Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS05190

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
1,218,439	-		LRK53_RS05185	0.71	-0.1
1,218,439	-		LRK53_RS05185	0.71	+0.3
1,218,439	-		LRK53_RS05185	0.71	+0.6
1,218,439	-		LRK53_RS05185	0.71	-0.3
1,218,439	-		LRK53_RS05185	0.71	-0.1
1,218,537	+		LRK53_RS05185	0.74	+0.3
1,218,537	+		LRK53_RS05185	0.74	-0.6
1,218,537	+		LRK53_RS05185	0.74	+2.3
1,218,537	+		LRK53_RS05185	0.74	+3.6
1,218,537	+		LRK53_RS05185	0.74	+1.3
1,218,537	+		LRK53_RS05185	0.74	+0.1
1,218,537	+		LRK53_RS05185	0.74	-0.1
1,218,537	+		LRK53_RS05185	0.74	-0.9
1,218,537	+		LRK53_RS05185	0.74	-0.4
1,218,537	+		LRK53_RS05185	0.74	+0.3
1,218,538	-		LRK53_RS05185	0.74	+1.0
1,218,538	-		LRK53_RS05185	0.74	+2.9
1,218,538	-		LRK53_RS05185	0.74	-2.0
1,218,538	-		LRK53_RS05185	0.74	+0.6
1,218,538	-		LRK53_RS05185	0.74	-0.7
1,218,538	-		LRK53_RS05185	0.74	+1.7
1,218,600	+		LRK53_RS05185	0.76	-0.9
1,218,600	+		LRK53_RS05185	0.76	+0.9
1,218,600	+		LRK53_RS05185	0.76	-0.3
1,218,600	+		LRK53_RS05185	0.76	-1.5
1,218,600	+		LRK53_RS05185	0.76	-0.6
1,218,600	+		LRK53_RS05185	0.76	-1.9
1,218,600	+		LRK53_RS05185	0.76	-0.5
1,218,600	+		LRK53_RS05185	0.76	+0.8
1,218,600	+		LRK53_RS05185	0.76	+2.3
1,218,600	+		LRK53_RS05185	0.76	-0.5
1,218,600	+		LRK53_RS05185	0.76	-1.0
1,218,600	+		LRK53_RS05185	0.76	-0.8
1,218,600	+		LRK53_RS05185	0.76	-0.2
1,218,600	+		LRK53_RS05185	0.76	-0.9
1,218,600	+		LRK53_RS05185	0.76	-0.3
1,218,600	+		LRK53_RS05185	0.76	+0.5
1,218,600	+		LRK53_RS05185	0.76	+2.3
1,218,600	+		LRK53_RS05185	0.76	-0.3
1,218,600	+		LRK53_RS05185	0.76	+0.1
1,218,600	+		LRK53_RS05185	0.76	+0.9
1,218,600	+		LRK53_RS05185	0.76	+0.3
1,218,601	-		LRK53_RS05185	0.76	-0.0
1,218,601	-		LRK53_RS05185	0.76	+0.3
1,218,601	-		LRK53_RS05185	0.76	+0.9
1,218,601	-		LRK53_RS05185	0.76	+0.3
1,218,601	-		LRK53_RS05185	0.76	-1.6
1,218,601	-		LRK53_RS05185	0.76	+0.3
1,218,601	-		LRK53_RS05185	0.76	+0.1
1,218,601	-		LRK53_RS05185	0.76	-0.7
1,218,601	-		LRK53_RS05185	0.76	-0.0
1,218,601	-		LRK53_RS05185	0.76	-0.0
1,218,601	-		LRK53_RS05185	0.76	-0.3
1,218,601	-		LRK53_RS05185	0.76	-0.3
1,218,601	-		LRK53_RS05185	0.76	-0.3
1,218,685	+		LRK53_RS05185	0.78	-0.3
1,218,686	-		LRK53_RS05185	0.78	-0.3
1,218,686	-		LRK53_RS05185	0.78	-2.4
