Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS17690

Experiment: Pullulan (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS17680 and ABZR88_RS17685 overlap by 4 nucleotidesABZR88_RS17685 and ABZR88_RS17690 are separated by 46 nucleotidesABZR88_RS17690 and ABZR88_RS17695 are separated by 18 nucleotides ABZR88_RS17680: ABZR88_RS17680 - glycosyl transferase, at 4,322,549 to 4,323,547 _RS17680 ABZR88_RS17685: ABZR88_RS17685 - acyltransferase, at 4,323,544 to 4,324,125 _RS17685 ABZR88_RS17690: ABZR88_RS17690 - glycosyltransferase family A protein, at 4,324,172 to 4,325,194 _RS17690 ABZR88_RS17695: ABZR88_RS17695 - polysaccharide ABC transporter ATP-binding protein, at 4,325,213 to 4,326,535 _RS17695 Position (kb) 4324 4325 4326Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 4323.194 kb on + strand, within ABZR88_RS17680at 4323.308 kb on - strand, within ABZR88_RS17680at 4323.508 kb on - strandat 4323.512 kb on - strandat 4323.512 kb on - strandat 4323.521 kb on + strandat 4323.526 kb on + strandat 4323.771 kb on + strand, within ABZR88_RS17685at 4323.846 kb on + strand, within ABZR88_RS17685at 4323.854 kb on - strand, within ABZR88_RS17685at 4323.924 kb on - strand, within ABZR88_RS17685at 4323.928 kb on - strand, within ABZR88_RS17685at 4323.963 kb on + strand, within ABZR88_RS17685at 4323.986 kb on + strand, within ABZR88_RS17685at 4324.027 kb on - strand, within ABZR88_RS17685at 4324.261 kb on - strandat 4324.268 kb on - strandat 4324.281 kb on + strand, within ABZR88_RS17690at 4324.349 kb on + strand, within ABZR88_RS17690at 4324.349 kb on + strand, within ABZR88_RS17690at 4324.350 kb on - strand, within ABZR88_RS17690at 4324.382 kb on - strand, within ABZR88_RS17690at 4324.561 kb on + strand, within ABZR88_RS17690at 4324.574 kb on - strand, within ABZR88_RS17690at 4324.599 kb on + strand, within ABZR88_RS17690at 4324.600 kb on - strand, within ABZR88_RS17690at 4324.688 kb on - strand, within ABZR88_RS17690at 4324.688 kb on - strand, within ABZR88_RS17690at 4324.760 kb on + strand, within ABZR88_RS17690at 4324.782 kb on - strand, within ABZR88_RS17690at 4324.821 kb on + strand, within ABZR88_RS17690at 4324.866 kb on + strand, within ABZR88_RS17690at 4324.867 kb on - strand, within ABZR88_RS17690at 4324.960 kb on + strand, within ABZR88_RS17690at 4324.990 kb on + strand, within ABZR88_RS17690at 4324.993 kb on - strand, within ABZR88_RS17690at 4325.027 kb on + strand, within ABZR88_RS17690at 4325.223 kb on - strandat 4325.289 kb on + strandat 4325.504 kb on - strand, within ABZR88_RS17695at 4325.523 kb on - strand, within ABZR88_RS17695at 4325.552 kb on + strand, within ABZR88_RS17695at 4325.638 kb on + strand, within ABZR88_RS17695at 4325.713 kb on + strand, within ABZR88_RS17695at 4325.714 kb on - strand, within ABZR88_RS17695at 4325.758 kb on - strand, within ABZR88_RS17695at 4325.758 kb on - strand, within ABZR88_RS17695at 4325.780 kb on - strand, within ABZR88_RS17695at 4325.790 kb on - strand, within ABZR88_RS17695at 4325.824 kb on + strand, within ABZR88_RS17695at 4325.855 kb on - strand, within ABZR88_RS17695at 4326.015 kb on + strand, within ABZR88_RS17695at 4326.015 kb on + strand, within ABZR88_RS17695at 4326.047 kb on - strand, within ABZR88_RS17695at 4326.144 kb on - strand, within ABZR88_RS17695at 4326.145 kb on + strand, within ABZR88_RS17695at 4326.145 kb on + strand, within ABZR88_RS17695at 4326.146 kb on - strand, within ABZR88_RS17695at 4326.181 kb on + strand, within ABZR88_RS17695

