Experiment: NLDM_defined low phosphorus; midlog
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LRK53_RS11545 and LRK53_RS11550 are separated by 5 nucleotides LRK53_RS11550 and LRK53_RS11555 are separated by 76 nucleotides
LRK53_RS11545: LRK53_RS11545 - hypothetical protein, at 2,567,901 to 2,568,731
_RS11545
LRK53_RS11550: LRK53_RS11550 - DUF4785 family protein, at 2,568,737 to 2,569,990
_RS11550
LRK53_RS11555: LRK53_RS11555 - EF-P lysine aminoacylase EpmA, at 2,570,067 to 2,571,023
_RS11555
Position (kb)
2568
2569
2570 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2567.893 kb on + strand at 2567.893 kb on + strand at 2567.894 kb on - strand at 2567.894 kb on - strand at 2567.983 kb on - strand at 2567.991 kb on + strand, within LRK53_RS11545 at 2567.992 kb on - strand, within LRK53_RS11545 at 2568.078 kb on + strand, within LRK53_RS11545 at 2568.078 kb on + strand, within LRK53_RS11545 at 2568.078 kb on + strand, within LRK53_RS11545 at 2568.078 kb on + strand, within LRK53_RS11545 at 2568.078 kb on + strand, within LRK53_RS11545 at 2568.078 kb on + strand, within LRK53_RS11545 at 2568.078 kb on + strand, within LRK53_RS11545 at 2568.078 kb on + strand, within LRK53_RS11545 at 2568.078 kb on + strand, within LRK53_RS11545 at 2568.078 kb on + strand, within LRK53_RS11545 at 2568.078 kb on + strand, within LRK53_RS11545 at 2568.078 kb on + strand, within LRK53_RS11545 at 2568.078 kb on + strand, within LRK53_RS11545 at 2568.078 kb on + strand, within LRK53_RS11545 at 2568.078 kb on + strand, within LRK53_RS11545 at 2568.078 kb on + strand, within LRK53_RS11545 at 2568.078 kb on + strand, within LRK53_RS11545 at 2568.078 kb on + strand, within LRK53_RS11545 at 2568.078 kb on + strand, within LRK53_RS11545 at 2568.078 kb on + strand, within LRK53_RS11545 at 2568.079 kb on - strand, within LRK53_RS11545 at 2568.079 kb on - strand, within LRK53_RS11545 at 2568.079 kb on - strand, within LRK53_RS11545 at 2568.079 kb on - strand, within LRK53_RS11545 at 2568.079 kb on - strand, within LRK53_RS11545 at 2568.079 kb on - strand, within LRK53_RS11545 at 2568.079 kb on - strand, within LRK53_RS11545 at 2568.079 kb on - strand, within LRK53_RS11545 at 2568.079 kb on - strand, within LRK53_RS11545 at 2568.079 kb on - strand, within LRK53_RS11545 at 2568.079 kb on - strand, within LRK53_RS11545 at 2568.079 kb on - strand, within LRK53_RS11545 at 2568.079 kb on - strand, within LRK53_RS11545 at 2568.079 kb on - strand, within LRK53_RS11545 at 2568.079 kb on - strand, within LRK53_RS11545 at 2568.079 kb on - strand, within LRK53_RS11545 at 2568.357 kb on + strand, within LRK53_RS11545 at 2568.405 kb on + strand, within LRK53_RS11545 at 2568.405 kb on + strand, within LRK53_RS11545 at 2568.405 kb on + strand, within LRK53_RS11545 at 2568.406 kb on - strand, within LRK53_RS11545 at 2568.406 kb on - strand, within LRK53_RS11545 at 2568.417 kb on + strand, within LRK53_RS11545 at 2568.417 kb on + strand, within LRK53_RS11545 