Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS06825

Experiment: Pullulan (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS06815 and ABZR88_RS06820 are separated by 192 nucleotidesABZR88_RS06820 and ABZR88_RS06825 are separated by 6 nucleotidesABZR88_RS06825 and ABZR88_RS06830 are separated by 392 nucleotides ABZR88_RS06815: ABZR88_RS06815 - acyl-CoA reductase, at 1,669,747 to 1,670,772 _RS06815 ABZR88_RS06820: ABZR88_RS06820 - fructose-6-phosphate aldolase, at 1,670,965 to 1,671,168 _RS06820 ABZR88_RS06825: ABZR88_RS06825 - cell division ATP-binding protein FtsE, at 1,671,175 to 1,671,855 _RS06825 ABZR88_RS06830: ABZR88_RS06830 - nucleotide exchange factor GrpE, at 1,672,248 to 1,672,841 _RS06830 Position (kb) 1671 1672Strain fitness (log2 ratio) -1 0 1at 1670.212 kb on - strand, within ABZR88_RS06815at 1670.369 kb on + strand, within ABZR88_RS06815at 1670.434 kb on - strand, within ABZR88_RS06815at 1670.466 kb on + strand, within ABZR88_RS06815at 1670.642 kb on + strand, within ABZR88_RS06815at 1670.845 kb on - strandat 1670.870 kb on + strandat 1670.880 kb on + strandat 1670.939 kb on + strandat 1670.961 kb on - strandat 1671.187 kb on - strandat 1671.195 kb on - strandat 1671.259 kb on - strand, within ABZR88_RS06825at 1671.265 kb on - strand, within ABZR88_RS06825at 1671.312 kb on + strand, within ABZR88_RS06825at 1671.407 kb on + strand, within ABZR88_RS06825at 1671.495 kb on - strand, within ABZR88_RS06825at 1671.541 kb on - strand, within ABZR88_RS06825at 1671.719 kb on + strand, within ABZR88_RS06825at 1671.719 kb on + strand, within ABZR88_RS06825at 1671.930 kb on - strandat 1672.065 kb on - strandat 1672.070 kb on - strandat 1672.150 kb on - strandat 1672.165 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Pullulan (C)
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1,670,212 - ABZR88_RS06815 0.45 +0.3
1,670,369 + ABZR88_RS06815 0.61 -0.4
1,670,434 - ABZR88_RS06815 0.67 -0.1
1,670,466 + ABZR88_RS06815 0.70 -0.2
1,670,642 + ABZR88_RS06815 0.87 +0.1
1,670,845 - -0.1
1,670,870 + -0.8
1,670,880 + -0.5
1,670,939 + -0.3
1,670,961 - -0.8
1,671,187 - -0.3
1,671,195 - -0.5
1,671,259 - ABZR88_RS06825 0.12 -0.7
1,671,265 - ABZR88_RS06825 0.13 -0.7
1,671,312 + ABZR88_RS06825 0.20 -1.4
1,671,407 + ABZR88_RS06825 0.34 -0.2
1,671,495 - ABZR88_RS06825 0.47 -0.6
1,671,541 - ABZR88_RS06825 0.54 -1.2
1,671,719 + ABZR88_RS06825 0.80 -0.3
1,671,719 + ABZR88_RS06825 0.80 -0.8
1,671,930 - +0.2
1,672,065 - +0.4
1,672,070 - +0.0
1,672,150 - -0.2
1,672,165 - -0.2

Or see this region's nucleotide sequence