Experiment: Pullulan (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR88_RS01620 and ABZR88_RS01625 are separated by 136 nucleotides ABZR88_RS01625 and ABZR88_RS01630 overlap by 4 nucleotides ABZR88_RS01630 and ABZR88_RS01635 are separated by 3 nucleotides ABZR88_RS01635 and ABZR88_RS01640 are separated by 30 nucleotides
ABZR88_RS01620: ABZR88_RS01620 - phosphoribosylamine--glycine ligase, at 372,277 to 373,551
_RS01620
ABZR88_RS01625: ABZR88_RS01625 - hypothetical protein, at 373,688 to 374,239
_RS01625
ABZR88_RS01630: ABZR88_RS01630 - phosphatase PAP2 family protein, at 374,236 to 374,916
_RS01630
ABZR88_RS01635: ABZR88_RS01635 - EamA family transporter, at 374,920 to 375,333
_RS01635
ABZR88_RS01640: ABZR88_RS01640 - tRNA-(ms[2]io[6]A)-hydroxylase, at 375,364 to 375,963
_RS01640
Position (kb) 374
375 Strain fitness (log2 ratio) -1
0
1
2 at 373.563 kb on + strand at 373.633 kb on - strand at 373.687 kb on + strand at 373.967 kb on - strand, within ABZR88_RS01625 at 373.980 kb on - strand, within ABZR88_RS01625 at 374.000 kb on - strand, within ABZR88_RS01625 at 374.005 kb on - strand, within ABZR88_RS01625 at 374.058 kb on - strand, within ABZR88_RS01625 at 374.384 kb on + strand, within ABZR88_RS01630 at 374.397 kb on - strand, within ABZR88_RS01630 at 374.517 kb on - strand, within ABZR88_RS01630 at 374.710 kb on + strand, within ABZR88_RS01630 at 374.804 kb on + strand, within ABZR88_RS01630 at 374.880 kb on + strand at 374.880 kb on + strand at 374.931 kb on + strand at 375.004 kb on + strand, within ABZR88_RS01635 at 375.237 kb on + strand, within ABZR88_RS01635 at 375.320 kb on + strand at 375.495 kb on - strand, within ABZR88_RS01640
Per-strain Table
Position Strand Gene LocusTag Fraction Pullulan (C) remove 373,563 + +0.4 373,633 - +0.1 373,687 + +0.1 373,967 - ABZR88_RS01625 0.51 -0.5 373,980 - ABZR88_RS01625 0.53 +0.1 374,000 - ABZR88_RS01625 0.57 +0.1 374,005 - ABZR88_RS01625 0.57 -0.2 374,058 - ABZR88_RS01625 0.67 +0.8 374,384 + ABZR88_RS01630 0.22 +0.7 374,397 - ABZR88_RS01630 0.24 +2.1 374,517 - ABZR88_RS01630 0.41 -0.6 374,710 + ABZR88_RS01630 0.70 -1.7 374,804 + ABZR88_RS01630 0.83 -0.4 374,880 + -0.6 374,880 + +0.5 374,931 + +0.2 375,004 + ABZR88_RS01635 0.20 -0.1 375,237 + ABZR88_RS01635 0.77 +0.2 375,320 + +0.1 375,495 - ABZR88_RS01640 0.22 +0.4
Or see this region's nucleotide sequence