Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS08720

Experiment: Pullulan (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS08715 and ABZR88_RS08720 are separated by 35 nucleotidesABZR88_RS08720 and ABZR88_RS08725 are separated by 21 nucleotides ABZR88_RS08715: ABZR88_RS08715 - sulfatase, at 2,181,735 to 2,183,195 _RS08715 ABZR88_RS08720: ABZR88_RS08720 - carbohydrate-binding family 9-like protein, at 2,183,231 to 2,183,905 _RS08720 ABZR88_RS08725: ABZR88_RS08725 - polysaccharide lyase family 8 super-sandwich domain-containing protein, at 2,183,927 to 2,186,143 _RS08725 Position (kb) 2183 2184Strain fitness (log2 ratio) -2 -1 0 1at 2182.337 kb on - strand, within ABZR88_RS08715at 2182.578 kb on + strand, within ABZR88_RS08715at 2182.731 kb on - strand, within ABZR88_RS08715at 2183.003 kb on + strand, within ABZR88_RS08715at 2183.004 kb on - strand, within ABZR88_RS08715at 2183.193 kb on + strandat 2183.254 kb on + strandat 2183.264 kb on - strandat 2183.264 kb on - strandat 2183.264 kb on - strandat 2183.266 kb on - strandat 2183.419 kb on - strand, within ABZR88_RS08720at 2183.423 kb on + strand, within ABZR88_RS08720at 2183.424 kb on - strand, within ABZR88_RS08720at 2183.481 kb on - strand, within ABZR88_RS08720at 2183.532 kb on - strand, within ABZR88_RS08720at 2183.943 kb on + strandat 2183.948 kb on + strandat 2184.166 kb on + strand, within ABZR88_RS08725at 2184.182 kb on - strand, within ABZR88_RS08725at 2184.182 kb on - strand, within ABZR88_RS08725at 2184.182 kb on - strand, within ABZR88_RS08725at 2184.266 kb on + strand, within ABZR88_RS08725at 2184.318 kb on - strand, within ABZR88_RS08725at 2184.348 kb on - strand, within ABZR88_RS08725at 2184.553 kb on + strand, within ABZR88_RS08725at 2184.710 kb on - strand, within ABZR88_RS08725at 2184.737 kb on + strand, within ABZR88_RS08725at 2184.738 kb on - strand, within ABZR88_RS08725at 2184.777 kb on - strand, within ABZR88_RS08725at 2184.864 kb on + strand, within ABZR88_RS08725

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Per-strain Table

Position Strand Gene LocusTag Fraction Pullulan (C)
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2,182,337 - ABZR88_RS08715 0.41 -0.5
2,182,578 + ABZR88_RS08715 0.58 +1.1
2,182,731 - ABZR88_RS08715 0.68 +0.8
2,183,003 + ABZR88_RS08715 0.87 -0.0
2,183,004 - ABZR88_RS08715 0.87 +0.2
2,183,193 + -0.1
2,183,254 + +0.1
2,183,264 - -0.3
2,183,264 - -0.2
2,183,264 - +0.8
2,183,266 - -0.0
2,183,419 - ABZR88_RS08720 0.28 -2.2
2,183,423 + ABZR88_RS08720 0.28 -1.9
2,183,424 - ABZR88_RS08720 0.29 -0.9
2,183,481 - ABZR88_RS08720 0.37 -0.4
2,183,532 - ABZR88_RS08720 0.45 -0.3
2,183,943 + +0.2
2,183,948 + +0.7
2,184,166 + ABZR88_RS08725 0.11 +0.1
2,184,182 - ABZR88_RS08725 0.12 +1.1
2,184,182 - ABZR88_RS08725 0.12 -0.2
2,184,182 - ABZR88_RS08725 0.12 +0.1
2,184,266 + ABZR88_RS08725 0.15 -0.6
2,184,318 - ABZR88_RS08725 0.18 -0.1
2,184,348 - ABZR88_RS08725 0.19 -0.9
2,184,553 + ABZR88_RS08725 0.28 +0.6
2,184,710 - ABZR88_RS08725 0.35 -0.4
2,184,737 + ABZR88_RS08725 0.37 +0.0
2,184,738 - ABZR88_RS08725 0.37 -0.5
2,184,777 - ABZR88_RS08725 0.38 +0.6
2,184,864 + ABZR88_RS08725 0.42 +0.5

Or see this region's nucleotide sequence