Experiment: Pullulan (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR88_RS08770 and ABZR88_RS08775 are separated by 502 nucleotides ABZR88_RS08775 and ABZR88_RS08780 are separated by 250 nucleotides
ABZR88_RS08770: ABZR88_RS08770 - sialate O-acetylesterase, at 2,199,995 to 2,201,959
_RS08770
ABZR88_RS08775: ABZR88_RS08775 - glycosyl hydrolase 115 family protein, at 2,202,462 to 2,205,026
_RS08775
ABZR88_RS08780: ABZR88_RS08780 - hybrid sensor histidine kinase/response regulator transcription factor, at 2,205,277 to 2,209,422
_RS08780
Position (kb)
2202
2203
2204
2205
2206 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2201.527 kb on + strand, within ABZR88_RS08770 at 2201.545 kb on + strand, within ABZR88_RS08770 at 2201.582 kb on - strand, within ABZR88_RS08770 at 2201.634 kb on - strand, within ABZR88_RS08770 at 2201.971 kb on + strand at 2201.981 kb on + strand at 2201.981 kb on + strand at 2202.184 kb on + strand at 2202.284 kb on + strand at 2202.284 kb on + strand at 2202.285 kb on - strand at 2202.287 kb on - strand at 2202.313 kb on + strand at 2202.328 kb on + strand at 2202.329 kb on - strand at 2202.832 kb on - strand, within ABZR88_RS08775 at 2202.960 kb on + strand, within ABZR88_RS08775 at 2202.960 kb on + strand, within ABZR88_RS08775 at 2203.002 kb on + strand, within ABZR88_RS08775 at 2203.062 kb on - strand, within ABZR88_RS08775 at 2203.130 kb on - strand, within ABZR88_RS08775 at 2203.132 kb on - strand, within ABZR88_RS08775 at 2203.173 kb on + strand, within ABZR88_RS08775 at 2203.174 kb on - strand, within ABZR88_RS08775 at 2203.442 kb on + strand, within ABZR88_RS08775 at 2203.513 kb on + strand, within ABZR88_RS08775 at 2203.749 kb on - strand, within ABZR88_RS08775 at 2203.758 kb on - strand, within ABZR88_RS08775 at 2203.792 kb on - strand, within ABZR88_RS08775 at 2203.829 kb on - strand, within ABZR88_RS08775 at 2203.982 kb on - strand, within ABZR88_RS08775 at 2204.029 kb on + strand, within ABZR88_RS08775 at 2204.058 kb on + strand, within ABZR88_RS08775 at 2204.059 kb on - strand, within ABZR88_RS08775 at 2204.179 kb on + strand, within ABZR88_RS08775 at 2204.206 kb on + strand, within ABZR88_RS08775 at 2204.208 kb on + strand, within ABZR88_RS08775 at 2204.323 kb on - strand, within ABZR88_RS08775 at 2204.379 kb on - strand, within ABZR88_RS08775 at 2204.379 kb on - strand, within ABZR88_RS08775 at 2204.453 kb on - strand, within ABZR88_RS08775 at 2204.610 kb on + strand, within ABZR88_RS08775 at 2204.624 kb on - strand, within ABZR88_RS08775 at 2204.740 kb on - strand, within ABZR88_RS08775 at 2204.740 kb on - strand, within ABZR88_RS08775 at 2204.740 kb on - strand, within ABZR88_RS08775 at 2204.847 kb on - strand at 2204.978 kb on - strand at 2205.078 kb on + strand at 2205.109 kb on + strand at 2205.429 kb on + strand at 2205.525 kb on + strand at 2205.526 kb on - strand at 2205.584 kb on - strand at 2205.584 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Pullulan (C) remove 2,201,527 + ABZR88_RS08770 0.78 -0.5 2,201,545 + ABZR88_RS08770 0.79 +0.6 2,201,582 - ABZR88_RS08770 0.81 +0.1 2,201,634 - ABZR88_RS08770 0.83 +0.4 2,201,971 + +0.1 2,201,981 + -0.4 2,201,981 + +0.2 2,202,184 + -0.6 2,202,284 + +0.9 2,202,284 + -0.2 2,202,285 - -2.9 2,202,287 - -0.6 2,202,313 + -0.3 2,202,328 + +0.1 2,202,329 - -0.6 2,202,832 - ABZR88_RS08775 0.14 -0.1 2,202,960 + ABZR88_RS08775 0.19 -0.0 2,202,960 + ABZR88_RS08775 0.19 -0.5 2,203,002 + ABZR88_RS08775 0.21 +0.0 2,203,062 - ABZR88_RS08775 0.23 +0.1 2,203,130 - ABZR88_RS08775 0.26 -0.9 2,203,132 - ABZR88_RS08775 0.26 +0.2 2,203,173 + ABZR88_RS08775 0.28 +0.0 2,203,174 - ABZR88_RS08775 0.28 -0.5 2,203,442 + ABZR88_RS08775 0.38 +0.9 2,203,513 + ABZR88_RS08775 0.41 -2.3 2,203,749 - ABZR88_RS08775 0.50 -0.2 2,203,758 - ABZR88_RS08775 0.51 -0.4 2,203,792 - ABZR88_RS08775 0.52 +1.3 2,203,829 - ABZR88_RS08775 0.53 +0.1 2,203,982 - ABZR88_RS08775 0.59 +0.5 2,204,029 + ABZR88_RS08775 0.61 +1.9 2,204,058 + ABZR88_RS08775 0.62 +0.4 2,204,059 - ABZR88_RS08775 0.62 +0.5 2,204,179 + ABZR88_RS08775 0.67 -0.8 2,204,206 + ABZR88_RS08775 0.68 +0.2 2,204,208 + ABZR88_RS08775 0.68 +0.5 2,204,323 - ABZR88_RS08775 0.73 -0.2 2,204,379 - ABZR88_RS08775 0.75 -0.1 2,204,379 - ABZR88_RS08775 0.75 +0.0 2,204,453 - ABZR88_RS08775 0.78 -0.2 2,204,610 + ABZR88_RS08775 0.84 +0.1 2,204,624 - ABZR88_RS08775 0.84 -0.2 2,204,740 - ABZR88_RS08775 0.89 -0.3 2,204,740 - ABZR88_RS08775 0.89 -0.5 2,204,740 - ABZR88_RS08775 0.89 -0.7 2,204,847 - -0.3 2,204,978 - -0.0 2,205,078 + +0.5 2,205,109 + -0.5 2,205,429 + +0.1 2,205,525 + -0.5 2,205,526 - -0.2 2,205,584 - -0.0 2,205,584 - -0.3
Or see this region's nucleotide sequence