1,218,783	+		LRK53_RS05185	0.81	+1.3
1,218,783	+		LRK53_RS05185	0.81	+0.2
1,218,783	+		LRK53_RS05185	0.81	+0.5
1,218,784	-		LRK53_RS05185	0.81	-0.5
1,218,784	-		LRK53_RS05185	0.81	-0.1
1,218,784	-		LRK53_RS05185	0.81	-0.5
1,218,784	-		LRK53_RS05185	0.81	+0.7
1,218,784	-		LRK53_RS05185	0.81	-1.3
1,218,784	-		LRK53_RS05185	0.81	-0.0
1,218,784	-		LRK53_RS05185	0.81	+0.5
1,218,784	-		LRK53_RS05185	0.81	-2.5
1,218,784	-		LRK53_RS05185	0.81	-0.3
1,218,784	-		LRK53_RS05185	0.81	-1.0
1,218,784	-		LRK53_RS05185	0.81	-0.1
1,218,828	+		LRK53_RS05185	0.83	+0.1
1,218,828	+		LRK53_RS05185	0.83	-2.0
1,218,828	+		LRK53_RS05185	0.83	-0.5
1,218,828	+		LRK53_RS05185	0.83	-1.3
1,218,828	+		LRK53_RS05185	0.83	-0.4
1,218,828	+		LRK53_RS05185	0.83	-1.3
1,218,828	+		LRK53_RS05185	0.83	-0.7
1,218,828	+		LRK53_RS05185	0.83	-0.7
1,218,828	+		LRK53_RS05185	0.83	-1.1
1,218,828	+		LRK53_RS05185	0.83	+2.6
1,218,828	+		LRK53_RS05185	0.83	-0.9
1,218,828	+		LRK53_RS05185	0.83	-0.6
1,218,828	+		LRK53_RS05185	0.83	+0.6
1,218,829	-		LRK53_RS05185	0.83	-0.1
1,218,829	-		LRK53_RS05185	0.83	-2.3
1,218,829	-		LRK53_RS05185	0.83	-0.5
1,218,829	-		LRK53_RS05185	0.83	-0.0
1,218,829	-		LRK53_RS05185	0.83	-0.7
1,218,829	-		LRK53_RS05185	0.83	+0.7
1,218,829	-		LRK53_RS05185	0.83	+0.7
1,218,829	-		LRK53_RS05185	0.83	+1.3
1,218,829	-		LRK53_RS05185	0.83	+1.3
1,218,829	-		LRK53_RS05185	0.83	+1.1
1,218,829	-		LRK53_RS05185	0.83	+0.6
1,218,829	-		LRK53_RS05185	0.83	+1.3
1,218,854	-		LRK53_RS05185	0.83	-0.4
1,218,991	+		LRK53_RS05185	0.87	-0.7
1,219,039	-		LRK53_RS05185	0.89	-0.3
1,219,140	+				+1.3
1,219,141	-				-0.4
1,219,141	-				-0.3
1,219,299	+				-2.6
1,219,299	+				+0.9
1,219,299	+				+2.9
1,219,299	+				-0.7
1,219,299	+				+0.6
1,219,300	-				-0.9
1,219,300	-				+0.3
1,219,300	-				-1.5
1,219,300	-				+0.1
1,219,300	-				+0.7
1,219,300	-				+0.1
1,219,437	+				-0.3
1,219,437	+				-0.3
1,219,437	+				-0.3
1,219,437	+				+0.5
1,219,437	+				+0.4
1,219,438	-				-0.6
1,219,438	-				+1.7
1,219,438	-				-1.3
1,219,438	-				-0.3
1,219,438	-				-3.1
1,219,438	-				-0.0
1,219,441	-				-1.5
1,219,587	-		LRK53_RS05190	0.27	-0.7
1,219,851	+		LRK53_RS05190	0.74	-1.2
1,219,852	-		LRK53_RS05190	0.74	+1.3
1,220,060	+				-1.9
1,220,061	-				+1.3
1,220,061	-				-0.7