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Per-strain Table

Position Strand Gene LocusTag Fraction Pullulan (C)
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4,323,194 + ABZR88_RS17680 0.65 -2.2
4,323,308 - ABZR88_RS17680 0.76 -3.3
4,323,508 - -1.0
4,323,512 - -1.5
4,323,512 - -0.1
4,323,521 + -2.8
4,323,526 + -2.8
4,323,771 + ABZR88_RS17685 0.39 +0.0
4,323,846 + ABZR88_RS17685 0.52 +1.1
4,323,854 - ABZR88_RS17685 0.53 -0.7
4,323,924 - ABZR88_RS17685 0.65 +2.1
4,323,928 - ABZR88_RS17685 0.66 -0.0
4,323,963 + ABZR88_RS17685 0.72 +0.5
4,323,986 + ABZR88_RS17685 0.76 -0.1
4,324,027 - ABZR88_RS17685 0.83 -1.9
4,324,261 - -1.2
4,324,268 - -2.4
4,324,281 + ABZR88_RS17690 0.11 -1.5
4,324,349 + ABZR88_RS17690 0.17 -3.7
4,324,349 + ABZR88_RS17690 0.17 -1.6
4,324,350 - ABZR88_RS17690 0.17 -1.6
4,324,382 - ABZR88_RS17690 0.21 -2.4
4,324,561 + ABZR88_RS17690 0.38 -1.4
4,324,574 - ABZR88_RS17690 0.39 -1.4
4,324,599 + ABZR88_RS17690 0.42 -3.2
4,324,600 - ABZR88_RS17690 0.42 -1.9
4,324,688 - ABZR88_RS17690 0.50 -2.5
4,324,688 - ABZR88_RS17690 0.50 -2.3
4,324,760 + ABZR88_RS17690 0.57 +0.1
4,324,782 - ABZR88_RS17690 0.60 -1.0
4,324,821 + ABZR88_RS17690 0.63 -2.0
4,324,866 + ABZR88_RS17690 0.68 -1.2
4,324,867 - ABZR88_RS17690 0.68 -2.1
4,324,960 + ABZR88_RS17690 0.77 -3.1
4,324,990 + ABZR88_RS17690 0.80 -1.4
4,324,993 - ABZR88_RS17690 0.80 -2.5
4,325,027 + ABZR88_RS17690 0.84 -0.7
4,325,223 - +0.1
4,325,289 + -1.9
4,325,504 - ABZR88_RS17695 0.22 -1.4
4,325,523 - ABZR88_RS17695 0.23 -2.8
4,325,552 + ABZR88_RS17695 0.26 +1.1
4,325,638 + ABZR88_RS17695 0.32 -3.0
4,325,713 + ABZR88_RS17695 0.38 +0.1
4,325,714 - ABZR88_RS17695 0.38 -2.3
4,325,758 - ABZR88_RS17695 0.41 -4.1
4,325,758 - ABZR88_RS17695 0.41 -2.5
4,325,780 - ABZR88_RS17695 0.43 -2.1
4,325,790 - ABZR88_RS17695 0.44 -0.7
4,325,824 + ABZR88_RS17695 0.46 -1.9
4,325,855 - ABZR88_RS17695 0.49 -0.2
4,326,015 + ABZR88_RS17695 0.61 -1.7
4,326,015 + ABZR88_RS17695 0.61 -3.0
4,326,047 - ABZR88_RS17695 0.63 -1.7
4,326,144 - ABZR88_RS17695 0.70 +0.1
4,326,145 + ABZR88_RS17695 0.70 -2.2
4,326,145 + ABZR88_RS17695 0.70 -2.6
4,326,146 - ABZR88_RS17695 0.71 -0.2
4,326,181 + ABZR88_RS17695 0.73 -2.0

Or see this region's nucleotide sequence