Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS04945

Experiment: NLDM_defined; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined; midlog
1,157,400	-		LRK53_RS04940	0.64	-1.0
1,157,423	+		LRK53_RS04940	0.66	+0.2
1,157,423	+		LRK53_RS04940	0.66	-2.2
1,157,423	+		LRK53_RS04940	0.66	-0.4
1,157,423	+		LRK53_RS04940	0.66	-0.7
1,157,424	-		LRK53_RS04940	0.66	-0.4
1,157,424	-		LRK53_RS04940	0.66	+1.2
1,157,474	+		LRK53_RS04940	0.68	+2.2
1,157,474	+		LRK53_RS04940	0.68	-0.2
1,157,474	+		LRK53_RS04940	0.68	+0.4
1,157,475	-		LRK53_RS04940	0.68	-1.0
1,157,475	-		LRK53_RS04940	0.68	+0.6
1,157,475	-		LRK53_RS04940	0.68	+0.2
1,157,475	-		LRK53_RS04940	0.68	+0.2
1,157,475	-		LRK53_RS04940	0.68	-0.5
1,157,492	+		LRK53_RS04940	0.69	+0.2
1,157,573	+		LRK53_RS04940	0.73	+0.8
1,157,573	+		LRK53_RS04940	0.73	-0.5
1,157,573	+		LRK53_RS04940	0.73	-0.7
1,157,573	+		LRK53_RS04940	0.73	+0.2
1,157,573	+		LRK53_RS04940	0.73	-1.7
1,157,573	+		LRK53_RS04940	0.73	-0.4
1,157,573	+		LRK53_RS04940	0.73	+1.4
1,157,573	+		LRK53_RS04940	0.73	-0.1
1,157,574	-		LRK53_RS04940	0.73	-1.3
1,157,574	-		LRK53_RS04940	0.73	-2.3
1,157,574	-		LRK53_RS04940	0.73	-0.7
1,157,574	-		LRK53_RS04940	0.73	-0.3
1,157,574	-		LRK53_RS04940	0.73	-1.0
1,157,574	-		LRK53_RS04940	0.73	-1.1
1,157,840	+		LRK53_RS04940	0.87	+1.2
1,157,840	+		LRK53_RS04940	0.87	-1.4
1,157,840	+		LRK53_RS04940	0.87	-0.8
1,157,841	-		LRK53_RS04940	0.87	-1.0
1,157,841	-		LRK53_RS04940	0.87	-0.5
1,157,903	+		LRK53_RS04940	0.90	+0.2
1,157,903	+		LRK53_RS04940	0.90	+0.5
1,157,903	+		LRK53_RS04940	0.90	-1.7
1,157,903	+		LRK53_RS04940	0.90	+0.4
1,157,904	-		LRK53_RS04940	0.90	+0.4
1,157,904	-		LRK53_RS04940	0.90	+0.8
1,157,904	-		LRK53_RS04940	0.90	-0.4
1,157,904	-		LRK53_RS04940	0.90	-0.2
1,157,904	-		LRK53_RS04940	0.90	-1.8
1,157,904	-		LRK53_RS04940	0.90	-1.7
1,157,904	-		LRK53_RS04940	0.90	-2.8
1,157,958	-				-0.7
1,157,978	+				-2.2
1,157,979	-				-1.2
1,157,984	+				-0.5
1,158,190	+				-1.5
1,158,191	-				-1.7
1,158,298	+		LRK53_RS04945	0.14	-0.8
1,158,299	-		LRK53_RS04945	0.14	+0.3
1,158,299	-		LRK53_RS04945	0.14	+0.7
1,158,317	-		LRK53_RS04945	0.15	+0.1
1,158,328	+		LRK53_RS04945	0.16	-0.4
1,158,329	-		LRK53_RS04945	0.16	+2.7
1,158,397	+		LRK53_RS04945	0.22	-2.2
1,158,397	+		LRK53_RS04945	0.22	-1.2
1,158,397	+		LRK53_RS04945	0.22	-0.1
1,158,397	+		LRK53_RS04945	0.22	-0.9
1,158,397	+		LRK53_RS04945	0.22	-1.2
1,158,397	+		LRK53_RS04945	0.22	+0.3
1,158,397	+		LRK53_RS04945	0.22	-0.4
1,158,397	+		LRK53_RS04945	0.22	+0.3
1,158,397	+		LRK53_RS04945	0.22	+0.6
1,158,397	+		LRK53_RS04945	0.22	-0.9
1,158,397	+		LRK53_RS04945	0.22	+1.2
1,158,397	+		LRK53_RS04945	0.22	-0.8
1,158,397	+		LRK53_RS04945	0.22	-0.7
1,158,397	+		LRK53_RS04945	0.22	+0.4
1,158,397	+		LRK53_RS04945	0.22	-0.2
1,158,397	+		LRK53_RS04945	0.22	+0.2
1,158,397	+		LRK53_RS04945	0.22	-0.3