1,220,061	-				-0.5
1,220,105	+		LRK53_RS05195	0.11	+0.6
1,220,105	+		LRK53_RS05195	0.11	+1.3
1,220,105	+		LRK53_RS05195	0.11	+0.6
1,220,105	+		LRK53_RS05195	0.11	+0.1
1,220,106	-		LRK53_RS05195	0.11	+0.8
1,220,106	-		LRK53_RS05195	0.11	+0.3
1,220,167	+		LRK53_RS05195	0.16	+0.7
1,220,167	+		LRK53_RS05195	0.16	-0.0
1,220,285	+		LRK53_RS05195	0.28	-0.2
1,220,285	+		LRK53_RS05195	0.28	-0.7
1,220,285	+		LRK53_RS05195	0.28	-0.2
1,220,285	+		LRK53_RS05195	0.28	+0.8
1,220,285	+		LRK53_RS05195	0.28	+0.8
1,220,286	-		LRK53_RS05195	0.28	+0.7
1,220,286	-		LRK53_RS05195	0.28	+2.3
1,220,286	-		LRK53_RS05195	0.28	-1.5
1,220,324	+		LRK53_RS05195	0.31	-1.5
1,220,324	+		LRK53_RS05195	0.31	+0.8
1,220,324	+		LRK53_RS05195	0.31	-2.0
1,220,324	+		LRK53_RS05195	0.31	-0.2
1,220,324	+		LRK53_RS05195	0.31	+2.9
1,220,324	+		LRK53_RS05195	0.31	+0.6
1,220,324	+		LRK53_RS05195	0.31	+0.3
1,220,324	+		LRK53_RS05195	0.31	+0.0
1,220,324	+		LRK53_RS05195	0.31	-1.5
1,220,324	+		LRK53_RS05195	0.31	+0.5
1,220,324	+		LRK53_RS05195	0.31	+0.1
1,220,324	+		LRK53_RS05195	0.31	+0.3
1,220,325	-		LRK53_RS05195	0.31	-0.8
1,220,325	-		LRK53_RS05195	0.31	-0.6
1,220,325	-		LRK53_RS05195	0.31	+0.3
1,220,325	-		LRK53_RS05195	0.31	-0.5
1,220,325	-		LRK53_RS05195	0.31	-0.9
1,220,325	-		LRK53_RS05195	0.31	+0.6
1,220,325	-		LRK53_RS05195	0.31	+0.7
1,220,325	-		LRK53_RS05195	0.31	-0.3
1,220,325	-		LRK53_RS05195	0.31	+0.1
1,220,330	+		LRK53_RS05195	0.32	-0.3
1,220,331	-		LRK53_RS05195	0.32	-0.0
1,220,331	-		LRK53_RS05195	0.32	-2.6
1,220,331	-		LRK53_RS05195	0.32	+0.7
1,220,331	-		LRK53_RS05195	0.32	+1.5
1,220,395	+		LRK53_RS05195	0.38	-1.0
1,220,395	+		LRK53_RS05195	0.38	-0.5
1,220,437	+		LRK53_RS05195	0.42	-1.1
1,220,437	+		LRK53_RS05195	0.42	+0.3
1,220,437	+		LRK53_RS05195	0.42	+0.7
1,220,437	+		LRK53_RS05195	0.42	+1.3
1,220,437	+		LRK53_RS05195	0.42	-0.9
1,220,437	+		LRK53_RS05195	0.42	-1.3
1,220,437	+		LRK53_RS05195	0.42	-0.6
1,220,438	-		LRK53_RS05195	0.42	-0.1
1,220,438	-		LRK53_RS05195	0.42	+0.3
1,220,438	-		LRK53_RS05195	0.42	-0.9
1,220,438	-		LRK53_RS05195	0.42	-1.3
1,220,438	-		LRK53_RS05195	0.42	-2.1
1,220,438	-		LRK53_RS05195	0.42	-0.3
1,220,438	-		LRK53_RS05195	0.42	+0.6
1,220,438	-		LRK53_RS05195	0.42	+0.3
1,220,438	-		LRK53_RS05195	0.42	+0.5
1,220,438	-		LRK53_RS05195	0.42	+1.3
