Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS04940

Experiment: NLDM_defined low phosphorus; midlog

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLDM_defined low phosphorus; midlog
1,155,179	+		LRK53_RS04935	0.87	-0.9
1,155,180	-		LRK53_RS04935	0.87	-0.5
1,155,180	-		LRK53_RS04935	0.87	+0.4
1,155,280	-		LRK53_RS04935	0.89	-0.4
1,155,280	-		LRK53_RS04935	0.89	-0.5
1,155,329	+		LRK53_RS04935	0.89	-0.7
1,155,329	+		LRK53_RS04935	0.89	+0.1
1,155,329	+		LRK53_RS04935	0.89	-0.7
1,155,329	+		LRK53_RS04935	0.89	+0.0
1,155,329	+		LRK53_RS04935	0.89	-2.1
1,155,329	+		LRK53_RS04935	0.89	+0.9
1,155,329	+		LRK53_RS04935	0.89	-1.1
1,155,329	+		LRK53_RS04935	0.89	+0.6
1,155,329	+		LRK53_RS04935	0.89	-0.2
1,155,329	+		LRK53_RS04935	0.89	+0.0
1,155,329	+		LRK53_RS04935	0.89	-1.4
1,155,330	-		LRK53_RS04935	0.90	-0.2
1,155,330	-		LRK53_RS04935	0.90	+0.9
1,155,330	-		LRK53_RS04935	0.90	-1.0
1,155,330	-		LRK53_RS04935	0.90	+0.9
1,155,447	+				+0.3
1,155,447	+				+0.3
1,155,447	+				-1.4
1,155,448	-				+0.0
1,155,448	-				+0.3
1,155,448	-				-0.1
1,155,448	-				+0.6
1,155,448	-				-0.1
1,155,448	-				-0.7
1,155,494	+				-0.3
1,155,494	+				+2.4
1,155,494	+				-1.4
1,155,494	+				+0.6
1,155,495	-				-0.9
1,155,495	-				+0.6
1,155,495	-				-0.3
1,155,495	-				-0.2
1,155,495	-				-0.9
1,155,503	+				+0.0
1,155,503	+				-0.7
1,155,503	+				-0.1
1,155,503	+				+0.3
1,155,503	+				+0.6
1,155,503	+				+0.5
1,155,503	+				-0.7
1,155,503	+				+0.9
1,155,504	-				-1.4
1,155,504	-				-0.1
1,155,504	-				+0.9
1,155,504	-				+1.3
1,155,504	-				-1.9
1,155,504	-				-0.5
1,155,504	-				+1.1
1,155,504	-				-1.4
1,155,504	-				+0.1
1,155,504	-				-1.7
1,155,504	-				-2.3
1,155,504	-				-0.7
1,155,740	+				-0.9
1,155,788	+				-0.8
1,155,788	+				-1.9
1,155,788	+				-2.1
1,155,789	-				-0.1
1,155,789	-				-0.7
1,155,793	+				-0.7
1,155,793	+				+0.7
1,155,794	-				-1.9
1,155,794	-				-0.1
1,155,794	-				+0.4
1,155,837	+				-1.7
1,155,837	+				-1.4
1,155,837	+				+0.9
1,155,837	+				-0.2
1,155,838	-				+0.4
1,155,838	-				-0.5
1,155,838	-				+2.5
1,155,838	-				-0.7
1,155,838	-				-1.4
1,155,838	-				-0.3
1,155,838	-				-0.1
1,155,838	-				-1.4
1,155,838	-				-2.0
1,155,911	+				-0.4
1,155,912	-				-2.1
1,156,009	+				+0.7
1,156,010	-				-0.1
1,156,130	+				+0.9
1,156,130	+				+1.5
1,156,131	-				-0.3
1,156,235	+				-0.2