at 2568.417 kb on + strand, within LRK53_RS11545 at 2568.417 kb on + strand, within LRK53_RS11545 at 2568.417 kb on + strand, within LRK53_RS11545 at 2568.417 kb on + strand, within LRK53_RS11545 at 2568.417 kb on + strand, within LRK53_RS11545 at 2568.417 kb on + strand, within LRK53_RS11545 at 2568.417 kb on + strand, within LRK53_RS11545 at 2568.417 kb on + strand, within LRK53_RS11545 at 2568.417 kb on + strand, within LRK53_RS11545 at 2568.417 kb on + strand, within LRK53_RS11545 at 2568.417 kb on + strand, within LRK53_RS11545 at 2568.417 kb on + strand, within LRK53_RS11545 at 2568.417 kb on + strand, within LRK53_RS11545 at 2568.418 kb on - strand, within LRK53_RS11545 at 2568.418 kb on - strand, within LRK53_RS11545 at 2568.418 kb on - strand, within LRK53_RS11545 at 2568.418 kb on - strand, within LRK53_RS11545 at 2568.418 kb on - strand, within LRK53_RS11545 at 2568.418 kb on - strand, within LRK53_RS11545 at 2568.418 kb on - strand, within LRK53_RS11545 at 2568.418 kb on - strand, within LRK53_RS11545 at 2568.418 kb on - strand, within LRK53_RS11545 at 2568.418 kb on - strand, within LRK53_RS11545 at 2568.470 kb on - strand, within LRK53_RS11545 at 2568.513 kb on + strand, within LRK53_RS11545 at 2568.513 kb on + strand, within LRK53_RS11545 at 2568.513 kb on + strand, within LRK53_RS11545 at 2568.514 kb on - strand, within LRK53_RS11545 at 2568.514 kb on - strand, within LRK53_RS11545 at 2568.514 kb on - strand, within LRK53_RS11545 at 2568.514 kb on - strand, within LRK53_RS11545 at 2568.514 kb on - strand, within LRK53_RS11545 at 2568.525 kb on + strand, within LRK53_RS11545 at 2568.526 kb on - strand, within LRK53_RS11545 at 2569.007 kb on + strand, within LRK53_RS11550 at 2569.008 kb on - strand, within LRK53_RS11550 at 2569.008 kb on - strand, within LRK53_RS11550 at 2569.168 kb on + strand, within LRK53_RS11550 at 2569.169 kb on - strand, within LRK53_RS11550 at 2569.169 kb on - strand, within LRK53_RS11550 at 2569.310 kb on + strand, within LRK53_RS11550 at 2569.311 kb on - strand, within LRK53_RS11550 at 2569.325 kb on + strand, within LRK53_RS11550 at 2569.325 kb on + strand, within LRK53_RS11550 at 2569.325 kb on + strand, within LRK53_RS11550 at 2569.325 kb on + strand, within LRK53_RS11550 at 2569.325 kb on + strand, within LRK53_RS11550 at 2569.325 kb on + strand, within LRK53_RS11550 at 2569.325 kb on + strand, within LRK53_RS11550 at 2569.325 kb on + strand, within LRK53_RS11550 at 2569.575 kb on + strand, within LRK53_RS11550 at 2569.575 kb on + strand, within LRK53_RS11550 at 2569.575 kb on + strand, within LRK53_RS11550 at 2569.575 kb on + strand, within LRK53_RS11550 at 2569.575 kb on + strand, within LRK53_RS11550 at 2569.575 kb on + strand, within LRK53_RS11550 at 2569.575 kb on + strand, within LRK53_RS11550 at 2569.575 kb on + strand, within LRK53_RS11550 at 2569.575 kb on + strand, within LRK53_RS11550 at 2569.575 kb on + strand, within LRK53_RS11550 at 2569.575 kb on + strand, within LRK53_RS11550 at 2569.575 kb on + strand, within LRK53_RS11550 at 2569.575 kb on + strand, within LRK53_RS11550 at 2569.575 kb on + strand, within LRK53_RS11550 at 2569.575 kb on + strand, within LRK53_RS11550 at 2569.575 kb on + strand, within LRK53_RS11550 at 2569.576 kb on - strand, within LRK53_RS11550 at 2569.576 kb on - strand, within LRK53_RS11550 at 2569.576 kb on - strand, within LRK53_RS11550 at 2569.576 kb on - strand, within LRK53_RS11550 at 2569.576 kb on - strand, within LRK53_RS11550 at 2569.576 kb on - strand, within LRK53_RS11550 at 2569.576 kb on - strand, within LRK53_RS11550 at 2569.576 kb on - strand, within LRK53_RS11550 at 2569.576 kb on - strand, within LRK53_RS11550 at 2569.576 kb on - strand, within LRK53_RS11550 at 2569.627 kb on + strand, within LRK53_RS11550 at 2569.773 kb on - strand, within LRK53_RS11550 at 2569.773 kb on - strand, within LRK53_RS11550 at 2569.866 kb on - strand at 2569.866 kb on - strand at 2569.866 kb on - strand at 2569.902 kb on - strand at 2569.965 kb on + strand at 2569.966 kb on - strand at 2569.988 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction NLDM_defined low phosphorus; midlog remove 2,567,893 + -0.1 2,567,893 + -1.5 2,567,894 - -1.3 2,567,894 - -1.7 2,567,983 - -1.2 2,567,991 + LRK53_RS11545 0.11 +1.3 2,567,992 - LRK53_RS11545 0.11 +3.7 2,568,078 + LRK53_RS11545 0.21 -0.7 2,568,078 + LRK53_RS11545 0.21 +1.3 2,568,078 + LRK53_RS11545 0.21 -0.1 2,568,078 + LRK53_RS11545 0.21 -0.7 2,568,078 + LRK53_RS11545 0.21 -0.4 2,568,078 + LRK53_RS11545 0.21 +0.5 2,568,078 + LRK53_RS11545 0.21 +1.2 2,568,078 + LRK53_RS11545 0.21 -0.1 2,568,078 + LRK53_RS11545 0.21 -0.4 2,568,078 + LRK53_RS11545 0.21 +0.1 2,568,078 + LRK53_RS11545 0.21 +0.5 2,568,078 + LRK53_RS11545 0.21 -1.4 2,568,078 + LRK53_RS11545 0.21 -1.7 2,568,078 + LRK53_RS11545 0.21 -1.6 2,568,078 + LRK53_RS11545 0.21 +1.7 2,568,078 + LRK53_RS11545 0.21 -1.4 2,568,078 + LRK53_RS11545 0.21 -1.0 2,568,078 + LRK53_RS11545 0.21 -2.1 2,568,078 + LRK53_RS11545 0.21 -1.7 2,568,078 + LRK53_RS11545 0.21 -0.2 2,568,079 - LRK53_RS11545 0.21 -1.4 2,568,079 - LRK53_RS11545 0.21 +1.9 2,568,079 - LRK53_RS11545 0.21 -0.4 2,568,079 - LRK53_RS11545 0.21 -0.4 2,568,079 - LRK53_RS11545 0.21 +1.7 2,568,079 - LRK53_RS11545 0.21 +2.1 2,568,079 - LRK53_RS11545 0.21 -0.1 2,568,079 - LRK53_RS11545 0.21 +0.3 2,568,079 - LRK53_RS11545 0.21 +0.1 2,568,079 - LRK53_RS11545 0.21 -1.1 2,568,079 - LRK53_RS11545 0.21 +1.3 2,568,079 - LRK53_RS11545 0.21 -0.7 2,568,079 - LRK53_RS11545 0.21 +0.2 2,568,079 - LRK53_RS11545 0.21 -1.1 2,568,079 - LRK53_RS11545 0.21 +0.7 2,568,079 - LRK53_RS11545 0.21 -0.4 2,568,357 + LRK53_RS11545 0.55 -2.2 2,568,405 + LRK53_RS11545 0.61 -0.7 2,568,405 + LRK53_RS11545 0.61 -2.2 2,568,405 + LRK53_RS11545 0.61 +0.9 2,568,406 - LRK53_RS11545 0.61 -2.8 2,568,406 - LRK53_RS11545 0.61 -0.2 2,568,417 + LRK53_RS11545 0.62 +0.3 2,568,417 + LRK53_RS11545 0.62 +0.9 2,568,417 + LRK53_RS11545 0.62 +0.3 