Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS10985

Experiment: Pullulan (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS10975 and ABZR88_RS10980 are separated by 55 nucleotidesABZR88_RS10980 and ABZR88_RS10985 are separated by 18 nucleotidesABZR88_RS10985 and ABZR88_RS10990 are separated by 25 nucleotidesABZR88_RS10990 and ABZR88_RS10995 are separated by 48 nucleotides ABZR88_RS10975: ABZR88_RS10975 - hypothetical protein, at 2,675,624 to 2,676,703 _RS10975 ABZR88_RS10980: ABZR88_RS10980 - PRTRC system protein C, at 2,676,759 to 2,676,974 _RS10980 ABZR88_RS10985: ABZR88_RS10985 - hypothetical protein, at 2,676,993 to 2,677,544 _RS10985 ABZR88_RS10990: ABZR88_RS10990 - hypothetical protein, at 2,677,570 to 2,677,824 _RS10990 ABZR88_RS10995: ABZR88_RS10995 - DUF932 domain-containing protein, at 2,677,873 to 2,678,616 _RS10995 Position (kb) 2676 2677 2678Strain fitness (log2 ratio) -3 -2 -1 0 1at 2676.040 kb on + strand, within ABZR88_RS10975at 2676.040 kb on + strand, within ABZR88_RS10975at 2676.207 kb on + strand, within ABZR88_RS10975at 2676.295 kb on - strand, within ABZR88_RS10975at 2676.434 kb on - strand, within ABZR88_RS10975at 2676.435 kb on + strand, within ABZR88_RS10975at 2676.436 kb on - strand, within ABZR88_RS10975at 2676.712 kb on - strandat 2676.813 kb on - strand, within ABZR88_RS10980at 2676.813 kb on - strand, within ABZR88_RS10980at 2676.814 kb on + strand, within ABZR88_RS10980at 2676.855 kb on + strand, within ABZR88_RS10980at 2676.856 kb on - strand, within ABZR88_RS10980at 2676.866 kb on - strand, within ABZR88_RS10980at 2676.918 kb on + strand, within ABZR88_RS10980at 2676.941 kb on - strand, within ABZR88_RS10980at 2676.977 kb on + strandat 2676.978 kb on - strandat 2676.999 kb on + strandat 2677.078 kb on + strand, within ABZR88_RS10985at 2677.165 kb on + strand, within ABZR88_RS10985at 2677.246 kb on - strand, within ABZR88_RS10985at 2677.568 kb on - strandat 2677.648 kb on - strand, within ABZR88_RS10990at 2677.692 kb on + strand, within ABZR88_RS10990at 2677.800 kb on + strandat 2677.886 kb on + strandat 2678.099 kb on + strand, within ABZR88_RS10995at 2678.100 kb on - strand, within ABZR88_RS10995at 2678.121 kb on + strand, within ABZR88_RS10995at 2678.239 kb on + strand, within ABZR88_RS10995at 2678.240 kb on - strand, within ABZR88_RS10995at 2678.367 kb on + strand, within ABZR88_RS10995at 2678.400 kb on + strand, within ABZR88_RS10995at 2678.400 kb on + strand, within ABZR88_RS10995at 2678.400 kb on + strand, within ABZR88_RS10995at 2678.400 kb on + strand, within ABZR88_RS10995at 2678.400 kb on + strand, within ABZR88_RS10995at 2678.405 kb on - strand, within ABZR88_RS10995

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Per-strain Table

Position Strand Gene LocusTag Fraction Pullulan (C)
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2,676,040 + ABZR88_RS10975 0.39 -0.4
2,676,040 + ABZR88_RS10975 0.39 -0.3
2,676,207 + ABZR88_RS10975 0.54 -0.6
2,676,295 - ABZR88_RS10975 0.62 +0.4
2,676,434 - ABZR88_RS10975 0.75 -0.8
2,676,435 + ABZR88_RS10975 0.75 -1.9
2,676,436 - ABZR88_RS10975 0.75 -0.1
2,676,712 - -1.4
2,676,813 - ABZR88_RS10980 0.25 +0.8
2,676,813 - ABZR88_RS10980 0.25 -0.6
2,676,814 + ABZR88_RS10980 0.25 -0.3
2,676,855 + ABZR88_RS10980 0.44 +0.1
2,676,856 - ABZR88_RS10980 0.45 +0.5
2,676,866 - ABZR88_RS10980 0.50 -0.5
2,676,918 + ABZR88_RS10980 0.74 -0.5
2,676,941 - ABZR88_RS10980 0.84 -0.9
2,676,977 + +0.7
2,676,978 - -0.6
2,676,999 + -0.7
2,677,078 + ABZR88_RS10985 0.15 -0.7
2,677,165 + ABZR88_RS10985 0.31 -3.0
2,677,246 - ABZR88_RS10985 0.46 -0.1
2,677,568 - -1.2
2,677,648 - ABZR88_RS10990 0.31 -0.0
2,677,692 + ABZR88_RS10990 0.48 -1.2
2,677,800 + -1.9
2,677,886 + -0.4
2,678,099 + ABZR88_RS10995 0.30 +0.4
2,678,100 - ABZR88_RS10995 0.31 -0.5
2,678,121 + ABZR88_RS10995 0.33 +0.3
2,678,239 + ABZR88_RS10995 0.49 +0.2
2,678,240 - ABZR88_RS10995 0.49 -0.1
2,678,367 + ABZR88_RS10995 0.66 -0.1
2,678,400 + ABZR88_RS10995 0.71 -0.5
2,678,400 + ABZR88_RS10995 0.71 -0.1
2,678,400 + ABZR88_RS10995 0.71 +0.3
2,678,400 + ABZR88_RS10995 0.71 +0.2
2,678,400 + ABZR88_RS10995 0.71 -0.8
2,678,405 - ABZR88_RS10995 0.72 -0.6

Or see this region's nucleotide sequence