Experiment: Pullulan (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR88_RS03095 and ABZR88_RS03100 are separated by 195 nucleotides ABZR88_RS03100 and ABZR88_RS03105 are separated by 163 nucleotides ABZR88_RS03105 and ABZR88_RS03110 are separated by 100 nucleotides
ABZR88_RS03095: ABZR88_RS03095 - hypothetical protein, at 739,665 to 740,456
_RS03095
ABZR88_RS03100: ABZR88_RS03100 - hypothetical protein, at 740,652 to 741,137
_RS03100
ABZR88_RS03105: ABZR88_RS03105 - response regulator transcription factor, at 741,301 to 741,993
_RS03105
ABZR88_RS03110: ABZR88_RS03110 - TlpA disulfide reductase family protein, at 742,094 to 743,215
_RS03110
Position (kb) 741
742 Strain fitness (log2 ratio) -1
0
1
2 at 740.334 kb on + strand, within ABZR88_RS03095 at 740.456 kb on + strand at 740.528 kb on - strand at 740.550 kb on + strand at 740.633 kb on + strand at 740.634 kb on - strand at 740.637 kb on + strand at 740.652 kb on - strand at 740.842 kb on + strand, within ABZR88_RS03100 at 740.922 kb on - strand, within ABZR88_RS03100 at 740.928 kb on - strand, within ABZR88_RS03100 at 741.035 kb on + strand, within ABZR88_RS03100 at 741.047 kb on + strand, within ABZR88_RS03100 at 741.047 kb on + strand, within ABZR88_RS03100 at 741.047 kb on + strand, within ABZR88_RS03100 at 741.138 kb on + strand at 741.174 kb on - strand at 741.253 kb on + strand at 741.260 kb on - strand at 741.545 kb on + strand, within ABZR88_RS03105 at 741.678 kb on - strand, within ABZR88_RS03105 at 741.819 kb on + strand, within ABZR88_RS03105 at 741.819 kb on + strand, within ABZR88_RS03105 at 741.903 kb on - strand, within ABZR88_RS03105 at 742.035 kb on + strand at 742.359 kb on + strand, within ABZR88_RS03110 at 742.583 kb on - strand, within ABZR88_RS03110 at 742.911 kb on - strand, within ABZR88_RS03110
Per-strain Table
Position Strand Gene LocusTag Fraction Pullulan (C) remove 740,334 + ABZR88_RS03095 0.84 -0.0 740,456 + -0.2 740,528 - +0.3 740,550 + +1.8 740,633 + +0.9 740,634 - -0.4 740,637 + +0.6 740,652 - -1.2 740,842 + ABZR88_RS03100 0.39 -0.0 740,922 - ABZR88_RS03100 0.56 -1.4 740,928 - ABZR88_RS03100 0.57 -0.0 741,035 + ABZR88_RS03100 0.79 +0.2 741,047 + ABZR88_RS03100 0.81 +0.4 741,047 + ABZR88_RS03100 0.81 -0.7 741,047 + ABZR88_RS03100 0.81 -0.5 741,138 + +0.5 741,174 - -0.4 741,253 + -0.2 741,260 - +0.1 741,545 + ABZR88_RS03105 0.35 -1.1 741,678 - ABZR88_RS03105 0.54 +0.6 741,819 + ABZR88_RS03105 0.75 -1.7 741,819 + ABZR88_RS03105 0.75 -0.1 741,903 - ABZR88_RS03105 0.87 -0.7 742,035 + +0.8 742,359 + ABZR88_RS03110 0.24 +1.1 742,583 - ABZR88_RS03110 0.44 -1.2 742,911 - ABZR88_RS03110 0.73 +0.1
Or see this region's nucleotide sequence