1,156,235	+				-0.4
1,156,235	+				-0.1
1,156,235	+				-1.4
1,156,236	-				-0.4
1,156,236	-				+0.3
1,156,236	-				+0.5
1,156,298	+				-0.7
1,156,298	+				-0.9
1,156,298	+				-1.2
1,156,298	+				+0.5
1,156,298	+				+0.3
1,156,299	-				+1.1
1,156,430	+		LRK53_RS04940	0.15	-0.7
1,156,430	+		LRK53_RS04940	0.15	+0.6
1,156,431	-		LRK53_RS04940	0.15	+0.9
1,156,431	-		LRK53_RS04940	0.15	-1.4
1,156,431	-		LRK53_RS04940	0.15	-0.4
1,156,431	-		LRK53_RS04940	0.15	-0.9
1,156,431	-		LRK53_RS04940	0.15	-0.7
1,156,532	+		LRK53_RS04940	0.20	-0.1
1,156,533	-		LRK53_RS04940	0.20	+1.5
1,156,613	+		LRK53_RS04940	0.25	+0.9
1,156,613	+		LRK53_RS04940	0.25	-0.3
1,156,613	+		LRK53_RS04940	0.25	-0.7
1,156,613	+		LRK53_RS04940	0.25	+2.5
1,156,613	+		LRK53_RS04940	0.25	+0.1
1,156,614	-		LRK53_RS04940	0.25	-1.6
1,156,614	-		LRK53_RS04940	0.25	-3.0
1,156,614	-		LRK53_RS04940	0.25	-1.4
1,156,614	-		LRK53_RS04940	0.25	-1.8
1,156,614	-		LRK53_RS04940	0.25	-0.9
1,156,614	-		LRK53_RS04940	0.25	-0.4
1,156,614	-		LRK53_RS04940	0.25	+0.9
1,156,614	-		LRK53_RS04940	0.25	-0.3
1,156,631	+		LRK53_RS04940	0.25	-0.7
1,156,631	+		LRK53_RS04940	0.25	-1.3
1,156,631	+		LRK53_RS04940	0.25	-2.3
1,156,631	+		LRK53_RS04940	0.25	-0.1
1,156,631	+		LRK53_RS04940	0.25	-0.1
1,156,632	-		LRK53_RS04940	0.25	-0.2
1,156,632	-		LRK53_RS04940	0.25	-1.0
1,156,632	-		LRK53_RS04940	0.25	-0.4
1,156,733	+		LRK53_RS04940	0.31	+0.2
1,156,733	+		LRK53_RS04940	0.31	+0.9
1,156,734	-		LRK53_RS04940	0.31	-1.0
1,156,757	+		LRK53_RS04940	0.32	-1.1
1,156,758	-		LRK53_RS04940	0.32	-1.1
1,156,758	-		LRK53_RS04940	0.32	-0.7
1,156,778	+		LRK53_RS04940	0.33	-0.3
1,156,778	+		LRK53_RS04940	0.33	+1.3
1,156,778	+		LRK53_RS04940	0.33	-1.3
1,156,778	+		LRK53_RS04940	0.33	-1.9
1,156,779	-		LRK53_RS04940	0.33	+0.8
1,156,779	-		LRK53_RS04940	0.33	+0.2
1,156,779	-		LRK53_RS04940	0.33	-1.3
1,156,779	-		LRK53_RS04940	0.33	-2.7
1,156,779	-		LRK53_RS04940	0.33	-0.1
1,156,787	+		LRK53_RS04940	0.33	+0.3
1,156,946	+		LRK53_RS04940	0.41	-2.5
1,156,946	+		LRK53_RS04940	0.41	+0.0
1,156,946	+		LRK53_RS04940	0.41	-2.5
1,156,947	-		LRK53_RS04940	0.41	-1.0
1,156,947	-		LRK53_RS04940	0.41	-0.3
1,157,021	+		LRK53_RS04940	0.45	-1.1
1,157,021	+		LRK53_RS04940	0.45	-1.1
1,157,021	+		LRK53_RS04940	0.45	-0.9
1,157,021	+		LRK53_RS04940	0.45	+0.3
1,157,021	+		LRK53_RS04940	0.45	-0.7