1,220,438	-		LRK53_RS05195	0.42	+1.0
1,220,438	-		LRK53_RS05195	0.42	-0.3
1,220,438	-		LRK53_RS05195	0.42	+3.9
1,220,438	-		LRK53_RS05195	0.42	-0.3
1,220,438	-		LRK53_RS05195	0.42	-0.0
1,220,438	-		LRK53_RS05195	0.42	+1.0
1,220,438	-		LRK53_RS05195	0.42	-0.2
1,220,438	-		LRK53_RS05195	0.42	+1.3
1,220,456	+		LRK53_RS05195	0.44	+1.3
1,220,456	+		LRK53_RS05195	0.44	+0.7
1,220,456	+		LRK53_RS05195	0.44	+0.5
1,220,456	+		LRK53_RS05195	0.44	+1.6
1,220,456	+		LRK53_RS05195	0.44	+0.3
1,220,456	+		LRK53_RS05195	0.44	-2.2
1,220,456	+		LRK53_RS05195	0.44	+1.6
1,220,457	-		LRK53_RS05195	0.44	+0.8
1,220,457	-		LRK53_RS05195	0.44	-1.8
1,220,457	-		LRK53_RS05195	0.44	+0.3
1,220,457	-		LRK53_RS05195	0.44	+0.3
1,220,457	-		LRK53_RS05195	0.44	+0.7
1,220,457	-		LRK53_RS05195	0.44	+1.3
1,220,457	-		LRK53_RS05195	0.44	-0.1
1,220,457	-		LRK53_RS05195	0.44	-0.4
1,220,457	-		LRK53_RS05195	0.44	-0.4
1,220,457	-		LRK53_RS05195	0.44	+0.3
1,220,457	-		LRK53_RS05195	0.44	-0.3
1,220,459	+		LRK53_RS05195	0.44	+0.2
1,220,459	+		LRK53_RS05195	0.44	-1.9
1,220,459	+		LRK53_RS05195	0.44	-1.0
1,220,460	-		LRK53_RS05195	0.44	-0.3
1,220,460	-		LRK53_RS05195	0.44	+1.7
1,220,460	-		LRK53_RS05195	0.44	-1.5
1,220,460	-		LRK53_RS05195	0.44	-0.5
1,220,474	+		LRK53_RS05195	0.46	-0.4
1,220,474	+		LRK53_RS05195	0.46	+2.3
1,220,474	+		LRK53_RS05195	0.46	-0.1
1,220,474	+		LRK53_RS05195	0.46	+1.3
1,220,474	+		LRK53_RS05195	0.46	-1.0
1,220,474	+		LRK53_RS05195	0.46	+0.6
1,220,475	-		LRK53_RS05195	0.46	+0.1
1,220,475	-		LRK53_RS05195	0.46	-0.4
1,220,475	-		LRK53_RS05195	0.46	+1.3
1,220,475	-		LRK53_RS05195	0.46	-1.2
1,220,475	-		LRK53_RS05195	0.46	-1.3
1,220,567	+		LRK53_RS05195	0.54	+2.9
1,220,567	+		LRK53_RS05195	0.54	+0.3
1,220,568	-		LRK53_RS05195	0.54	+0.7
1,220,568	-		LRK53_RS05195	0.54	-0.9
1,220,612	+		LRK53_RS05195	0.59	-1.0
1,220,612	+		LRK53_RS05195	0.59	+0.3
1,220,612	+		LRK53_RS05195	0.59	+1.3
1,220,612	+		LRK53_RS05195	0.59	+0.1
1,220,612	+		LRK53_RS05195	0.59	-0.8
1,220,612	+		LRK53_RS05195	0.59	+0.4
1,220,613	-		LRK53_RS05195	0.59	-0.2
1,220,613	-		LRK53_RS05195	0.59	-0.3
1,220,613	-		LRK53_RS05195	0.59	-2.3
1,220,613	-		LRK53_RS05195	0.59	-1.0
1,220,613	-		LRK53_RS05195	0.59	-0.6
1,220,613	-		LRK53_RS05195	0.59	+1.3
1,220,613	-		LRK53_RS05195	0.59	-1.6