1,158,397	+		LRK53_RS04945	0.22	-0.4
1,158,397	+		LRK53_RS04945	0.22	-0.1
1,158,397	+		LRK53_RS04945	0.22	+0.3
1,158,398	-		LRK53_RS04945	0.22	-1.0
1,158,398	-		LRK53_RS04945	0.22	+1.4
1,158,398	-		LRK53_RS04945	0.22	+0.2
1,158,398	-		LRK53_RS04945	0.22	+1.7
1,158,398	-		LRK53_RS04945	0.22	-2.3
1,158,398	-		LRK53_RS04945	0.22	-2.0
1,158,398	-		LRK53_RS04945	0.22	+0.8
1,158,398	-		LRK53_RS04945	0.22	-0.4
1,158,398	-		LRK53_RS04945	0.22	+1.2
1,158,398	-		LRK53_RS04945	0.22	+1.5
1,158,398	-		LRK53_RS04945	0.22	+0.8
1,158,398	-		LRK53_RS04945	0.22	-1.4
1,158,398	-		LRK53_RS04945	0.22	+1.2
1,158,398	-		LRK53_RS04945	0.22	+0.9
1,158,643	+		LRK53_RS04945	0.42	-1.5
1,158,644	-		LRK53_RS04945	0.42	-0.8
1,158,644	-		LRK53_RS04945	0.42	+1.2
1,158,673	+		LRK53_RS04945	0.44	-0.9
1,158,673	+		LRK53_RS04945	0.44	+0.2
1,158,674	-		LRK53_RS04945	0.44	+0.3
1,158,674	-		LRK53_RS04945	0.44	-0.7
1,158,674	-		LRK53_RS04945	0.44	-2.0
1,158,674	-		LRK53_RS04945	0.44	-0.4
1,158,739	+		LRK53_RS04945	0.50	+1.2
1,158,739	+		LRK53_RS04945	0.50	+1.0
1,158,739	+		LRK53_RS04945	0.50	+0.7
1,158,739	+		LRK53_RS04945	0.50	-0.8
1,158,739	+		LRK53_RS04945	0.50	-0.4
1,158,740	-		LRK53_RS04945	0.50	-0.4
1,158,740	-		LRK53_RS04945	0.50	-1.2
1,158,740	-		LRK53_RS04945	0.50	-0.5
1,158,740	-		LRK53_RS04945	0.50	+0.8
1,158,868	+		LRK53_RS04945	0.60	+0.0
1,158,869	-		LRK53_RS04945	0.60	+0.7
1,158,892	+		LRK53_RS04945	0.62	-1.2
1,158,892	+		LRK53_RS04945	0.62	+0.7
1,158,893	-		LRK53_RS04945	0.62	-0.5
1,158,893	-		LRK53_RS04945	0.62	-0.8
1,158,970	+		LRK53_RS04945	0.69	+1.2
1,158,997	+		LRK53_RS04945	0.71	-0.2
1,158,997	+		LRK53_RS04945	0.71	+0.0
1,158,998	-		LRK53_RS04945	0.71	+0.6
1,158,998	-		LRK53_RS04945	0.71	+0.7
1,158,998	-		LRK53_RS04945	0.71	+0.2
1,159,060	+		LRK53_RS04945	0.76	-0.1
1,159,060	+		LRK53_RS04945	0.76	-0.4
1,159,061	-		LRK53_RS04945	0.76	+0.6
1,159,061	-		LRK53_RS04945	0.76	+0.1
1,159,061	-		LRK53_RS04945	0.76	+0.2
1,159,061	-		LRK53_RS04945	0.76	+0.2
1,159,061	-		LRK53_RS04945	0.76	-0.4
1,159,087	+		LRK53_RS04945	0.78	+0.9
1,159,117	+		LRK53_RS04945	0.81	-0.6
1,159,117	+		LRK53_RS04945	0.81	+0.6
1,159,117	+		LRK53_RS04945	0.81	-0.8
1,159,117	+		LRK53_RS04945	0.81	-1.3
1,159,117	+		LRK53_RS04945	0.81	-1.3
1,159,118	-		LRK53_RS04945	0.81	+0.2
1,159,118	-		LRK53_RS04945	0.81	-0.8
1,159,168	+		LRK53_RS04945	0.85	+1.2
1,159,169	-		LRK53_RS04945	0.85	-1.2
1,159,169	-		LRK53_RS04945	0.85	+0.2
1,159,219	+		LRK53_RS04945	0.89	-0.0
1,159,220	-		LRK53_RS04945	0.89	+0.1
1,159,243	+				-0.7
1,159,244	-				-0.4
1,159,244	-				-0.9
1,159,285	+				+0.5
1,159,285	+				-1.1
1,159,285	+				+0.6
1,159,286	-				-1.9
1,159,286	-				+1.2
1,159,286	-				+0.2
1,159,286	-				+0.6
1,159,286	-				-0.4
1,159,597	-		LRK53_RS04950	0.25	+0.3
1,159,785	-		LRK53_RS04950	0.44	-0.2
1,159,785	-		LRK53_RS04950	0.44	-0.9
1,160,014	-		LRK53_RS04950	0.67	-1.2