1,157,022	-		LRK53_RS04940	0.45	-0.2
1,157,022	-		LRK53_RS04940	0.45	+0.4
1,157,022	-		LRK53_RS04940	0.45	-1.7
1,157,022	-		LRK53_RS04940	0.45	-1.6
1,157,042	+		LRK53_RS04940	0.46	-1.1
1,157,400	-		LRK53_RS04940	0.64	-1.3
1,157,423	+		LRK53_RS04940	0.66	-0.1
1,157,423	+		LRK53_RS04940	0.66	-2.4
1,157,423	+		LRK53_RS04940	0.66	+2.3
1,157,423	+		LRK53_RS04940	0.66	-2.6
1,157,424	-		LRK53_RS04940	0.66	+1.1
1,157,474	+		LRK53_RS04940	0.68	-0.1
1,157,474	+		LRK53_RS04940	0.68	-1.4
1,157,475	-		LRK53_RS04940	0.68	-0.3
1,157,475	-		LRK53_RS04940	0.68	+0.6
1,157,475	-		LRK53_RS04940	0.68	-1.2
1,157,475	-		LRK53_RS04940	0.68	-0.5
1,157,492	+		LRK53_RS04940	0.69	-1.1
1,157,573	+		LRK53_RS04940	0.73	-1.4
1,157,573	+		LRK53_RS04940	0.73	+0.2
1,157,573	+		LRK53_RS04940	0.73	-1.2
1,157,573	+		LRK53_RS04940	0.73	-0.1
1,157,573	+		LRK53_RS04940	0.73	-1.9
1,157,573	+		LRK53_RS04940	0.73	+0.7
1,157,573	+		LRK53_RS04940	0.73	+0.6
1,157,573	+		LRK53_RS04940	0.73	-0.1
1,157,574	-		LRK53_RS04940	0.73	-1.0
1,157,574	-		LRK53_RS04940	0.73	-0.6
1,157,574	-		LRK53_RS04940	0.73	-0.3
1,157,574	-		LRK53_RS04940	0.73	-0.6
1,157,574	-		LRK53_RS04940	0.73	-0.7
1,157,574	-		LRK53_RS04940	0.73	-1.0
1,157,840	+		LRK53_RS04940	0.87	-1.7
1,157,840	+		LRK53_RS04940	0.87	+0.6
1,157,841	-		LRK53_RS04940	0.87	-2.1
1,157,841	-		LRK53_RS04940	0.87	-0.3
1,157,903	+		LRK53_RS04940	0.90	-0.9
1,157,903	+		LRK53_RS04940	0.90	+0.1
1,157,903	+		LRK53_RS04940	0.90	-0.9
1,157,903	+		LRK53_RS04940	0.90	+0.9
1,157,904	-		LRK53_RS04940	0.90	+0.9
1,157,904	-		LRK53_RS04940	0.90	-0.4
1,157,904	-		LRK53_RS04940	0.90	+0.1
1,157,904	-		LRK53_RS04940	0.90	-0.9
1,157,904	-		LRK53_RS04940	0.90	-1.1
1,157,904	-		LRK53_RS04940	0.90	+0.0
1,157,904	-		LRK53_RS04940	0.90	-1.5
1,157,958	-				-0.9
1,157,978	+				-1.4
1,157,979	-				-1.4
1,157,984	+				-2.8
1,158,190	+				-0.2
1,158,191	-				+0.2
1,158,298	+		LRK53_RS04945	0.14	-2.1
1,158,299	-		LRK53_RS04945	0.14	-0.5
1,158,299	-		LRK53_RS04945	0.14	-1.1
1,158,317	-		LRK53_RS04945	0.15	-0.9
1,158,328	+		LRK53_RS04945	0.16	-0.3
1,158,329	-		LRK53_RS04945	0.16	+2.5
1,158,397	+		LRK53_RS04945	0.22	-0.4
1,158,397	+		LRK53_RS04945	0.22	-1.0
1,158,397	+		LRK53_RS04945	0.22	-0.4
1,158,397	+		LRK53_RS04945	0.22	-0.1
1,158,397	+		LRK53_RS04945	0.22	-0.5
1,158,397	+		LRK53_RS04945	0.22	-1.1
1,158,397	+		LRK53_RS04945	0.22	-0.3