2,568,417 + LRK53_RS11545 0.62 -0.9 2,568,417 + LRK53_RS11545 0.62 +0.6 2,568,417 + LRK53_RS11545 0.62 +2.3 2,568,417 + LRK53_RS11545 0.62 -0.9 2,568,417 + LRK53_RS11545 0.62 -1.7 2,568,417 + LRK53_RS11545 0.62 -1.9 2,568,417 + LRK53_RS11545 0.62 -1.0 2,568,417 + LRK53_RS11545 0.62 -1.4 2,568,417 + LRK53_RS11545 0.62 +0.6 2,568,417 + LRK53_RS11545 0.62 -0.6 2,568,417 + LRK53_RS11545 0.62 -0.2 2,568,417 + LRK53_RS11545 0.62 -2.2 2,568,418 - LRK53_RS11545 0.62 -1.3 2,568,418 - LRK53_RS11545 0.62 +1.7 2,568,418 - LRK53_RS11545 0.62 -0.5 2,568,418 - LRK53_RS11545 0.62 +2.1 2,568,418 - LRK53_RS11545 0.62 -1.0 2,568,418 - LRK53_RS11545 0.62 -0.6 2,568,418 - LRK53_RS11545 0.62 +1.9 2,568,418 - LRK53_RS11545 0.62 +0.4 2,568,418 - LRK53_RS11545 0.62 -0.4 2,568,418 - LRK53_RS11545 0.62 -1.0 2,568,470 - LRK53_RS11545 0.68 -1.7 2,568,513 + LRK53_RS11545 0.74 -0.3 2,568,513 + LRK53_RS11545 0.74 -0.8 2,568,513 + LRK53_RS11545 0.74 -1.2 2,568,514 - LRK53_RS11545 0.74 +0.7 2,568,514 - LRK53_RS11545 0.74 -0.6 2,568,514 - LRK53_RS11545 0.74 +1.5 2,568,514 - LRK53_RS11545 0.74 +0.9 2,568,514 - LRK53_RS11545 0.74 -0.0 2,568,525 + LRK53_RS11545 0.75 +0.9 2,568,526 - LRK53_RS11545 0.75 -0.7 2,569,007 + LRK53_RS11550 0.22 -2.8 2,569,008 - LRK53_RS11550 0.22 -0.4 2,569,008 - LRK53_RS11550 0.22 -0.9 2,569,168 + LRK53_RS11550 0.34 -2.8 2,569,169 - LRK53_RS11550 0.34 -1.3 2,569,169 - LRK53_RS11550 0.34 -0.8 2,569,310 + LRK53_RS11550 0.46 -0.7 2,569,311 - LRK53_RS11550 0.46 +0.9 2,569,325 + LRK53_RS11550 0.47 -0.3 2,569,325 + LRK53_RS11550 0.47 -0.3 2,569,325 + LRK53_RS11550 0.47 +0.0 2,569,325 + LRK53_RS11550 0.47 -0.1 2,569,325 + LRK53_RS11550 0.47 +0.5 2,569,325 + LRK53_RS11550 0.47 -0.7 2,569,325 + LRK53_RS11550 0.47 +0.9 2,569,325 + LRK53_RS11550 0.47 -1.4 2,569,575 + LRK53_RS11550 0.67 -1.2 2,569,575 + LRK53_RS11550 0.67 -2.7 2,569,575 + LRK53_RS11550 0.67 -1.1 2,569,575 + LRK53_RS11550 0.67 -0.4 2,569,575 + LRK53_RS11550 0.67 -0.7 2,569,575 + LRK53_RS11550 0.67 +2.2 2,569,575 + LRK53_RS11550 0.67 -2.1 2,569,575 + LRK53_RS11550 0.67 +0.3 2,569,575 + LRK53_RS11550 0.67 +3.7 2,569,575 + LRK53_RS11550 0.67 +1.5 2,569,575 + LRK53_RS11550 0.67 +0.9 2,569,575 + LRK53_RS11550 0.67 -0.7 2,569,575 + LRK53_RS11550 0.67 +0.2 2,569,575 + LRK53_RS11550 0.67 -1.7 2,569,575 + LRK53_RS11550 0.67 -1.7 2,569,575 + LRK53_RS11550 0.67 -1.8 2,569,576 - LRK53_RS11550 0.67 -0.5 2,569,576 - LRK53_RS11550 0.67 -0.7 2,569,576 - LRK53_RS11550 0.67 -0.4 2,569,576 - LRK53_RS11550 0.67 -0.9 2,569,576 - LRK53_RS11550 0.67 -0.7 2,569,576 - LRK53_RS11550 0.67 +0.5 2,569,576 - LRK53_RS11550 0.67 -1.0 2,569,576 - LRK53_RS11550 0.67 -0.7 2,569,576 - LRK53_RS11550 0.67 -0.1 2,569,576 - LRK53_RS11550 0.67 -1.4 2,569,627 + LRK53_RS11550 0.71 -0.1 2,569,773 - LRK53_RS11550 0.83 +0.6 2,569,773 - LRK53_RS11550 0.83 -0.7 2,569,866 - +0.9 2,569,866 - -2.1 2,569,866 - -0.4 2,569,902 - +2.2 2,569,965 + +0.2 2,569,966 - +1.3 2,569,988 + -1.2
Or see this region's nucleotide sequence