1,220,615	+		LRK53_RS05195	0.59	+1.0
1,220,615	+		LRK53_RS05195	0.59	-2.0
1,220,615	+		LRK53_RS05195	0.59	+1.3
1,220,616	-		LRK53_RS05195	0.59	+1.3
1,220,616	-		LRK53_RS05195	0.59	+2.3
1,220,616	-		LRK53_RS05195	0.59	-0.7
1,220,616	-		LRK53_RS05195	0.59	-1.7
1,220,616	-		LRK53_RS05195	0.59	-0.3
1,220,657	+		LRK53_RS05195	0.63	-1.0
1,220,657	+		LRK53_RS05195	0.63	-0.1
1,220,657	+		LRK53_RS05195	0.63	+1.2
1,220,657	+		LRK53_RS05195	0.63	+0.3
1,220,657	+		LRK53_RS05195	0.63	-0.3
1,220,657	+		LRK53_RS05195	0.63	-0.9
1,220,657	+		LRK53_RS05195	0.63	-0.1
1,220,657	+		LRK53_RS05195	0.63	+0.5
1,220,657	+		LRK53_RS05195	0.63	-0.3
1,220,657	+		LRK53_RS05195	0.63	+0.3
1,220,657	+		LRK53_RS05195	0.63	+0.1
1,220,658	-		LRK53_RS05195	0.63	+1.3
1,220,658	-		LRK53_RS05195	0.63	+0.3
1,220,658	-		LRK53_RS05195	0.63	-0.4
1,220,658	-		LRK53_RS05195	0.63	+0.1
1,220,658	-		LRK53_RS05195	0.63	-1.5
1,220,658	-		LRK53_RS05195	0.63	+0.8
1,220,748	-		LRK53_RS05195	0.71	-0.3
1,220,831	+		LRK53_RS05195	0.79	-0.2
1,220,831	+		LRK53_RS05195	0.79	-2.4
1,220,832	-		LRK53_RS05195	0.79	+2.1
1,220,832	-		LRK53_RS05195	0.79	+0.9
1,220,832	-		LRK53_RS05195	0.79	-1.7
1,220,841	+		LRK53_RS05195	0.80	-0.1
1,220,841	+		LRK53_RS05195	0.80	+2.3
1,220,841	+		LRK53_RS05195	0.80	+0.8
1,220,841	+		LRK53_RS05195	0.80	-1.0
1,220,841	+		LRK53_RS05195	0.80	+0.9
1,220,841	+		LRK53_RS05195	0.80	-1.3
1,220,841	+		LRK53_RS05195	0.80	+1.0
1,220,842	-		LRK53_RS05195	0.80	-1.7
1,220,842	-		LRK53_RS05195	0.80	+0.5
1,220,842	-		LRK53_RS05195	0.80	+3.3
1,220,842	-		LRK53_RS05195	0.80	+1.3
1,220,842	-		LRK53_RS05195	0.80	-1.1
1,220,867	+		LRK53_RS05195	0.83	-0.6
1,220,868	-		LRK53_RS05195	0.83	-2.2
1,220,868	-		LRK53_RS05195	0.83	+0.6
1,220,978	+				-0.6
1,220,978	+				-1.7
1,220,978	+				-1.2
1,220,978	+				+0.1
1,220,978	+				-0.3
1,220,978	+				-0.9
1,220,978	+				+0.3
1,220,978	+				-0.3
1,220,978	+				-0.7
1,220,978	+				-0.7
1,220,978	+				-1.3
1,220,979	-				+0.3
1,220,979	-				-1.9
1,220,979	-				-0.1
1,220,979	-				+0.9
1,220,979	-				-0.4
1,220,979	-				-0.0
1,220,979	-				-0.4
1,220,979	-				-0.3
1,220,979	-				+0.8
1,220,979	-				+0.7
1,220,979	-				+0.5
1,220,979	-				+0.1
1,220,979	-				-0.4
1,220,979	-				-1.7
1,220,979	-				-1.5
1,220,979	-				-1.5