1,158,397	+		LRK53_RS04945	0.22	-1.3
1,158,397	+		LRK53_RS04945	0.22	-0.7
1,158,397	+		LRK53_RS04945	0.22	+0.0
1,158,397	+		LRK53_RS04945	0.22	+1.3
1,158,397	+		LRK53_RS04945	0.22	+0.2
1,158,397	+		LRK53_RS04945	0.22	+0.6
1,158,397	+		LRK53_RS04945	0.22	-0.8
1,158,397	+		LRK53_RS04945	0.22	-0.1
1,158,397	+		LRK53_RS04945	0.22	-0.3
1,158,397	+		LRK53_RS04945	0.22	+0.3
1,158,397	+		LRK53_RS04945	0.22	+0.7
1,158,397	+		LRK53_RS04945	0.22	+0.0
1,158,398	-		LRK53_RS04945	0.22	-0.3
1,158,398	-		LRK53_RS04945	0.22	-0.4
1,158,398	-		LRK53_RS04945	0.22	+2.5
1,158,398	-		LRK53_RS04945	0.22	+0.0
1,158,398	-		LRK53_RS04945	0.22	+0.0
1,158,398	-		LRK53_RS04945	0.22	+0.9
1,158,398	-		LRK53_RS04945	0.22	-0.7
1,158,398	-		LRK53_RS04945	0.22	-1.7
1,158,398	-		LRK53_RS04945	0.22	+0.5
1,158,398	-		LRK53_RS04945	0.22	+0.4
1,158,398	-		LRK53_RS04945	0.22	+0.1
1,158,398	-		LRK53_RS04945	0.22	+1.5
1,158,398	-		LRK53_RS04945	0.22	-0.9
1,158,643	+		LRK53_RS04945	0.42	-0.2
1,158,644	-		LRK53_RS04945	0.42	-2.1
1,158,644	-		LRK53_RS04945	0.42	+1.3
1,158,673	+		LRK53_RS04945	0.44	-0.2
1,158,673	+		LRK53_RS04945	0.44	-0.7
1,158,674	-		LRK53_RS04945	0.44	+0.4
1,158,674	-		LRK53_RS04945	0.44	-1.9
1,158,674	-		LRK53_RS04945	0.44	-0.7
1,158,674	-		LRK53_RS04945	0.44	-0.8
1,158,739	+		LRK53_RS04945	0.50	-1.4
1,158,739	+		LRK53_RS04945	0.50	+0.3
1,158,739	+		LRK53_RS04945	0.50	-0.1
1,158,739	+		LRK53_RS04945	0.50	-0.6
1,158,739	+		LRK53_RS04945	0.50	-0.7
1,158,740	-		LRK53_RS04945	0.50	+0.6
1,158,740	-		LRK53_RS04945	0.50	-0.4
1,158,740	-		LRK53_RS04945	0.50	+0.1
1,158,740	-		LRK53_RS04945	0.50	+0.6
1,158,868	+		LRK53_RS04945	0.60	-1.6
1,158,869	-		LRK53_RS04945	0.60	-0.1
1,158,892	+		LRK53_RS04945	0.62	-1.4
1,158,892	+		LRK53_RS04945	0.62	-1.9
1,158,893	-		LRK53_RS04945	0.62	-0.6
1,158,893	-		LRK53_RS04945	0.62	-0.5
1,158,970	+		LRK53_RS04945	0.69	+0.6
1,158,997	+		LRK53_RS04945	0.71	-0.3
1,158,997	+		LRK53_RS04945	0.71	-0.3
1,158,998	-		LRK53_RS04945	0.71	-1.7
1,158,998	-		LRK53_RS04945	0.71	+0.4
1,158,998	-		LRK53_RS04945	0.71	-1.2
1,159,060	+		LRK53_RS04945	0.76	-0.7
1,159,060	+		LRK53_RS04945	0.76	-2.3
1,159,061	-		LRK53_RS04945	0.76	+0.5
1,159,061	-		LRK53_RS04945	0.76	+0.3
1,159,061	-		LRK53_RS04945	0.76	+0.9
1,159,061	-		LRK53_RS04945	0.76	+0.1
1,159,061	-		LRK53_RS04945	0.76	-0.3
1,159,087	+		LRK53_RS04945	0.78	+1.3