1,413,335	+		LRK53_RS06150	0.71	+0.3
1,413,335	+		LRK53_RS06150	0.71	-1.7
1,413,335	+		LRK53_RS06150	0.71	+0.8
1,413,335	+		LRK53_RS06150	0.71	+0.9
1,413,335	+		LRK53_RS06150	0.71	-0.7
1,413,335	+		LRK53_RS06150	0.71	-0.7
1,413,335	+		LRK53_RS06150	0.71	-0.8
1,413,335	+		LRK53_RS06150	0.71	+0.6
1,413,335	+		LRK53_RS06150	0.71	-1.7
1,413,335	+		LRK53_RS06150	0.71	-0.5
1,413,335	+		LRK53_RS06150	0.71	-0.7
1,413,335	+		LRK53_RS06150	0.71	-1.2
1,413,335	+		LRK53_RS06150	0.71	+0.1
1,413,335	+		LRK53_RS06150	0.71	+1.0
1,413,336	-		LRK53_RS06150	0.71	+1.2
1,413,336	-		LRK53_RS06150	0.71	-1.3
1,413,336	-		LRK53_RS06150	0.71	+0.7
1,413,336	-		LRK53_RS06150	0.71	+1.2
1,413,336	-		LRK53_RS06150	0.71	+2.6
1,413,336	-		LRK53_RS06150	0.71	+1.2
1,413,336	-		LRK53_RS06150	0.71	+0.2
1,413,336	-		LRK53_RS06150	0.71	-0.8
1,413,336	-		LRK53_RS06150	0.71	-0.4
1,413,336	-		LRK53_RS06150	0.71	+1.2
1,413,357	+		LRK53_RS06150	0.73	-0.2
1,413,357	+		LRK53_RS06150	0.73	+0.1
1,413,358	-		LRK53_RS06150	0.73	-0.4
1,413,358	-		LRK53_RS06150	0.73	+0.2
1,413,358	-		LRK53_RS06150	0.73	+0.8
1,413,402	+		LRK53_RS06150	0.79	+0.3
1,413,402	+		LRK53_RS06150	0.79	+0.6
1,413,402	+		LRK53_RS06150	0.79	-0.8
1,413,402	+		LRK53_RS06150	0.79	+1.2
1,413,402	+		LRK53_RS06150	0.79	+0.0
1,413,402	+		LRK53_RS06150	0.79	-1.2
1,413,403	-		LRK53_RS06150	0.79	+2.5
1,413,403	-		LRK53_RS06150	0.79	-0.0
1,413,403	-		LRK53_RS06150	0.79	-0.2
1,413,403	-		LRK53_RS06150	0.79	+0.2
1,413,403	-		LRK53_RS06150	0.79	+0.4
1,413,458	+		LRK53_RS06150	0.85	+0.4
1,413,459	-		LRK53_RS06150	0.85	+1.2
1,413,459	-		LRK53_RS06150	0.85	-0.2
1,413,459	-		LRK53_RS06150	0.85	-1.4
1,413,514	+				-0.6
1,413,514	+				-1.0
1,413,514	+				+0.7
1,413,515	-				-0.3
1,413,548	+				-0.2
1,413,548	+				-1.4
1,413,549	-				+0.7
1,413,549	-				-0.3
1,413,616	+				-0.1
1,413,616	+				+0.7
1,413,616	+				-0.7
1,413,616	+				-0.2
1,413,616	+				+1.2
1,413,616	+				+0.6
1,413,616	+				-0.6
1,413,616	+				+1.2
1,413,616	+				-2.0
1,413,616	+				+0.6
1,413,616	+				-0.4
1,413,616	+				-2.4
1,413,616	+				-2.3
1,413,616	+				-1.4
1,413,616	+				+1.4
1,413,617	-				+0.3
1,413,617	-				+2.3
1,413,617	-				+0.2
1,413,617	-				-0.4
1,413,617	-				+0.5
1,413,617	-				-0.1
1,413,617	-				-1.0
1,413,617	-				+0.7
1,413,730	-		LRK53_RS06155	0.23	+1.4
1,413,792	+		LRK53_RS06155	0.40	+0.7
1,413,792	+		LRK53_RS06155	0.40	-1.8
1,413,792	+		LRK53_RS06155	0.40	-0.1
1,413,792	+		LRK53_RS06155	0.40	+1.2
1,413,792	+		LRK53_RS06155	0.40	-0.7
1,413,792	+		LRK53_RS06155	0.40	-0.4
1,413,793	-		LRK53_RS06155	0.40	-0.1
1,413,793	-		LRK53_RS06155	0.40	-1.5
1,413,793	-		LRK53_RS06155	0.40	-0.4
1,413,793	-		LRK53_RS06155	0.40	-0.7
1,413,793	-		LRK53_RS06155	0.40	+0.6
1,413,793	-		LRK53_RS06155	0.40	-0.2
1,413,793	-		LRK53_RS06155	0.40	+0.7
1,413,793	-		LRK53_RS06155	0.40	-2.2
1,413,793	-		LRK53_RS06155	0.40	-0.8
1,413,793	-		LRK53_RS06155	0.40	-2.4
1,413,793	-		LRK53_RS06155	0.40	+0.2
1,413,793	-		LRK53_RS06155	0.40	+0.6
1,413,793	-		LRK53_RS06155	0.40	-1.4
1,414,181	+		LRK53_RS06160	0.28	+1.2
1,414,181	+		LRK53_RS06160	0.28	-0.8
1,414,182	-		LRK53_RS06160	0.28	+1.5